RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 KIF7Q2M1P5 1343 aa30.01■■■□□ 2.4
LIME1-203ENST00000465591 PPM1GO15355 546 aaPredicted RBP30.01■■■□□ 2.39
LIME1-203ENST00000465591 POLKQ9UBT6 870 aa30.01■■■□□ 2.39
LIME1-203ENST00000465591 TNNT2P45379 298 aaPredicted RBP30■■■□□ 2.39
LIME1-203ENST00000465591 ZCRB1Q8TBF4 217 aaKnown RBP29.98■■■□□ 2.39
LIME1-203ENST00000465591 ANO8Q9HCE9 1232 aaPredicted RBP29.98■■■□□ 2.39
LIME1-203ENST00000465591 WASHC2AQ641Q2 1341 aa29.97■■■□□ 2.39
LIME1-203ENST00000465591 DOT1LQ8TEK3 1739 aa29.97■■■□□ 2.39
LIME1-203ENST00000465591 NBPF14Q5TI25 921 aa29.97■■■□□ 2.39
LIME1-203ENST00000465591 TXNRD1Q16881 649 aa29.95■■■□□ 2.39
LIME1-203ENST00000465591 NCAPD2Q15021 1401 aa29.95■■■□□ 2.38
LIME1-203ENST00000465591 RAPGEF4Q8WZA2 1011 aa29.94■■■□□ 2.38
LIME1-203ENST00000465591 NSD2O96028 1365 aa29.92■■■□□ 2.38
LIME1-203ENST00000465591 TATP17735 454 aaPredicted RBP29.91■■■□□ 2.38
LIME1-203ENST00000465591 PKD1L3Q7Z443 1732 aa29.89■■■□□ 2.38
LIME1-203ENST00000465591 EYA1Q99502 592 aa29.89■■■□□ 2.38
LIME1-203ENST00000465591 PRIM1P49642 420 aaKnown RBP29.88■■■□□ 2.37
LIME1-203ENST00000465591 KNSTRNQ9Y448 316 aa29.88■■■□□ 2.37
LIME1-203ENST00000465591 EIF4A2Q14240 407 aaKnown RBP29.87■■■□□ 2.37
LIME1-203ENST00000465591 CASZ1Q86V15 1759 aa29.86■■■□□ 2.37
LIME1-203ENST00000465591 AMER1Q5JTC6 1135 aaPredicted RBP29.86■■■□□ 2.37
LIME1-203ENST00000465591 MORC1Q86VD1 984 aa29.86■■■□□ 2.37
LIME1-203ENST00000465591 PAPPAQ13219 1627 aa29.85■■■□□ 2.37
LIME1-203ENST00000465591 SYTL4Q96C24 671 aaPredicted RBP29.85■■■□□ 2.37
LIME1-203ENST00000465591 PDGFDQ9GZP0 370 aaPredicted RBP29.84■■■□□ 2.37
LIME1-203ENST00000465591 CYP27B1O15528 508 aa29.83■■■□□ 2.37
LIME1-203ENST00000465591 TOGARAM1Q9Y4F4 1720 aa29.82■■■□□ 2.36
LIME1-203ENST00000465591 PCDH11XQ9BZA7 1347 aa29.82■■■□□ 2.36
LIME1-203ENST00000465591 PCDH11YQ9BZA8 1340 aa29.82■■■□□ 2.36
LIME1-203ENST00000465591 LRRC4BQ9NT99 713 aa29.82■■■□□ 2.36
LIME1-203ENST00000465591 PER1O15534 1290 aaPredicted RBP29.81■■■□□ 2.36
LIME1-203ENST00000465591 LY75O60449 1722 aa29.8■■■□□ 2.36
LIME1-203ENST00000465591 SLC15A2Q16348 729 aa29.79■■■□□ 2.36
LIME1-203ENST00000465591 STK32BQ9NY57 414 aa29.79■■■□□ 2.36
LIME1-203ENST00000465591 ITGB4P16144 1822 aa29.78■■■□□ 2.36
LIME1-203ENST00000465591 IGSF1Q8N6C5 1336 aa29.76■■■□□ 2.36
LIME1-203ENST00000465591 KCNQ4P56696 695 aa29.76■■■□□ 2.35
LIME1-203ENST00000465591 ZNF827Q17R98 1081 aa29.74■■■□□ 2.35
LIME1-203ENST00000465591 SPON1Q9HCB6 807 aa29.72■■■□□ 2.35
LIME1-203ENST00000465591 SPG7Q9UQ90 795 aa29.72■■■□□ 2.35
LIME1-203ENST00000465591 SLC27A3Q5K4L6 730 aa29.71■■■□□ 2.35
LIME1-203ENST00000465591 CC2D1BQ5T0F9 858 aaKnown RBP29.71■■■□□ 2.35
LIME1-203ENST00000465591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.71■■■□□ 2.35
LIME1-203ENST00000465591 NKX1-1Q15270 411 aaPredicted RBP29.7■■■□□ 2.35
LIME1-203ENST00000465591 TUBGCP6Q96RT7 1819 aa29.7■■■□□ 2.34
LIME1-203ENST00000465591 ZBTB7AO95365 584 aa29.69■■■□□ 2.34
LIME1-203ENST00000465591 MPRIPQ6WCQ1 1025 aa29.68■■■□□ 2.34
LIME1-203ENST00000465591 AEBP1Q8IUX7 1158 aa29.68■■■□□ 2.34
LIME1-203ENST00000465591 AKT1S1Q96B36 256 aa29.68■■■□□ 2.34
LIME1-203ENST00000465591 PHKG2P15735 406 aa29.66■■■□□ 2.34
LIME1-203ENST00000465591 IL13P35225 146 aa29.66■■■□□ 2.34
LIME1-203ENST00000465591 QSER1Q2KHR3 1735 aa29.65■■■□□ 2.34
LIME1-203ENST00000465591 MTHFSP49914 203 aa29.65■■■□□ 2.34
LIME1-203ENST00000465591 CCNL1Q9UK58 526 aaPredicted RBP29.64■■■□□ 2.34
LIME1-203ENST00000465591 CNGB1Q14028 1251 aaPredicted RBP29.63■■■□□ 2.33
LIME1-203ENST00000465591 IFNL2Q8IZJ0 200 aa29.63■■■□□ 2.33
LIME1-203ENST00000465591 PIGBQ92521 554 aa29.63■■■□□ 2.33
LIME1-203ENST00000465591 ATF5Q9Y2D1 282 aaPredicted RBP29.63■■■□□ 2.33
LIME1-203ENST00000465591 PLEKHG2Q9H7P9 1386 aa29.63■■■□□ 2.33
LIME1-203ENST00000465591 NPC1L1Q9UHC9 1359 aa29.63■■■□□ 2.33
LIME1-203ENST00000465591 PTGER2P43116 358 aa29.62■■■□□ 2.33
LIME1-203ENST00000465591 PALLDQ8WX93 1383 aa29.62■■■□□ 2.33
LIME1-203ENST00000465591 TAF1LQ8IZX4 1826 aa29.61■■■□□ 2.33
LIME1-203ENST00000465591 C5P01031 1676 aa29.6■■■□□ 2.33
LIME1-203ENST00000465591 SULT6B1Q6IMI4 303 aa29.6■■■□□ 2.33
LIME1-203ENST00000465591 KDRP35968 1356 aa29.6■■■□□ 2.33
LIME1-203ENST00000465591 PNPLA7Q6ZV29 1317 aa29.58■■■□□ 2.33
LIME1-203ENST00000465591 PPP1R1BQ9UD71 204 aaPredicted RBP29.58■■■□□ 2.33
LIME1-203ENST00000465591 MTFR1LQ9H019 292 aa29.57■■■□□ 2.32
LIME1-203ENST00000465591 PLEKHO1Q53GL0 409 aaPredicted RBP29.56■■■□□ 2.32
LIME1-203ENST00000465591 SGIP1Q9BQI5 828 aa29.56■■■□□ 2.32
LIME1-203ENST00000465591 ZNF530Q6P9A1 599 aaPredicted RBP29.55■■■□□ 2.32
LIME1-203ENST00000465591 KDM6AO15550 1401 aaPredicted RBP29.54■■■□□ 2.32
LIME1-203ENST00000465591 TMOD3Q9NYL9 352 aa29.54■■■□□ 2.32
LIME1-203ENST00000465591 TFCP2L1Q9NZI6 479 aa29.54■■■□□ 2.32
LIME1-203ENST00000465591 COL3A1P02461 1466 aaPredicted RBP29.54■■■□□ 2.32
LIME1-203ENST00000465591 SMARCC1Q92922 1105 aaPredicted RBP29.53■■■□□ 2.32
LIME1-203ENST00000465591 ASAP1Q9ULH1 1129 aa29.53■■■□□ 2.32
LIME1-203ENST00000465591 AMOTQ4VCS5 1084 aa29.52■■■□□ 2.32
LIME1-203ENST00000465591 COL24A1Q17RW2 1714 aa29.51■■■□□ 2.31
LIME1-203ENST00000465591 HMOX1P09601 288 aa29.5■■■□□ 2.31
LIME1-203ENST00000465591 C4BP0C0L5 1744 aa29.5■■■□□ 2.31
LIME1-203ENST00000465591 DIAPH1O60610 1272 aaKnown RBP29.49■■■□□ 2.31
LIME1-203ENST00000465591 DCAF5Q96JK2 942 aa29.49■■■□□ 2.31
LIME1-203ENST00000465591 ATG3Q9NT62 314 aa29.48■■■□□ 2.31
LIME1-203ENST00000465591 HSP90AB1P08238 724 aaKnown RBP29.47■■■□□ 2.31
LIME1-203ENST00000465591 LOC102724428A0A0B4J2F2 783 aa29.46■■■□□ 2.31
LIME1-203ENST00000465591 ERVV-2B6SEH9 535 aa29.46■■■□□ 2.31
LIME1-203ENST00000465591 SIK1P57059 783 aa29.46■■■□□ 2.31
LIME1-203ENST00000465591 COL23A1Q86Y22 540 aaPredicted RBP29.46■■■□□ 2.31
LIME1-203ENST00000465591 SCN11AQ9UI33 1791 aa29.46■■■□□ 2.31
LIME1-203ENST00000465591 AMIGO3Q86WK7 504 aa29.45■■■□□ 2.31
LIME1-203ENST00000465591 SLC16A10Q8TF71 515 aa29.45■■■□□ 2.31
LIME1-203ENST00000465591 UBR3Q6ZT12 1888 aa29.44■■■□□ 2.3
LIME1-203ENST00000465591 C1orf141Q5JVX7 400 aa29.44■■■□□ 2.3
LIME1-203ENST00000465591 VIRMAQ69YN4 1812 aaKnown RBP29.43■■■□□ 2.3
LIME1-203ENST00000465591 ITPK1Q13572 414 aa29.43■■■□□ 2.3
LIME1-203ENST00000465591 LINC00116Q8NCU8 138 aa29.43■■■□□ 2.3
LIME1-203ENST00000465591 SMIM5Q71RC9 77 aa29.42■■■□□ 2.3
LIME1-203ENST00000465591 FHDC1Q9C0D6 1143 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms