RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
GPC1-207ENST00000466624 MRS2Q9HD23 443 aa21.35■■□□□ 1.01
GPC1-207ENST00000466624 FCHSD2O94868 740 aa21.34■■□□□ 1.01
GPC1-207ENST00000466624 HMOX1P09601 288 aa21.34■■□□□ 1.01
GPC1-207ENST00000466624 DDB1Q16531 1140 aa21.34■■□□□ 1.01
GPC1-207ENST00000466624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.34■■□□□ 1.01
GPC1-207ENST00000466624 A0A0G2JS52 829 aa21.33■■□□□ 1.01
GPC1-207ENST00000466624 EXOC5O00471 708 aa21.33■■□□□ 1.01
GPC1-207ENST00000466624 MYT1Q01538 1121 aa21.33■■□□□ 1.01
GPC1-207ENST00000466624 WDR43Q15061 677 aaKnown RBP eCLIP21.33■■□□□ 1.01
GPC1-207ENST00000466624 RSPH6AQ9H0K4 717 aa21.33■■□□□ 1.01
GPC1-207ENST00000466624 ZCRB1Q8TBF4 217 aaKnown RBP21.31■■□□□ 1
GPC1-207ENST00000466624 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
GPC1-207ENST00000466624 AMOTQ4VCS5 1084 aa21.3■■□□□ 1
GPC1-207ENST00000466624 MIER1Q8N108 512 aa21.3■■□□□ 1
GPC1-207ENST00000466624 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
GPC1-207ENST00000466624 SPG7Q9UQ90 795 aa21.3■■□□□ 1
GPC1-207ENST00000466624 PLEKHO1Q53GL0 409 aaPredicted RBP21.29■■□□□ 1
GPC1-207ENST00000466624 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
GPC1-207ENST00000466624 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
GPC1-207ENST00000466624 PRKAR2BP31323 418 aa21.28■■□□□ 1
GPC1-207ENST00000466624 PDE3BQ13370 1112 aa21.28■■□□□ 1
GPC1-207ENST00000466624 KRT27Q7Z3Y8 459 aa21.28■■□□□ 1
GPC1-207ENST00000466624 BCL9O00512 1426 aa21.27■■□□□ 1
GPC1-207ENST00000466624 PLEKHF1Q96S99 279 aa21.26■□□□□ 0.99
GPC1-207ENST00000466624 ADAMTS8Q9UP79 889 aa21.26■□□□□ 0.99
GPC1-207ENST00000466624 NEFMP07197 916 aa21.24■□□□□ 0.99
GPC1-207ENST00000466624 MARCH10Q8NA82 808 aaPredicted RBP21.24■□□□□ 0.99
GPC1-207ENST00000466624 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
GPC1-207ENST00000466624 SBF2Q86WG5 1849 aa21.24■□□□□ 0.99
GPC1-207ENST00000466624 CYP27B1O15528 508 aa21.23■□□□□ 0.99
GPC1-207ENST00000466624 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
GPC1-207ENST00000466624 DLG5Q8TDM6 1919 aa21.22■□□□□ 0.99
GPC1-207ENST00000466624 IFNL2Q8IZJ0 200 aa21.22■□□□□ 0.99
GPC1-207ENST00000466624 PHACTR3Q96KR7 559 aa21.22■□□□□ 0.99
GPC1-207ENST00000466624 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
GPC1-207ENST00000466624 PHKG2P15735 406 aa21.21■□□□□ 0.99
GPC1-207ENST00000466624 NKX1-1Q15270 411 aaPredicted RBP21.21■□□□□ 0.99
GPC1-207ENST00000466624 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
GPC1-207ENST00000466624 ZNF530Q6P9A1 599 aaPredicted RBP21.21■□□□□ 0.99
GPC1-207ENST00000466624 DDX54Q8TDD1 881 aaKnown RBP21.21■□□□□ 0.99
GPC1-207ENST00000466624 RUNDC1Q96C34 613 aa21.21■□□□□ 0.99
GPC1-207ENST00000466624 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
GPC1-207ENST00000466624 SCN11AQ9UI33 1791 aa21.2■□□□□ 0.99
GPC1-207ENST00000466624 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
GPC1-207ENST00000466624 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
GPC1-207ENST00000466624 AKAP4Q5JQC9 854 aa21.19■□□□□ 0.98
GPC1-207ENST00000466624 C1orf141Q5JVX7 400 aa21.19■□□□□ 0.98
GPC1-207ENST00000466624 FAM196AQ6ZSG2 479 aa21.19■□□□□ 0.98
GPC1-207ENST00000466624 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
GPC1-207ENST00000466624 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
GPC1-207ENST00000466624 ITGB4P16144 1822 aa21.16■□□□□ 0.98
GPC1-207ENST00000466624 MAP3K5Q99683 1374 aa21.16■□□□□ 0.98
GPC1-207ENST00000466624 ILDR2Q71H61 639 aa21.16■□□□□ 0.98
GPC1-207ENST00000466624 FAM9BQ8IZU0 186 aa21.16■□□□□ 0.98
GPC1-207ENST00000466624 NFE2L2Q16236 605 aa21.15■□□□□ 0.98
GPC1-207ENST00000466624 CCDC146Q8IYE0 955 aa21.15■□□□□ 0.98
GPC1-207ENST00000466624 DCAF5Q96JK2 942 aa21.15■□□□□ 0.98
GPC1-207ENST00000466624 KAT6BQ8WYB5 2073 aa21.15■□□□□ 0.98
GPC1-207ENST00000466624 GNAT3A8MTJ3 354 aa21.14■□□□□ 0.97
GPC1-207ENST00000466624 HTATSF1O43719 755 aaKnown RBP21.14■□□□□ 0.97
GPC1-207ENST00000466624 FAM182BQ5T319 152 aa21.14■□□□□ 0.97
GPC1-207ENST00000466624 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
GPC1-207ENST00000466624 TNS1Q9HBL0 1735 aaKnown RBP21.12■□□□□ 0.97
GPC1-207ENST00000466624 TMPOP42166 694 aaKnown RBP21.12■□□□□ 0.97
GPC1-207ENST00000466624 MRC1P22897 1456 aa21.12■□□□□ 0.97
GPC1-207ENST00000466624 EP400Q96L91 3159 aa21.11■□□□□ 0.97
GPC1-207ENST00000466624 SIPA1L3O60292 1781 aaPredicted RBP21.1■□□□□ 0.97
GPC1-207ENST00000466624 ERVV-2B6SEH9 535 aa21.1■□□□□ 0.97
GPC1-207ENST00000466624 NCBP3Q53F19 620 aaKnown RBP21.1■□□□□ 0.97
GPC1-207ENST00000466624 CEMIPQ8WUJ3 1361 aa21.1■□□□□ 0.97
GPC1-207ENST00000466624 BTAF1O14981 1849 aa21.09■□□□□ 0.97
GPC1-207ENST00000466624 RNMTO43148 476 aaKnown RBP21.09■□□□□ 0.97
GPC1-207ENST00000466624 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
GPC1-207ENST00000466624 APAF1O14727 1248 aa21.08■□□□□ 0.97
GPC1-207ENST00000466624 RIPK4P57078 832 aa21.08■□□□□ 0.97
GPC1-207ENST00000466624 LMOD3Q0VAK6 560 aa21.08■□□□□ 0.97
GPC1-207ENST00000466624 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
GPC1-207ENST00000466624 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
GPC1-207ENST00000466624 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
GPC1-207ENST00000466624 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
GPC1-207ENST00000466624 CCDC125Q86Z20 511 aa21.06■□□□□ 0.96
GPC1-207ENST00000466624 NGEFQ8N5V2 710 aa21.06■□□□□ 0.96
GPC1-207ENST00000466624 IL17REQ8NFR9 667 aa21.06■□□□□ 0.96
GPC1-207ENST00000466624 ACSBG1Q96GR2 724 aa21.06■□□□□ 0.96
GPC1-207ENST00000466624 LGR6Q9HBX8 967 aa21.06■□□□□ 0.96
GPC1-207ENST00000466624 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
GPC1-207ENST00000466624 KCNQ2O43526 872 aa21.04■□□□□ 0.96
GPC1-207ENST00000466624 TRIM37O94972 964 aa21.04■□□□□ 0.96
GPC1-207ENST00000466624 CCDC27Q2M243 656 aa21.04■□□□□ 0.96
GPC1-207ENST00000466624 SLC52A2Q9HAB3 445 aa21.04■□□□□ 0.96
GPC1-207ENST00000466624 RRP7AQ9Y3A4 280 aaKnown RBP21.04■□□□□ 0.96
GPC1-207ENST00000466624 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
GPC1-207ENST00000466624 CABP4P57796 275 aa21.03■□□□□ 0.96
GPC1-207ENST00000466624 TMOD3Q9NYL9 352 aa21.03■□□□□ 0.96
GPC1-207ENST00000466624 TRIM35Q9UPQ4 493 aa21.03■□□□□ 0.96
GPC1-207ENST00000466624 NEUROD2Q15784 382 aa21.02■□□□□ 0.96
GPC1-207ENST00000466624 MCM10Q7L590 875 aa21.02■□□□□ 0.96
GPC1-207ENST00000466624 SYTL4Q96C24 671 aaPredicted RBP21.02■□□□□ 0.96
GPC1-207ENST00000466624 TEFQ10587 303 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms