RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 TFCP2L1Q9NZI6 479 aa21.43■■□□□ 1.02
CMSS1-202ENST00000463526 PAPPAQ13219 1627 aa21.43■■□□□ 1.02
CMSS1-202ENST00000463526 MEGF6O75095 1541 aa21.41■■□□□ 1.02
CMSS1-202ENST00000463526 USP47Q96K76 1375 aa21.41■■□□□ 1.02
CMSS1-202ENST00000463526 PNPLA7Q6ZV29 1317 aa21.4■■□□□ 1.02
CMSS1-202ENST00000463526 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
CMSS1-202ENST00000463526 POLD1P28340 1107 aa21.39■■□□□ 1.01
CMSS1-202ENST00000463526 HSP90AB2PQ58FF8 381 aa21.39■■□□□ 1.01
CMSS1-202ENST00000463526 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.01
CMSS1-202ENST00000463526 CCNL1Q9UK58 526 aaPredicted RBP21.39■■□□□ 1.01
CMSS1-202ENST00000463526 RTL1A6NKG5 1358 aa21.38■■□□□ 1.01
CMSS1-202ENST00000463526 FAM208AQ9UK61 1670 aaKnown RBP21.38■■□□□ 1.01
CMSS1-202ENST00000463526 MSH5O43196 834 aa21.38■■□□□ 1.01
CMSS1-202ENST00000463526 GPR162Q16538 588 aa21.38■■□□□ 1.01
CMSS1-202ENST00000463526 ZNF784Q8NCA9 323 aaPredicted RBP21.38■■□□□ 1.01
CMSS1-202ENST00000463526 RGPD2P0DJD1 1756 aa21.38■■□□□ 1.01
CMSS1-202ENST00000463526 NSD2O96028 1365 aa21.37■■□□□ 1.01
CMSS1-202ENST00000463526 TATP17735 454 aaPredicted RBP21.37■■□□□ 1.01
CMSS1-202ENST00000463526 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
CMSS1-202ENST00000463526 SMG6Q86US8 1419 aaKnown RBP21.36■■□□□ 1.01
CMSS1-202ENST00000463526 TRIM26Q12899 539 aaPredicted RBP21.35■■□□□ 1.01
CMSS1-202ENST00000463526 CDCA8Q53HL2 280 aa21.35■■□□□ 1.01
CMSS1-202ENST00000463526 DOT1LQ8TEK3 1739 aa21.34■■□□□ 1.01
CMSS1-202ENST00000463526 CGNL1Q0VF96 1302 aa21.33■■□□□ 1.01
CMSS1-202ENST00000463526 MAP3K5Q99683 1374 aa21.33■■□□□ 1
CMSS1-202ENST00000463526 PPM1GO15355 546 aaPredicted RBP21.32■■□□□ 1
CMSS1-202ENST00000463526 CARD14Q9BXL6 1004 aa21.32■■□□□ 1
CMSS1-202ENST00000463526 EMILIN1Q9Y6C2 1016 aa21.32■■□□□ 1
CMSS1-202ENST00000463526 MPRIPQ6WCQ1 1025 aa21.31■■□□□ 1
CMSS1-202ENST00000463526 COL23A1Q86Y22 540 aaPredicted RBP21.31■■□□□ 1
CMSS1-202ENST00000463526 NLGN2Q8NFZ4 835 aa21.31■■□□□ 1
CMSS1-202ENST00000463526 INSRP06213 1382 aa21.31■■□□□ 1
CMSS1-202ENST00000463526 FLT4P35916 1363 aa21.31■■□□□ 1
CMSS1-202ENST00000463526 MSL1Q68DK7 614 aa21.3■■□□□ 1
CMSS1-202ENST00000463526 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
CMSS1-202ENST00000463526 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
CMSS1-202ENST00000463526 SHANK3Q9BYB0 1731 aa21.29■■□□□ 1
CMSS1-202ENST00000463526 UTRNP46939 3433 aa21.28■■□□□ 1
CMSS1-202ENST00000463526 POLR3GLQ9BT43 218 aa21.28■■□□□ 1
CMSS1-202ENST00000463526 NSD3Q9BZ95 1437 aa21.28■■□□□ 1
CMSS1-202ENST00000463526 CYP27B1O15528 508 aa21.27■■□□□ 1
CMSS1-202ENST00000463526 LY75O60449 1722 aa21.26■□□□□ 0.99
CMSS1-202ENST00000463526 PALLDQ8WX93 1383 aa21.25■□□□□ 0.99
CMSS1-202ENST00000463526 TUBGCP6Q96RT7 1819 aa21.25■□□□□ 0.99
CMSS1-202ENST00000463526 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
CMSS1-202ENST00000463526 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
CMSS1-202ENST00000463526 KIF20BQ96Q89 1820 aa21.22■□□□□ 0.99
CMSS1-202ENST00000463526 SMIM5Q71RC9 77 aa21.21■□□□□ 0.99
CMSS1-202ENST00000463526 PIGBQ92521 554 aa21.21■□□□□ 0.99
CMSS1-202ENST00000463526 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
CMSS1-202ENST00000463526 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
CMSS1-202ENST00000463526 CHD4Q14839 1912 aa21.21■□□□□ 0.99
CMSS1-202ENST00000463526 YBX3P16989 372 aaKnown RBP eCLIP21.2■□□□□ 0.98
CMSS1-202ENST00000463526 TNNT2P45379 298 aaPredicted RBP21.2■□□□□ 0.98
CMSS1-202ENST00000463526 AK7Q96M32 723 aa21.2■□□□□ 0.98
CMSS1-202ENST00000463526 EYA1Q99502 592 aa21.2■□□□□ 0.98
CMSS1-202ENST00000463526 SPG7Q9UQ90 795 aa21.2■□□□□ 0.98
CMSS1-202ENST00000463526 PHF14O94880 888 aa21.19■□□□□ 0.98
CMSS1-202ENST00000463526 FLAD1Q8NFF5 587 aa21.19■□□□□ 0.98
CMSS1-202ENST00000463526 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
CMSS1-202ENST00000463526 SENP3-EIF4A1A0A087X0R7 540 aa21.17■□□□□ 0.98
CMSS1-202ENST00000463526 C1QTNF8P60827 252 aa21.17■□□□□ 0.98
CMSS1-202ENST00000463526 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
CMSS1-202ENST00000463526 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
CMSS1-202ENST00000463526 COL24A1Q17RW2 1714 aa21.16■□□□□ 0.98
CMSS1-202ENST00000463526 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
CMSS1-202ENST00000463526 HMGB2P26583 209 aaKnown RBP21.16■□□□□ 0.98
CMSS1-202ENST00000463526 NKX1-1Q15270 411 aaPredicted RBP21.16■□□□□ 0.98
CMSS1-202ENST00000463526 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
CMSS1-202ENST00000463526 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
CMSS1-202ENST00000463526 C5P01031 1676 aa21.14■□□□□ 0.97
CMSS1-202ENST00000463526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
CMSS1-202ENST00000463526 LOC102724428A0A0B4J2F2 783 aa21.13■□□□□ 0.97
CMSS1-202ENST00000463526 SIK1P57059 783 aa21.13■□□□□ 0.97
CMSS1-202ENST00000463526 LINC00116Q8NCU8 138 aa21.13■□□□□ 0.97
CMSS1-202ENST00000463526 WWC3Q9ULE0 1092 aa21.13■□□□□ 0.97
CMSS1-202ENST00000463526 ASAP1Q9ULH1 1129 aa21.13■□□□□ 0.97
CMSS1-202ENST00000463526 CD2APQ9Y5K6 639 aa21.13■□□□□ 0.97
CMSS1-202ENST00000463526 TOGARAM1Q9Y4F4 1720 aa21.12■□□□□ 0.97
CMSS1-202ENST00000463526 GIGYF1O75420 1035 aaPredicted RBP21.12■□□□□ 0.97
CMSS1-202ENST00000463526 PHKG2P15735 406 aa21.12■□□□□ 0.97
CMSS1-202ENST00000463526 EIF4A2Q14240 407 aaKnown RBP21.12■□□□□ 0.97
CMSS1-202ENST00000463526 IFNL2Q8IZJ0 200 aa21.12■□□□□ 0.97
CMSS1-202ENST00000463526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.97
CMSS1-202ENST00000463526 NCAPD2Q15021 1401 aa21.11■□□□□ 0.97
CMSS1-202ENST00000463526 ATP6V1AP38606 617 aa21.1■□□□□ 0.97
CMSS1-202ENST00000463526 GOLGB1Q14789 3259 aaKnown RBP21.1■□□□□ 0.97
CMSS1-202ENST00000463526 ITGB4P16144 1822 aa21.09■□□□□ 0.97
CMSS1-202ENST00000463526 ITPK1Q13572 414 aa21.09■□□□□ 0.97
CMSS1-202ENST00000463526 C4BP0C0L5 1744 aa21.09■□□□□ 0.97
CMSS1-202ENST00000463526 PKD1L3Q7Z443 1732 aa21.09■□□□□ 0.97
CMSS1-202ENST00000463526 GNPATO15228 680 aa21.08■□□□□ 0.97
CMSS1-202ENST00000463526 PANK3Q9H999 370 aa21.08■□□□□ 0.97
CMSS1-202ENST00000463526 ATG3Q9NT62 314 aa21.08■□□□□ 0.97
CMSS1-202ENST00000463526 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.96
CMSS1-202ENST00000463526 TAF1LQ8IZX4 1826 aa21.08■□□□□ 0.96
CMSS1-202ENST00000463526 HSPA5P11021 654 aaKnown RBP21.07■□□□□ 0.96
CMSS1-202ENST00000463526 SSFA2P28290 1259 aa21.07■□□□□ 0.96
CMSS1-202ENST00000463526 EIF4G2P78344 907 aaKnown RBP eCLIP21.06■□□□□ 0.961e-6■■■■■ 40.1
CMSS1-202ENST00000463526 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 276.5 ms