RNA–Protein interactions for RNA: ENST00000464520.1

ABCA2-211, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-211	ENST00000464520	MEGF6	O75095	1541 aa		33.63	■■■□□ 2.97
ABCA2-211	ENST00000464520	MAP2	P11137	1827 aa	Known RBP	33.62	■■■□□ 2.97
ABCA2-211	ENST00000464520	PER1	O15534	1290 aa	Predicted RBP	33.61	■■■□□ 2.97
ABCA2-211	ENST00000464520	RGPD2	P0DJD1	1756 aa		33.6	■■■□□ 2.97
ABCA2-211	ENST00000464520	PROM2	Q8N271	834 aa		33.59	■■■□□ 2.97
ABCA2-211	ENST00000464520	EYA1	Q99502	592 aa		33.59	■■■□□ 2.97
ABCA2-211	ENST00000464520	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.59	■■■□□ 2.97
ABCA2-211	ENST00000464520	RGPD4	Q7Z3J3	1758 aa		33.59	■■■□□ 2.97
ABCA2-211	ENST00000464520	RREB1	Q92766	1687 aa		33.58	■■■□□ 2.97
ABCA2-211	ENST00000464520	NCAPD2	Q15021	1401 aa		33.57	■■■□□ 2.96
ABCA2-211	ENST00000464520	TXNRD1	Q16881	649 aa		33.57	■■■□□ 2.96
ABCA2-211	ENST00000464520	EIF4A2	Q14240	407 aa	Known RBP	33.56	■■■□□ 2.96
ABCA2-211	ENST00000464520	NHS	Q6T4R5	1651 aa		33.55	■■■□□ 2.96
ABCA2-211	ENST00000464520	PCDH11X	Q9BZA7	1347 aa		33.54	■■■□□ 2.96
ABCA2-211	ENST00000464520	PCDH11Y	Q9BZA8	1340 aa		33.54	■■■□□ 2.96
ABCA2-211	ENST00000464520	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.53	■■■□□ 2.96
ABCA2-211	ENST00000464520	PRIM1	P49642	420 aa	Known RBP	33.52	■■■□□ 2.96
ABCA2-211	ENST00000464520	SPG7	Q9UQ90	795 aa		33.51	■■■□□ 2.95
ABCA2-211	ENST00000464520	KAT6B	Q8WYB5	2073 aa		33.51	■■■□□ 2.95
ABCA2-211	ENST00000464520	NUP188	Q5SRE5	1749 aa		33.5	■■■□□ 2.95
ABCA2-211	ENST00000464520	NPC1L1	Q9UHC9	1359 aa		33.49	■■■□□ 2.95
ABCA2-211	ENST00000464520	PLEKHG2	Q9H7P9	1386 aa		33.48	■■■□□ 2.95
ABCA2-211	ENST00000464520	SYTL4	Q96C24	671 aa	Predicted RBP	33.48	■■■□□ 2.95
ABCA2-211	ENST00000464520	CYP27B1	O15528	508 aa		33.46	■■■□□ 2.95
ABCA2-211	ENST00000464520	IGSF1	Q8N6C5	1336 aa		33.46	■■■□□ 2.95
ABCA2-211	ENST00000464520	NKX1-1	Q15270	411 aa	Predicted RBP	33.43	■■■□□ 2.94
ABCA2-211	ENST00000464520	SLC27A3	Q5K4L6	730 aa		33.43	■■■□□ 2.94
ABCA2-211	ENST00000464520	CC2D1B	Q5T0F9	858 aa	Known RBP	33.43	■■■□□ 2.94
ABCA2-211	ENST00000464520	STK32B	Q9NY57	414 aa		33.43	■■■□□ 2.94
ABCA2-211	ENST00000464520	SHANK3	Q9BYB0	1731 aa		33.42	■■■□□ 2.94
ABCA2-211	ENST00000464520	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.42	■■■□□ 2.94
ABCA2-211	ENST00000464520	MTHFS	P49914	203 aa		33.4	■■■□□ 2.94
ABCA2-211	ENST00000464520	BTAF1	O14981	1849 aa		33.39	■■■□□ 2.94
ABCA2-211	ENST00000464520	SLC15A2	Q16348	729 aa		33.39	■■■□□ 2.94
ABCA2-211	ENST00000464520	IL13	P35225	146 aa		33.38	■■■□□ 2.93
ABCA2-211	ENST00000464520	IFNL2	Q8IZJ0	200 aa		33.38	■■■□□ 2.93
ABCA2-211	ENST00000464520	LRP5	O75197	1615 aa		33.38	■■■□□ 2.93
ABCA2-211	ENST00000464520	HMGB2	P26583	209 aa	Known RBP	33.36	■■■□□ 2.93
ABCA2-211	ENST00000464520	AMOT	Q4VCS5	1084 aa		33.35	■■■□□ 2.93
ABCA2-211	ENST00000464520	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.35	■■■□□ 2.93
ABCA2-211	ENST00000464520	LRRC4B	Q9NT99	713 aa		33.35	■■■□□ 2.93
ABCA2-211	ENST00000464520	PKD1L3	Q7Z443	1732 aa		33.34	■■■□□ 2.93
ABCA2-211	ENST00000464520	PHKG2	P15735	406 aa		33.33	■■■□□ 2.93
ABCA2-211	ENST00000464520	DOT1L	Q8TEK3	1739 aa		33.32	■■■□□ 2.92
ABCA2-211	ENST00000464520	SPON1	Q9HCB6	807 aa		33.32	■■■□□ 2.92
ABCA2-211	ENST00000464520	MPRIP	Q6WCQ1	1025 aa		33.31	■■■□□ 2.92
ABCA2-211	ENST00000464520	SULT6B1	Q6IMI4	303 aa		33.3	■■■□□ 2.92
ABCA2-211	ENST00000464520	HSP90AB1	P08238	724 aa	Known RBP	33.29	■■■□□ 2.92
ABCA2-211	ENST00000464520	SMARCC1	Q92922	1105 aa	Predicted RBP	33.29	■■■□□ 2.92
ABCA2-211	ENST00000464520	KDR	P35968	1356 aa		33.29	■■■□□ 2.92
ABCA2-211	ENST00000464520	DIAPH1	O60610	1272 aa	Known RBP	33.27	■■■□□ 2.92
ABCA2-211	ENST00000464520	AEBP1	Q8IUX7	1158 aa		33.26	■■■□□ 2.91
ABCA2-211	ENST00000464520	CCNL1	Q9UK58	526 aa	Predicted RBP	33.26	■■■□□ 2.91
ABCA2-211	ENST00000464520	PIGB	Q92521	554 aa		33.25	■■■□□ 2.91
ABCA2-211	ENST00000464520	AKT1S1	Q96B36	256 aa		33.25	■■■□□ 2.91
ABCA2-211	ENST00000464520	CNGB1	Q14028	1251 aa	Predicted RBP	33.23	■■■□□ 2.91
ABCA2-211	ENST00000464520	DCAF5	Q96JK2	942 aa		33.23	■■■□□ 2.91
ABCA2-211	ENST00000464520	TMOD3	Q9NYL9	352 aa		33.23	■■■□□ 2.91
ABCA2-211	ENST00000464520	ERVV-2	B6SEH9	535 aa		33.22	■■■□□ 2.91
ABCA2-211	ENST00000464520	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.22	■■■□□ 2.91
ABCA2-211	ENST00000464520	PAPPA	Q13219	1627 aa		33.21	■■■□□ 2.91
ABCA2-211	ENST00000464520	ZNF827	Q17R98	1081 aa		33.21	■■■□□ 2.91
ABCA2-211	ENST00000464520	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.21	■■■□□ 2.91
ABCA2-211	ENST00000464520	PALLD	Q8WX93	1383 aa		33.21	■■■□□ 2.91
ABCA2-211	ENST00000464520	C1orf141	Q5JVX7	400 aa		33.2	■■■□□ 2.91
ABCA2-211	ENST00000464520	KCNQ4	P56696	695 aa		33.18	■■■□□ 2.9
ABCA2-211	ENST00000464520	LY75	O60449	1722 aa		33.18	■■■□□ 2.9
ABCA2-211	ENST00000464520	MTFR1L	Q9H019	292 aa		33.17	■■■□□ 2.9
ABCA2-211	ENST00000464520	TFCP2L1	Q9NZI6	479 aa		33.17	■■■□□ 2.9
ABCA2-211	ENST00000464520	ZBTB7A	O95365	584 aa		33.16	■■■□□ 2.9
ABCA2-211	ENST00000464520	SLC16A10	Q8TF71	515 aa		33.16	■■■□□ 2.9
ABCA2-211	ENST00000464520	CFAP53	Q96M91	514 aa		33.16	■■■□□ 2.9
ABCA2-211	ENST00000464520	CASZ1	Q86V15	1759 aa		33.15	■■■□□ 2.9
ABCA2-211	ENST00000464520	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.15	■■■□□ 2.9
ABCA2-211	ENST00000464520	TOGARAM1	Q9Y4F4	1720 aa		33.14	■■■□□ 2.89
ABCA2-211	ENST00000464520	HMOX1	P09601	288 aa		33.13	■■■□□ 2.89
ABCA2-211	ENST00000464520	ITGB4	P16144	1822 aa		33.12	■■■□□ 2.89
ABCA2-211	ENST00000464520	AKAP4	Q5JQC9	854 aa		33.11	■■■□□ 2.89
ABCA2-211	ENST00000464520	PPP2R1A	P30153	589 aa		33.1	■■■□□ 2.89
ABCA2-211	ENST00000464520	CABP4	P57796	275 aa		33.1	■■■□□ 2.89
ABCA2-211	ENST00000464520	ASAP1	Q9ULH1	1129 aa		33.1	■■■□□ 2.89
ABCA2-211	ENST00000464520	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.1	■■■□□ 2.89
ABCA2-211	ENST00000464520	LOC102724428	A0A0B4J2F2	783 aa		33.09	■■■□□ 2.89
ABCA2-211	ENST00000464520	SIK1	P57059	783 aa		33.09	■■■□□ 2.89
ABCA2-211	ENST00000464520	ATG3	Q9NT62	314 aa		33.09	■■■□□ 2.89
ABCA2-211	ENST00000464520	PNPLA7	Q6ZV29	1317 aa		33.08	■■■□□ 2.89
ABCA2-211	ENST00000464520	COL3A1	P02461	1466 aa	Predicted RBP	33.08	■■■□□ 2.89
ABCA2-211	ENST00000464520	U2SURP	O15042	1029 aa	Known RBP	33.08	■■■□□ 2.89
ABCA2-211	ENST00000464520	PTGER2	P43116	358 aa		33.08	■■■□□ 2.89
ABCA2-211	ENST00000464520	NUDC	Q9Y266	331 aa		33.07	■■■□□ 2.88
ABCA2-211	ENST00000464520	FLAD1	Q8NFF5	587 aa		33.06	■■■□□ 2.88
ABCA2-211	ENST00000464520	KDM6A	O15550	1401 aa	Predicted RBP	33.05	■■■□□ 2.88
ABCA2-211	ENST00000464520	SGIP1	Q9BQI5	828 aa		33.03	■■■□□ 2.88
ABCA2-211	ENST00000464520	MTHFSD	Q2M296	383 aa	Known RBP	33.02	■■■□□ 2.88
ABCA2-211	ENST00000464520	ZEB1	P37275	1124 aa	Predicted RBP	33.01	■■■□□ 2.87
ABCA2-211	ENST00000464520	ATP6V1A	P38606	617 aa		33.01	■■■□□ 2.87
ABCA2-211	ENST00000464520	NFATC2IP	Q8NCF5	419 aa		33.01	■■■□□ 2.87
ABCA2-211	ENST00000464520	QSER1	Q2KHR3	1735 aa		33.01	■■■□□ 2.87
ABCA2-211	ENST00000464520	COL23A1	Q86Y22	540 aa	Predicted RBP	32.99	■■■□□ 2.87
ABCA2-211	ENST00000464520	AK7	Q96M32	723 aa		32.99	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms