RNA–Protein interactions for RNA: ENST00000465117.5

PLXNB1-208, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 627 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-208ENST00000465117 SHANK3Q9BYB0 1731 aa18.56■□□□□ 0.56
PLXNB1-208ENST00000465117 PARP4Q9UKK3 1724 aaKnown RBP18.56■□□□□ 0.56
PLXNB1-208ENST00000465117 RGS12O14924 1447 aa18.56■□□□□ 0.56
PLXNB1-208ENST00000465117 FCHSD2O94868 740 aa18.55■□□□□ 0.56
PLXNB1-208ENST00000465117 TATP17735 454 aaPredicted RBP18.55■□□□□ 0.56
PLXNB1-208ENST00000465117 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
PLXNB1-208ENST00000465117 SEPT12Q8IYM1 358 aa18.55■□□□□ 0.56
PLXNB1-208ENST00000465117 RAPGEF4Q8WZA2 1011 aa18.55■□□□□ 0.56
PLXNB1-208ENST00000465117 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
PLXNB1-208ENST00000465117 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
PLXNB1-208ENST00000465117 BRWD3Q6RI45 1802 aa18.52■□□□□ 0.56
PLXNB1-208ENST00000465117 CDCA7Q9BWT1 371 aaPredicted RBP18.52■□□□□ 0.56
PLXNB1-208ENST00000465117 TNS2Q63HR2 1409 aa18.51■□□□□ 0.55
PLXNB1-208ENST00000465117 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
PLXNB1-208ENST00000465117 SENP3-EIF4A1A0A087X0R7 540 aa18.5■□□□□ 0.55
PLXNB1-208ENST00000465117 A0A0G2JS52 829 aa18.5■□□□□ 0.55
PLXNB1-208ENST00000465117 CYP27B1O15528 508 aa18.5■□□□□ 0.55
PLXNB1-208ENST00000465117 MYT1Q01538 1121 aa18.5■□□□□ 0.55
PLXNB1-208ENST00000465117 DDB1Q16531 1140 aa18.5■□□□□ 0.55
PLXNB1-208ENST00000465117 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
PLXNB1-208ENST00000465117 EXOC5O00471 708 aa18.49■□□□□ 0.55
PLXNB1-208ENST00000465117 FAM182BQ5T319 152 aa18.49■□□□□ 0.55
PLXNB1-208ENST00000465117 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
PLXNB1-208ENST00000465117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.49■□□□□ 0.551e-8■□□□□ 9.1
PLXNB1-208ENST00000465117 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
PLXNB1-208ENST00000465117 RUNDC1Q96C34 613 aa18.48■□□□□ 0.55
PLXNB1-208ENST00000465117 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
PLXNB1-208ENST00000465117 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
PLXNB1-208ENST00000465117 PHKG2P15735 406 aa18.46■□□□□ 0.55
PLXNB1-208ENST00000465117 AMOTQ4VCS5 1084 aa18.46■□□□□ 0.55
PLXNB1-208ENST00000465117 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
PLXNB1-208ENST00000465117 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
PLXNB1-208ENST00000465117 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
PLXNB1-208ENST00000465117 APAF1O14727 1248 aa18.44■□□□□ 0.54
PLXNB1-208ENST00000465117 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
PLXNB1-208ENST00000465117 PCDH11XQ9BZA7 1347 aa18.44■□□□□ 0.54
PLXNB1-208ENST00000465117 PCDH11YQ9BZA8 1340 aa18.44■□□□□ 0.54
PLXNB1-208ENST00000465117 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
PLXNB1-208ENST00000465117 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
PLXNB1-208ENST00000465117 NFE2L2Q16236 605 aa18.43■□□□□ 0.54
PLXNB1-208ENST00000465117 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
PLXNB1-208ENST00000465117 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
PLXNB1-208ENST00000465117 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
PLXNB1-208ENST00000465117 NKX1-1Q15270 411 aaPredicted RBP18.42■□□□□ 0.54
PLXNB1-208ENST00000465117 IFNL2Q8IZJ0 200 aa18.42■□□□□ 0.54
PLXNB1-208ENST00000465117 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
PLXNB1-208ENST00000465117 DLG5Q8TDM6 1919 aa18.42■□□□□ 0.54
PLXNB1-208ENST00000465117 TOGARAM1Q9Y4F4 1720 aa18.42■□□□□ 0.54
PLXNB1-208ENST00000465117 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
PLXNB1-208ENST00000465117 ILDR2Q71H61 639 aa18.41■□□□□ 0.54
PLXNB1-208ENST00000465117 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
PLXNB1-208ENST00000465117 DCTN1Q14203 1278 aa18.4■□□□□ 0.54
PLXNB1-208ENST00000465117 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
PLXNB1-208ENST00000465117 ADAMTS7Q9UKP4 1686 aa18.4■□□□□ 0.54
PLXNB1-208ENST00000465117 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
PLXNB1-208ENST00000465117 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
PLXNB1-208ENST00000465117 PTF1AQ7RTS3 328 aa18.39■□□□□ 0.53
PLXNB1-208ENST00000465117 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
PLXNB1-208ENST00000465117 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
PLXNB1-208ENST00000465117 GNAT3A8MTJ3 354 aa18.38■□□□□ 0.53
PLXNB1-208ENST00000465117 RIPK4P57078 832 aa18.38■□□□□ 0.53
PLXNB1-208ENST00000465117 C1orf141Q5JVX7 400 aa18.38■□□□□ 0.53
PLXNB1-208ENST00000465117 NEFMP07197 916 aa18.37■□□□□ 0.53
PLXNB1-208ENST00000465117 MCM10Q7L590 875 aa18.37■□□□□ 0.53
PLXNB1-208ENST00000465117 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
PLXNB1-208ENST00000465117 BCL9O00512 1426 aa18.37■□□□□ 0.53
PLXNB1-208ENST00000465117 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
PLXNB1-208ENST00000465117 RNMTO43148 476 aaKnown RBP18.36■□□□□ 0.53
PLXNB1-208ENST00000465117 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
PLXNB1-208ENST00000465117 SCN11AQ9UI33 1791 aa18.36■□□□□ 0.53
PLXNB1-208ENST00000465117 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
PLXNB1-208ENST00000465117 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
PLXNB1-208ENST00000465117 KCNQ2O43526 872 aa18.35■□□□□ 0.53
PLXNB1-208ENST00000465117 DCAF5Q96JK2 942 aa18.35■□□□□ 0.53
PLXNB1-208ENST00000465117 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
PLXNB1-208ENST00000465117 CEMIPQ8WUJ3 1361 aa18.34■□□□□ 0.53
PLXNB1-208ENST00000465117 EP400Q96L91 3159 aa18.34■□□□□ 0.53
PLXNB1-208ENST00000465117 HSP90AB1P08238 724 aaKnown RBP18.33■□□□□ 0.52
PLXNB1-208ENST00000465117 PRIM1P49642 420 aaKnown RBP18.33■□□□□ 0.52
PLXNB1-208ENST00000465117 FAM196AQ6ZSG2 479 aa18.33■□□□□ 0.52
PLXNB1-208ENST00000465117 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
PLXNB1-208ENST00000465117 ITGB4P16144 1822 aa18.32■□□□□ 0.52
PLXNB1-208ENST00000465117 MRC1P22897 1456 aa18.32■□□□□ 0.52
PLXNB1-208ENST00000465117 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
PLXNB1-208ENST00000465117 SIPA1L3O60292 1781 aaPredicted RBP18.3■□□□□ 0.52
PLXNB1-208ENST00000465117 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
PLXNB1-208ENST00000465117 WWC1Q8IX03 1113 aa18.3■□□□□ 0.52
PLXNB1-208ENST00000465117 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
PLXNB1-208ENST00000465117 PIGBQ92521 554 aa18.3■□□□□ 0.52
PLXNB1-208ENST00000465117 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
PLXNB1-208ENST00000465117 TRIM37O94972 964 aa18.29■□□□□ 0.52
PLXNB1-208ENST00000465117 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
PLXNB1-208ENST00000465117 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
PLXNB1-208ENST00000465117 SLC52A2Q9HAB3 445 aa18.29■□□□□ 0.52
PLXNB1-208ENST00000465117 ZNF521Q96K83 1311 aa18.28■□□□□ 0.52
PLXNB1-208ENST00000465117 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
PLXNB1-208ENST00000465117 CABP4P57796 275 aa18.27■□□□□ 0.52
PLXNB1-208ENST00000465117 HNRNPUQ00839 825 aaKnown RBP eCLIP18.27■□□□□ 0.52
PLXNB1-208ENST00000465117 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
PLXNB1-208ENST00000465117 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms