RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.52
COMMD3-205ENST00000463688 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
COMMD3-205ENST00000463688 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
COMMD3-205ENST00000463688 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
COMMD3-205ENST00000463688 SPON1Q9HCB6 807 aa18.25■□□□□ 0.51
COMMD3-205ENST00000463688 WNK3Q9BYP7 1800 aa18.25■□□□□ 0.51
COMMD3-205ENST00000463688 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
COMMD3-205ENST00000463688 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
COMMD3-205ENST00000463688 MYOM1P52179 1685 aa18.25■□□□□ 0.51
COMMD3-205ENST00000463688 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
COMMD3-205ENST00000463688 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
COMMD3-205ENST00000463688 KCNQ2O43526 872 aa18.23■□□□□ 0.51
COMMD3-205ENST00000463688 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
COMMD3-205ENST00000463688 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
COMMD3-205ENST00000463688 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
COMMD3-205ENST00000463688 EYA1Q99502 592 aa18.23■□□□□ 0.51
COMMD3-205ENST00000463688 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
COMMD3-205ENST00000463688 PLEKHO1Q53GL0 409 aaPredicted RBP18.22■□□□□ 0.51
COMMD3-205ENST00000463688 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
COMMD3-205ENST00000463688 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
COMMD3-205ENST00000463688 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
COMMD3-205ENST00000463688 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
COMMD3-205ENST00000463688 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
COMMD3-205ENST00000463688 IFNL2Q8IZJ0 200 aa18.21■□□□□ 0.51
COMMD3-205ENST00000463688 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.51
COMMD3-205ENST00000463688 MEGF6O75095 1541 aa18.2■□□□□ 0.5
COMMD3-205ENST00000463688 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
COMMD3-205ENST00000463688 PROM2Q8N271 834 aa18.2■□□□□ 0.5
COMMD3-205ENST00000463688 NCAPD2Q15021 1401 aa18.19■□□□□ 0.5
COMMD3-205ENST00000463688 IGSF1Q8N6C5 1336 aa18.18■□□□□ 0.5
COMMD3-205ENST00000463688 PTF1AQ7RTS3 328 aa18.17■□□□□ 0.5
COMMD3-205ENST00000463688 SLC16A10Q8TF71 515 aa18.17■□□□□ 0.5
COMMD3-205ENST00000463688 NHSQ6T4R5 1651 aa18.17■□□□□ 0.5
COMMD3-205ENST00000463688 LRP5O75197 1615 aa18.17■□□□□ 0.5
COMMD3-205ENST00000463688 FLAD1Q8NFF5 587 aa18.16■□□□□ 0.5
COMMD3-205ENST00000463688 SBF2Q86WG5 1849 aa18.16■□□□□ 0.5
COMMD3-205ENST00000463688 RREB1Q92766 1687 aa18.16■□□□□ 0.5
COMMD3-205ENST00000463688 PER1O15534 1290 aaPredicted RBP18.15■□□□□ 0.5
COMMD3-205ENST00000463688 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
COMMD3-205ENST00000463688 CYP27B1O15528 508 aa18.15■□□□□ 0.5
COMMD3-205ENST00000463688 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
COMMD3-205ENST00000463688 MTFR1LQ9H019 292 aa18.15■□□□□ 0.5
COMMD3-205ENST00000463688 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
COMMD3-205ENST00000463688 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
COMMD3-205ENST00000463688 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
COMMD3-205ENST00000463688 TMOD3Q9NYL9 352 aa18.14■□□□□ 0.49
COMMD3-205ENST00000463688 ERVV-2B6SEH9 535 aa18.13■□□□□ 0.49
COMMD3-205ENST00000463688 TFCP2L1Q9NZI6 479 aa18.13■□□□□ 0.49
COMMD3-205ENST00000463688 KAT6BQ8WYB5 2073 aa18.12■□□□□ 0.49
COMMD3-205ENST00000463688 ANKRD26Q9UPS8 1709 aa18.12■□□□□ 0.49
COMMD3-205ENST00000463688 PHKG2P15735 406 aa18.12■□□□□ 0.49
COMMD3-205ENST00000463688 MTHFSP49914 203 aa18.12■□□□□ 0.49
COMMD3-205ENST00000463688 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
COMMD3-205ENST00000463688 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
COMMD3-205ENST00000463688 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
COMMD3-205ENST00000463688 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
COMMD3-205ENST00000463688 NUP188Q5SRE5 1749 aa18.11■□□□□ 0.49
COMMD3-205ENST00000463688 POLD1P28340 1107 aa18.1■□□□□ 0.49
COMMD3-205ENST00000463688 SULT6B1Q6IMI4 303 aa18.1■□□□□ 0.49
COMMD3-205ENST00000463688 MAP2P11137 1827 aaKnown RBP18.1■□□□□ 0.49
COMMD3-205ENST00000463688 IL13P35225 146 aa18.09■□□□□ 0.49
COMMD3-205ENST00000463688 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
COMMD3-205ENST00000463688 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.49
COMMD3-205ENST00000463688 AKT1S1Q96B36 256 aa18.08■□□□□ 0.49
COMMD3-205ENST00000463688 PALLDQ8WX93 1383 aa18.08■□□□□ 0.48
COMMD3-205ENST00000463688 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
COMMD3-205ENST00000463688 KDRP35968 1356 aa18.07■□□□□ 0.48
COMMD3-205ENST00000463688 PIGBQ92521 554 aa18.06■□□□□ 0.48
COMMD3-205ENST00000463688 ZBTB7AO95365 584 aa18.06■□□□□ 0.48
COMMD3-205ENST00000463688 CABP4P57796 275 aa18.06■□□□□ 0.48
COMMD3-205ENST00000463688 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
COMMD3-205ENST00000463688 AK7Q96M32 723 aa18.05■□□□□ 0.48
COMMD3-205ENST00000463688 BTAF1O14981 1849 aa18.05■□□□□ 0.48
COMMD3-205ENST00000463688 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
COMMD3-205ENST00000463688 SIK1P57059 783 aa18.03■□□□□ 0.48
COMMD3-205ENST00000463688 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
COMMD3-205ENST00000463688 RGPD2P0DJD1 1756 aa18.01■□□□□ 0.47
COMMD3-205ENST00000463688 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
COMMD3-205ENST00000463688 NEFMP07197 916 aa18.01■□□□□ 0.47
COMMD3-205ENST00000463688 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
COMMD3-205ENST00000463688 ZNF827Q17R98 1081 aa18.01■□□□□ 0.47
COMMD3-205ENST00000463688 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
COMMD3-205ENST00000463688 ARXQ96QS3 562 aa18.01■□□□□ 0.47
COMMD3-205ENST00000463688 U2SURPO15042 1029 aaKnown RBP17.99■□□□□ 0.47
COMMD3-205ENST00000463688 SSFA2P28290 1259 aa17.99■□□□□ 0.47
COMMD3-205ENST00000463688 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
COMMD3-205ENST00000463688 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
COMMD3-205ENST00000463688 DOT1LQ8TEK3 1739 aa17.99■□□□□ 0.47
COMMD3-205ENST00000463688 PTGER2P43116 358 aa17.98■□□□□ 0.47
COMMD3-205ENST00000463688 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
COMMD3-205ENST00000463688 PNPLA7Q6ZV29 1317 aa17.98■□□□□ 0.47
COMMD3-205ENST00000463688 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
COMMD3-205ENST00000463688 RC3H1Q5TC82 1133 aaKnown RBP17.97■□□□□ 0.47
COMMD3-205ENST00000463688 ASAP1Q9ULH1 1129 aa17.97■□□□□ 0.47
COMMD3-205ENST00000463688 MAP3K5Q99683 1374 aa17.96■□□□□ 0.47
COMMD3-205ENST00000463688 SHANK3Q9BYB0 1731 aa17.96■□□□□ 0.47
COMMD3-205ENST00000463688 HMOX1P09601 288 aa17.96■□□□□ 0.47
COMMD3-205ENST00000463688 PAPPAQ13219 1627 aa17.95■□□□□ 0.46
COMMD3-205ENST00000463688 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
COMMD3-205ENST00000463688 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms