RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ZNF526Q8TF50 670 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-215ENST00000465457 C5P01031 1676 aa19.11■□□□□ 0.65
HDAC6-215ENST00000465457 EVC2Q86UK5 1308 aa19.11■□□□□ 0.65
HDAC6-215ENST00000465457 MSL1Q68DK7 614 aa19.11■□□□□ 0.65
HDAC6-215ENST00000465457 CD163L1Q9NR16 1453 aa19.1■□□□□ 0.65
HDAC6-215ENST00000465457 SLC27A3Q5K4L6 730 aa19.1■□□□□ 0.65
HDAC6-215ENST00000465457 ANKRD24Q8TF21 1146 aa19.1■□□□□ 0.65
HDAC6-215ENST00000465457 TAF1LQ8IZX4 1826 aa19.09■□□□□ 0.65
HDAC6-215ENST00000465457 HSPA6P17066 643 aa19.09■□□□□ 0.65
HDAC6-215ENST00000465457 NME9Q86XW9 330 aa19.09■□□□□ 0.65
HDAC6-215ENST00000465457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.09■□□□□ 0.65
HDAC6-215ENST00000465457 MIER1Q8N108 512 aa19.09■□□□□ 0.65
HDAC6-215ENST00000465457 USP31Q70CQ4 1352 aa19.08■□□□□ 0.65
HDAC6-215ENST00000465457 DDX54Q8TDD1 881 aaKnown RBP19.08■□□□□ 0.64
HDAC6-215ENST00000465457 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.64
HDAC6-215ENST00000465457 USP47Q96K76 1375 aa19.07■□□□□ 0.64
HDAC6-215ENST00000465457 GRIN3BO60391 1043 aa19.07■□□□□ 0.64
HDAC6-215ENST00000465457 COL23A1Q86Y22 540 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-215ENST00000465457 SYTL4Q96C24 671 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-215ENST00000465457 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-215ENST00000465457 GPBP1L1Q9HC44 474 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-215ENST00000465457 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
HDAC6-215ENST00000465457 WWC3Q9ULE0 1092 aa19.06■□□□□ 0.64
HDAC6-215ENST00000465457 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
HDAC6-215ENST00000465457 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
HDAC6-215ENST00000465457 MEGF6O75095 1541 aa19.05■□□□□ 0.64
HDAC6-215ENST00000465457 MSH5O43196 834 aa19.04■□□□□ 0.64
HDAC6-215ENST00000465457 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
HDAC6-215ENST00000465457 DDX10Q13206 875 aaKnown RBP19.03■□□□□ 0.64
HDAC6-215ENST00000465457 CCNL1Q9UK58 526 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-215ENST00000465457 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.64
HDAC6-215ENST00000465457 CARD11Q9BXL7 1154 aa19.02■□□□□ 0.64
HDAC6-215ENST00000465457 UBR3Q6ZT12 1888 aa19■□□□□ 0.63
HDAC6-215ENST00000465457 WASHC2AQ641Q2 1341 aa19■□□□□ 0.63
HDAC6-215ENST00000465457 C4BP0C0L5 1744 aa18.98■□□□□ 0.63
HDAC6-215ENST00000465457 KIF3CO14782 793 aa18.98■□□□□ 0.63
HDAC6-215ENST00000465457 AMIGO3Q86WK7 504 aa18.98■□□□□ 0.63
HDAC6-215ENST00000465457 CICQ96RK0 1608 aaPredicted RBP18.96■□□□□ 0.63
HDAC6-215ENST00000465457 ITGB4P16144 1822 aa18.96■□□□□ 0.63
HDAC6-215ENST00000465457 SMIM5Q71RC9 77 aa18.96■□□□□ 0.63
HDAC6-215ENST00000465457 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
HDAC6-215ENST00000465457 KIAA1551Q9HCM1 1747 aa18.96■□□□□ 0.63
HDAC6-215ENST00000465457 ANP32CO43423 234 aa18.95■□□□□ 0.62
HDAC6-215ENST00000465457 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-215ENST00000465457 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
HDAC6-215ENST00000465457 A0A1W2PP64 1363 aa18.94■□□□□ 0.62
HDAC6-215ENST00000465457 WDR90Q96KV7 1748 aa18.94■□□□□ 0.62
HDAC6-215ENST00000465457 EDC4Q6P2E9 1401 aaKnown RBP18.94■□□□□ 0.62
HDAC6-215ENST00000465457 FBLN1P23142 703 aa18.94■□□□□ 0.62
HDAC6-215ENST00000465457 IP6K1Q92551 441 aa18.94■□□□□ 0.62
HDAC6-215ENST00000465457 N4BP2Q86UW6 1770 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-215ENST00000465457 KIF7Q2M1P5 1343 aa18.92■□□□□ 0.62
HDAC6-215ENST00000465457 CCER2I3L3R5 266 aa18.91■□□□□ 0.62
HDAC6-215ENST00000465457 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
HDAC6-215ENST00000465457 SLC12A5Q9H2X9 1139 aa18.91■□□□□ 0.62
HDAC6-215ENST00000465457 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
HDAC6-215ENST00000465457 MAP3K19Q56UN5 1328 aa18.9■□□□□ 0.62
HDAC6-215ENST00000465457 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
HDAC6-215ENST00000465457 KIF13BQ9NQT8 1826 aa18.89■□□□□ 0.61
HDAC6-215ENST00000465457 HOXC9P31274 260 aa18.89■□□□□ 0.61
HDAC6-215ENST00000465457 USHBP1Q8N6Y0 703 aa18.89■□□□□ 0.61
HDAC6-215ENST00000465457 DNAJC5GQ8N7S2 189 aa18.89■□□□□ 0.61
HDAC6-215ENST00000465457 PALLDQ8WX93 1383 aa18.89■□□□□ 0.61
HDAC6-215ENST00000465457 PHF14O94880 888 aa18.87■□□□□ 0.61
HDAC6-215ENST00000465457 PCNTO95613 3336 aa18.87■□□□□ 0.61
HDAC6-215ENST00000465457 SLC24A1O60721 1099 aa18.86■□□□□ 0.61
HDAC6-215ENST00000465457 BRCA1P38398 1863 aaKnown RBP18.86■□□□□ 0.61
HDAC6-215ENST00000465457 ST20-MTHFSA0A0A6YYL1 179 aa18.85■□□□□ 0.61
HDAC6-215ENST00000465457 APLP1P51693 650 aa18.85■□□□□ 0.61
HDAC6-215ENST00000465457 HTRA3P83110 453 aa18.85■□□□□ 0.61
HDAC6-215ENST00000465457 HDGFL2Q7Z4V5 671 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-215ENST00000465457 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
HDAC6-215ENST00000465457 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
HDAC6-215ENST00000465457 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
HDAC6-215ENST00000465457 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.61
HDAC6-215ENST00000465457 CAPN15O75808 1086 aa18.83■□□□□ 0.6
HDAC6-215ENST00000465457 COL13A1Q5TAT6 717 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-215ENST00000465457 NMRK2Q9NPI5 230 aa18.82■□□□□ 0.6
HDAC6-215ENST00000465457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.81■□□□□ 0.6
HDAC6-215ENST00000465457 AMPHP49418 695 aa18.81■□□□□ 0.6
HDAC6-215ENST00000465457 MPRIPQ6WCQ1 1025 aa18.81■□□□□ 0.6
HDAC6-215ENST00000465457 AK7Q96M32 723 aa18.81■□□□□ 0.6
HDAC6-215ENST00000465457 RRS1Q15050 365 aaKnown RBP18.8■□□□□ 0.6
HDAC6-215ENST00000465457 FLAD1Q8NFF5 587 aa18.8■□□□□ 0.6
HDAC6-215ENST00000465457 CYP27B1O15528 508 aa18.78■□□□□ 0.6
HDAC6-215ENST00000465457 TOMM70O94826 608 aa18.78■□□□□ 0.6
HDAC6-215ENST00000465457 TMF1P82094 1093 aa18.78■□□□□ 0.6
HDAC6-215ENST00000465457 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
HDAC6-215ENST00000465457 LINC00116Q8NCU8 138 aa18.78■□□□□ 0.6
HDAC6-215ENST00000465457 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
HDAC6-215ENST00000465457 RTL1A6NKG5 1358 aa18.78■□□□□ 0.6
HDAC6-215ENST00000465457 COG3Q96JB2 828 aa18.77■□□□□ 0.6
HDAC6-215ENST00000465457 ARFGEF1Q9Y6D6 1849 aa18.77■□□□□ 0.59
HDAC6-215ENST00000465457 PCDH11XQ9BZA7 1347 aa18.76■□□□□ 0.59
HDAC6-215ENST00000465457 PCDH11YQ9BZA8 1340 aa18.76■□□□□ 0.59
HDAC6-215ENST00000465457 RAPGEF4Q8WZA2 1011 aa18.76■□□□□ 0.59
HDAC6-215ENST00000465457 KIF20BQ96Q89 1820 aa18.76■□□□□ 0.59
HDAC6-215ENST00000465457 TESK2Q96S53 571 aa18.75■□□□□ 0.59
HDAC6-215ENST00000465457 C10orf71Q711Q0 1435 aa18.74■□□□□ 0.59
HDAC6-215ENST00000465457 BCS1LQ9Y276 419 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms