RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 ATP2B3Q16720 1220 aa4.65□□□□□ -1.67
CCNL1-204ENST00000464316 TPD52L1Q16890 204 aaPredicted RBP4.65□□□□□ -1.67
CCNL1-204ENST00000464316 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.65□□□□□ -1.67
CCNL1-204ENST00000464316 ATAD2Q6PL18 1390 aa4.65□□□□□ -1.67
CCNL1-204ENST00000464316 CD2BP2O95400 341 aaKnown RBP4.64□□□□□ -1.67
CCNL1-204ENST00000464316 ANAPC15P60006 121 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 BMS1Q14692 1282 aaKnown RBP4.64□□□□□ -1.67
CCNL1-204ENST00000464316 TTC22Q5TAA0 569 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 CTR9Q6PD62 1173 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 ZNF397Q8NF99 534 aaPredicted RBP4.64□□□□□ -1.67
CCNL1-204ENST00000464316 KIAA1524Q8TCG1 905 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 ZNF830Q96NB3 372 aaPredicted RBP4.64□□□□□ -1.67
CCNL1-204ENST00000464316 EFCAB6Q5THR3 1501 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 VGFO15240 615 aaPredicted RBP4.64□□□□□ -1.67
CCNL1-204ENST00000464316 BRD1O95696 1058 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 TNNT1P13805 278 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 GNAI1P63096 354 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 TPM4P67936 248 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 NOM1Q5C9Z4 860 aaKnown RBP4.64□□□□□ -1.67
CCNL1-204ENST00000464316 ANKRD7Q92527 254 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 TMX3Q96JJ7 454 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 TRPM1Q7Z4N2 1603 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 NSD2O96028 1365 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 ANKRD36BQ8N2N9 1353 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 CAVIN2O95810 425 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 IRX3P78415 501 aaPredicted RBP4.64□□□□□ -1.67
CCNL1-204ENST00000464316 SLC20A2Q08357 652 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 ZNF710Q8N1W2 664 aa4.64□□□□□ -1.67
CCNL1-204ENST00000464316 BRPF1P55201 1214 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 MPNDQ8N594 471 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 ZGPATQ8N5A5 531 aaKnown RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 TMEM51Q9NW97 253 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 MYO3AQ8NEV4 1616 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 GOLGA6L19H0YKK7 550 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 ZBTB7BO15156 539 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 CTIFO43310 598 aaKnown RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 HCLS1P14317 486 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 TSC1Q92574 1164 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 ZNF592Q92610 1267 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 CARD14Q9BXL6 1004 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 TRIM5Q9C035 493 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 DDX41Q9UJV9 622 aaKnown RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 CCDC171Q6TFL3 1326 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 DIAPH1O60610 1272 aaKnown RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 TUBB4AP04350 444 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 USP48Q86UV5 1035 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 SPC24Q8NBT2 197 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 PUS7Q96PZ0 661 aaKnown RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 NOL10Q9BSC4 688 aaKnown RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 DCTPP1Q9H773 170 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 SMC3Q9UQE7 1217 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 MORC2Q9Y6X9 1032 aaPredicted RBP4.63□□□□□ -1.67
CCNL1-204ENST00000464316 NSD3Q9BZ95 1437 aa4.63□□□□□ -1.67
CCNL1-204ENST00000464316 IGSF3O75054 1194 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 FBLN2P98095 1184 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 TERF2Q15554 542 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 PTPN14Q15678 1187 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 PLEKHM2Q8IWE5 1019 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 KIF18AQ8NI77 898 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 DIP2CQ9Y2E4 1556 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 EVC2Q86UK5 1308 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 EPB41L2O43491 1005 aaKnown RBP4.62□□□□□ -1.67
CCNL1-204ENST00000464316 TPM1P09493 284 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 ZRSR1Q15695 479 aaKnown RBP4.62□□□□□ -1.67
CCNL1-204ENST00000464316 FOXD4L6Q3SYB3 417 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-204ENST00000464316 FOXD4L3Q6VB84 417 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-204ENST00000464316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.62□□□□□ -1.67
CCNL1-204ENST00000464316 AEBP1Q8IUX7 1158 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 TXLNBQ8N3L3 684 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 FAM200AQ8TCP9 573 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 JPH4Q96JJ6 628 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 ANO2Q9NQ90 1003 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 TERF2IPQ9NYB0 399 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 MARF1Q9Y4F3 1742 aaKnown RBP4.62□□□□□ -1.67
CCNL1-204ENST00000464316 ATP10AO60312 1499 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 ADGRL1O94910 1474 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 ZFYVE16Q7Z3T8 1539 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 FCHSD2O94868 740 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 MAP3K11Q16584 847 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 EFCAB2Q5VUJ9 269 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 AK7Q96M32 723 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 CTNNA3Q9UI47 895 aa4.62□□□□□ -1.67
CCNL1-204ENST00000464316 ERICH4A6NGS2 130 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 CCP110O43303 1012 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 CHGAP10645 457 aaKnown RBP4.61□□□□□ -1.67
CCNL1-204ENST00000464316 SDSP20132 328 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 PDCP20941 246 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 CUL4AQ13619 759 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 PKP1Q13835 747 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 TPRNQ4KMQ1 711 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 CFAP70Q5T0N1 1121 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 CEP135Q66GS9 1140 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 ERO1AQ96HE7 468 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 C16orf45Q96MC5 204 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-204ENST00000464316 SLC12A5Q9H2X9 1139 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 EFCC1Q9HA90 598 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 KIF24Q5T7B8 1368 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 FAM177BA6PVY3 158 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 TRIM6-TRIM34B2RNG4 842 aa4.61□□□□□ -1.67
CCNL1-204ENST00000464316 NOL8Q76FK4 1167 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms