RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
CTDSP1-206ENST00000464255 WASHC2AQ641Q2 1341 aa18.09■□□□□ 0.49
CTDSP1-206ENST00000464255 PRIM1P49642 420 aaKnown RBP18.08■□□□□ 0.48
CTDSP1-206ENST00000464255 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.48
CTDSP1-206ENST00000464255 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
CTDSP1-206ENST00000464255 BTAF1O14981 1849 aa18.07■□□□□ 0.48
CTDSP1-206ENST00000464255 NSD2O96028 1365 aa18.07■□□□□ 0.48
CTDSP1-206ENST00000464255 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
CTDSP1-206ENST00000464255 ANKRD26Q9UPS8 1709 aa18.06■□□□□ 0.48
CTDSP1-206ENST00000464255 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-206ENST00000464255 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
CTDSP1-206ENST00000464255 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
CTDSP1-206ENST00000464255 RAPGEF4Q8WZA2 1011 aa18.05■□□□□ 0.48
CTDSP1-206ENST00000464255 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
CTDSP1-206ENST00000464255 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
CTDSP1-206ENST00000464255 CYP27B1O15528 508 aa18.04■□□□□ 0.48
CTDSP1-206ENST00000464255 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
CTDSP1-206ENST00000464255 EYA1Q99502 592 aa18.04■□□□□ 0.48
CTDSP1-206ENST00000464255 PAPPAQ13219 1627 aa18.03■□□□□ 0.48
CTDSP1-206ENST00000464255 TATP17735 454 aaPredicted RBP18.03■□□□□ 0.48
CTDSP1-206ENST00000464255 SPON1Q9HCB6 807 aa18.03■□□□□ 0.48
CTDSP1-206ENST00000464255 STK32BQ9NY57 414 aa18.03■□□□□ 0.48
CTDSP1-206ENST00000464255 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
CTDSP1-206ENST00000464255 ZNF827Q17R98 1081 aa18.02■□□□□ 0.48
CTDSP1-206ENST00000464255 EIF4A2Q14240 407 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-206ENST00000464255 SYTL4Q96C24 671 aaPredicted RBP18.01■□□□□ 0.47
CTDSP1-206ENST00000464255 ZBTB7AO95365 584 aa18■□□□□ 0.47
CTDSP1-206ENST00000464255 PTGER2P43116 358 aa18■□□□□ 0.47
CTDSP1-206ENST00000464255 KCNQ4P56696 695 aa18■□□□□ 0.47
CTDSP1-206ENST00000464255 AKT1S1Q96B36 256 aa18■□□□□ 0.47
CTDSP1-206ENST00000464255 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
CTDSP1-206ENST00000464255 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-206ENST00000464255 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
CTDSP1-206ENST00000464255 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
CTDSP1-206ENST00000464255 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
CTDSP1-206ENST00000464255 NKX1-1Q15270 411 aaPredicted RBP17.98■□□□□ 0.47
CTDSP1-206ENST00000464255 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
CTDSP1-206ENST00000464255 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
CTDSP1-206ENST00000464255 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
CTDSP1-206ENST00000464255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.96■□□□□ 0.47
CTDSP1-206ENST00000464255 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
CTDSP1-206ENST00000464255 MORC1Q86VD1 984 aa17.95■□□□□ 0.46
CTDSP1-206ENST00000464255 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
CTDSP1-206ENST00000464255 IGSF1Q8N6C5 1336 aa17.95■□□□□ 0.46
CTDSP1-206ENST00000464255 LY75O60449 1722 aa17.95■□□□□ 0.46
CTDSP1-206ENST00000464255 MTFR1LQ9H019 292 aa17.93■□□□□ 0.46
CTDSP1-206ENST00000464255 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
CTDSP1-206ENST00000464255 UTRNP46939 3433 aa17.93■□□□□ 0.46
CTDSP1-206ENST00000464255 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
CTDSP1-206ENST00000464255 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
CTDSP1-206ENST00000464255 PIGBQ92521 554 aa17.92■□□□□ 0.46
CTDSP1-206ENST00000464255 CCNL1Q9UK58 526 aaPredicted RBP17.92■□□□□ 0.46
CTDSP1-206ENST00000464255 PNPLA7Q6ZV29 1317 aa17.92■□□□□ 0.46
CTDSP1-206ENST00000464255 PHKG2P15735 406 aa17.91■□□□□ 0.46
CTDSP1-206ENST00000464255 PPP1R1BQ9UD71 204 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-206ENST00000464255 IL13P35225 146 aa17.89■□□□□ 0.45
CTDSP1-206ENST00000464255 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
CTDSP1-206ENST00000464255 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
CTDSP1-206ENST00000464255 TFCP2L1Q9NZI6 479 aa17.88■□□□□ 0.45
CTDSP1-206ENST00000464255 ITGB4P16144 1822 aa17.88■□□□□ 0.45
CTDSP1-206ENST00000464255 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
CTDSP1-206ENST00000464255 PLEKHG2Q9H7P9 1386 aa17.88■□□□□ 0.45
CTDSP1-206ENST00000464255 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
CTDSP1-206ENST00000464255 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
CTDSP1-206ENST00000464255 MTHFSP49914 203 aa17.85■□□□□ 0.45
CTDSP1-206ENST00000464255 COL23A1Q86Y22 540 aaPredicted RBP17.85■□□□□ 0.45
CTDSP1-206ENST00000464255 SLC16A10Q8TF71 515 aa17.85■□□□□ 0.45
CTDSP1-206ENST00000464255 SYT17Q9BSW7 474 aa17.85■□□□□ 0.45
CTDSP1-206ENST00000464255 FHDC1Q9C0D6 1143 aaPredicted RBP17.85■□□□□ 0.45
CTDSP1-206ENST00000464255 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
CTDSP1-206ENST00000464255 KDRP35968 1356 aa17.84■□□□□ 0.45
CTDSP1-206ENST00000464255 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-206ENST00000464255 AMIGO3Q86WK7 504 aa17.84■□□□□ 0.45
CTDSP1-206ENST00000464255 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-206ENST00000464255 ARXQ96QS3 562 aa17.84■□□□□ 0.45
CTDSP1-206ENST00000464255 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.44
CTDSP1-206ENST00000464255 ATG3Q9NT62 314 aa17.83■□□□□ 0.44
CTDSP1-206ENST00000464255 COL24A1Q17RW2 1714 aa17.83■□□□□ 0.44
CTDSP1-206ENST00000464255 GOLGB1Q14789 3259 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-206ENST00000464255 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
CTDSP1-206ENST00000464255 PLEKHO1Q53GL0 409 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-206ENST00000464255 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
CTDSP1-206ENST00000464255 ERVV-2B6SEH9 535 aa17.81■□□□□ 0.44
CTDSP1-206ENST00000464255 AMOTQ4VCS5 1084 aa17.81■□□□□ 0.44
CTDSP1-206ENST00000464255 TAF1LQ8IZX4 1826 aa17.81■□□□□ 0.44
CTDSP1-206ENST00000464255 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-206ENST00000464255 C5P01031 1676 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 LOC102724428A0A0B4J2F2 783 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 SIK1P57059 783 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 ITPK1Q13572 414 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 SMIM5Q71RC9 77 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 LINC00116Q8NCU8 138 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 SLC4A9Q96Q91 983 aa17.8■□□□□ 0.44
CTDSP1-206ENST00000464255 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
CTDSP1-206ENST00000464255 HSP90AB1P08238 724 aaKnown RBP17.77■□□□□ 0.44
CTDSP1-206ENST00000464255 C4BP0C0L5 1744 aa17.77■□□□□ 0.44
CTDSP1-206ENST00000464255 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-206ENST00000464255 HMOX1P09601 288 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms