RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 NSD2O96028 1365 aa28.53■■■□□ 2.16
CD58-204ENST00000464088 BTAF1O14981 1849 aa28.53■■■□□ 2.16
CD58-204ENST00000464088 LTN1O94822 1766 aa28.53■■■□□ 2.16
CD58-204ENST00000464088 AMER1Q5JTC6 1135 aaPredicted RBP28.53■■■□□ 2.16
CD58-204ENST00000464088 COL24A1Q17RW2 1714 aa28.5■■■□□ 2.15
CD58-204ENST00000464088 QSER1Q2KHR3 1735 aa28.49■■■□□ 2.15
CD58-204ENST00000464088 ACSBG1Q96GR2 724 aa28.49■■■□□ 2.15
CD58-204ENST00000464088 FBLN1P23142 703 aa28.48■■■□□ 2.15
CD58-204ENST00000464088 ERBB3P21860 1342 aa28.47■■■□□ 2.15
CD58-204ENST00000464088 NPC1L1Q9UHC9 1359 aa28.47■■■□□ 2.15
CD58-204ENST00000464088 ZNF827Q17R98 1081 aa28.46■■■□□ 2.15
CD58-204ENST00000464088 MAP3K19Q56UN5 1328 aa28.44■■■□□ 2.14
CD58-204ENST00000464088 ZNF316A6NFI3 1004 aaPredicted RBP28.44■■■□□ 2.14
CD58-204ENST00000464088 IL2RBP14784 551 aa28.44■■■□□ 2.14
CD58-204ENST00000464088 SLC16A10Q8TF71 515 aa28.44■■■□□ 2.14
CD58-204ENST00000464088 LRRC4BQ9NT99 713 aa28.44■■■□□ 2.14
CD58-204ENST00000464088 KAT6BQ8WYB5 2073 aa28.44■■■□□ 2.14
CD58-204ENST00000464088 MAP2P11137 1827 aaKnown RBP28.42■■■□□ 2.14
CD58-204ENST00000464088 GPR162Q16538 588 aa28.42■■■□□ 2.14
CD58-204ENST00000464088 AKT1S1Q96B36 256 aa28.42■■■□□ 2.14
CD58-204ENST00000464088 NLRP2Q9NX02 1062 aa28.41■■■□□ 2.14
CD58-204ENST00000464088 RRS1Q15050 365 aaKnown RBP28.4■■■□□ 2.14
CD58-204ENST00000464088 GOLGB1Q14789 3259 aaKnown RBP28.39■■■□□ 2.14
CD58-204ENST00000464088 DDX10Q13206 875 aaKnown RBP28.39■■■□□ 2.14
CD58-204ENST00000464088 SLC27A3Q5K4L6 730 aa28.38■■■□□ 2.13
CD58-204ENST00000464088 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
CD58-204ENST00000464088 IP6K1Q92551 441 aa28.38■■■□□ 2.13
CD58-204ENST00000464088 RTL1A6NKG5 1358 aa28.37■■■□□ 2.13
CD58-204ENST00000464088 CC2D1BQ5T0F9 858 aaKnown RBP28.37■■■□□ 2.13
CD58-204ENST00000464088 TUBGCP6Q96RT7 1819 aa28.36■■■□□ 2.13
CD58-204ENST00000464088 KIF24Q5T7B8 1368 aa28.36■■■□□ 2.13
CD58-204ENST00000464088 GIGYF1O75420 1035 aaPredicted RBP28.35■■■□□ 2.13
CD58-204ENST00000464088 HOXC9P31274 260 aa28.35■■■□□ 2.13
CD58-204ENST00000464088 POLD1P28340 1107 aa28.34■■■□□ 2.13
CD58-204ENST00000464088 TNNT2P45379 298 aaPredicted RBP28.34■■■□□ 2.13
CD58-204ENST00000464088 ANKRD24Q8TF21 1146 aa28.34■■■□□ 2.13
CD58-204ENST00000464088 POLKQ9UBT6 870 aa28.34■■■□□ 2.13
CD58-204ENST00000464088 EMILIN1Q9Y6C2 1016 aa28.34■■■□□ 2.13
CD58-204ENST00000464088 PNPLA7Q6ZV29 1317 aa28.34■■■□□ 2.13
CD58-204ENST00000464088 SHANK3Q9BYB0 1731 aa28.34■■■□□ 2.13
CD58-204ENST00000464088 AMPHP49418 695 aa28.33■■■□□ 2.13
CD58-204ENST00000464088 SMG6Q86US8 1419 aaKnown RBP28.33■■■□□ 2.13
CD58-204ENST00000464088 IFFO2Q5TF58 517 aa28.32■■■□□ 2.12
CD58-204ENST00000464088 FLT4P35916 1363 aa28.31■■■□□ 2.12
CD58-204ENST00000464088 LY75O60449 1722 aa28.31■■■□□ 2.12
CD58-204ENST00000464088 FAM208AQ9UK61 1670 aaKnown RBP28.3■■■□□ 2.12
CD58-204ENST00000464088 CEP350Q5VT06 3117 aa28.29■■■□□ 2.12
CD58-204ENST00000464088 INSRP06213 1382 aa28.28■■■□□ 2.12
CD58-204ENST00000464088 KLHL34Q8N239 644 aa28.28■■■□□ 2.12
CD58-204ENST00000464088 NLGN2Q8NFZ4 835 aa28.27■■■□□ 2.12
CD58-204ENST00000464088 CNGB1Q14028 1251 aaPredicted RBP28.26■■■□□ 2.11
CD58-204ENST00000464088 HSP90AB2PQ58FF8 381 aa28.26■■■□□ 2.11
CD58-204ENST00000464088 TFCP2L1Q9NZI6 479 aa28.26■■■□□ 2.11
CD58-204ENST00000464088 PELP1Q8IZL8 1130 aaKnown RBP28.24■■■□□ 2.11
CD58-204ENST00000464088 DDX54Q8TDD1 881 aaKnown RBP28.24■■■□□ 2.11
CD58-204ENST00000464088 DOT1LQ8TEK3 1739 aa28.23■■■□□ 2.11
CD58-204ENST00000464088 RGPD2P0DJD1 1756 aa28.23■■■□□ 2.11
CD58-204ENST00000464088 PPM1GO15355 546 aaPredicted RBP28.22■■■□□ 2.11
CD58-204ENST00000464088 GRIN3BO60391 1043 aa28.22■■■□□ 2.11
CD58-204ENST00000464088 LTV1Q96GA3 475 aaPredicted RBP28.21■■■□□ 2.11
CD58-204ENST00000464088 YBX3P16989 372 aaKnown RBP eCLIP28.2■■■□□ 2.1
CD58-204ENST00000464088 KCNQ4P56696 695 aa28.2■■■□□ 2.1
CD58-204ENST00000464088 PRIM1P49642 420 aaKnown RBP28.19■■■□□ 2.1
CD58-204ENST00000464088 MTHFSP49914 203 aa28.18■■■□□ 2.1
CD58-204ENST00000464088 SYTL4Q96C24 671 aaPredicted RBP28.16■■■□□ 2.1
CD58-204ENST00000464088 PPP2R1AP30153 589 aa28.14■■■□□ 2.1
CD58-204ENST00000464088 EIF4A2Q14240 407 aaKnown RBP28.13■■■□□ 2.09
CD58-204ENST00000464088 NBPF6Q5VWK0 638 aa28.13■■■□□ 2.09
CD58-204ENST00000464088 COL23A1Q86Y22 540 aaPredicted RBP28.13■■■□□ 2.09
CD58-204ENST00000464088 NBPF4Q96M43 638 aa28.13■■■□□ 2.09
CD58-204ENST00000464088 CCNL1Q9UK58 526 aaPredicted RBP28.13■■■□□ 2.09
CD58-204ENST00000464088 NCAPD2Q15021 1401 aa28.12■■■□□ 2.09
CD58-204ENST00000464088 COL3A1P02461 1466 aaPredicted RBP28.11■■■□□ 2.09
CD58-204ENST00000464088 ZCRB1Q8TBF4 217 aaKnown RBP28.11■■■□□ 2.09
CD58-204ENST00000464088 ATP10DQ9P241 1426 aa28.1■■■□□ 2.09
CD58-204ENST00000464088 RALBP1Q15311 655 aa28.1■■■□□ 2.09
CD58-204ENST00000464088 MEGF6O75095 1541 aa28.09■■■□□ 2.09
CD58-204ENST00000464088 C5P01031 1676 aa28.08■■■□□ 2.09
CD58-204ENST00000464088 EYA1Q99502 592 aa28.08■■■□□ 2.09
CD58-204ENST00000464088 IL13P35225 146 aa28.07■■■□□ 2.08
CD58-204ENST00000464088 CD2APQ9Y5K6 639 aa28.07■■■□□ 2.08
CD58-204ENST00000464088 MSH5O43196 834 aa28.06■■■□□ 2.08
CD58-204ENST00000464088 USHBP1Q8N6Y0 703 aa28.06■■■□□ 2.08
CD58-204ENST00000464088 TAF1LQ8IZX4 1826 aa28.06■■■□□ 2.08
CD58-204ENST00000464088 ADCY9O60503 1353 aa28.05■■■□□ 2.08
CD58-204ENST00000464088 PRKRIP1Q9H875 184 aaPredicted RBP28.05■■■□□ 2.08
CD58-204ENST00000464088 IGSF1Q8N6C5 1336 aa28.04■■■□□ 2.08
CD58-204ENST00000464088 HMGB2P26583 209 aaKnown RBP28.03■■■□□ 2.08
CD58-204ENST00000464088 MSL1Q68DK7 614 aa28.02■■■□□ 2.08
CD58-204ENST00000464088 GPBP1L1Q9HC44 474 aaPredicted RBP28.02■■■□□ 2.08
CD58-204ENST00000464088 FLAD1Q8NFF5 587 aa28.01■■■□□ 2.07
CD58-204ENST00000464088 MYBBP1AQ9BQG0 1328 aaKnown RBP28■■■□□ 2.07
CD58-204ENST00000464088 DIAPH1O60610 1272 aaKnown RBP28■■■□□ 2.07
CD58-204ENST00000464088 HSPA6P17066 643 aa27.99■■■□□ 2.07
CD58-204ENST00000464088 CFAP53Q96M91 514 aa27.98■■■□□ 2.07
CD58-204ENST00000464088 KDRP35968 1356 aa27.96■■■□□ 2.07
CD58-204ENST00000464088 RAPGEF4Q8WZA2 1011 aa27.94■■■□□ 2.06
CD58-204ENST00000464088 C4BP0C0L5 1744 aa27.94■■■□□ 2.06
CD58-204ENST00000464088 PKD1L3Q7Z443 1732 aa27.94■■■□□ 2.06
CD58-204ENST00000464088 TOGARAM1Q9Y4F4 1720 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms