RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 FBLN1P23142 703 aa29.24■■■□□ 2.27
CPSF7-209ENST00000463244 SYTL4Q96C24 671 aaPredicted RBP29.24■■■□□ 2.27
CPSF7-209ENST00000463244 PNPLA7Q6ZV29 1317 aa29.23■■■□□ 2.27
CPSF7-209ENST00000463244 AMPHP49418 695 aa29.23■■■□□ 2.27
CPSF7-209ENST00000463244 PRIM1P49642 420 aaKnown RBP29.23■■■□□ 2.27
CPSF7-209ENST00000463244 NSD2O96028 1365 aa29.23■■■□□ 2.27
CPSF7-209ENST00000463244 MEGF6O75095 1541 aa29.22■■■□□ 2.27
CPSF7-209ENST00000463244 SLC24A1O60721 1099 aa29.21■■■□□ 2.27
CPSF7-209ENST00000463244 ZCRB1Q8TBF4 217 aaKnown RBP29.21■■■□□ 2.27
CPSF7-209ENST00000463244 KCNQ4P56696 695 aa29.2■■■□□ 2.26
CPSF7-209ENST00000463244 TFCP2L1Q9NZI6 479 aa29.2■■■□□ 2.26
CPSF7-209ENST00000463244 RTL1A6NKG5 1358 aa29.2■■■□□ 2.26
CPSF7-209ENST00000463244 POLD1P28340 1107 aa29.19■■■□□ 2.26
CPSF7-209ENST00000463244 RRS1Q15050 365 aaKnown RBP29.15■■■□□ 2.26
CPSF7-209ENST00000463244 GPR162Q16538 588 aa29.15■■■□□ 2.26
CPSF7-209ENST00000463244 NBPF6Q5VWK0 638 aa29.14■■■□□ 2.26
CPSF7-209ENST00000463244 KLHL34Q8N239 644 aa29.14■■■□□ 2.26
CPSF7-209ENST00000463244 NBPF4Q96M43 638 aa29.14■■■□□ 2.26
CPSF7-209ENST00000463244 CCNL1Q9UK58 526 aaPredicted RBP29.13■■■□□ 2.25
CPSF7-209ENST00000463244 CGNL1Q0VF96 1302 aa29.13■■■□□ 2.25
CPSF7-209ENST00000463244 FYB1O15117 783 aa29.12■■■□□ 2.25
CPSF7-209ENST00000463244 GGNBP2Q9H3C7 697 aa29.11■■■□□ 2.25
CPSF7-209ENST00000463244 USP47Q96K76 1375 aa29.11■■■□□ 2.25
CPSF7-209ENST00000463244 USHBP1Q8N6Y0 703 aa29.1■■■□□ 2.25
CPSF7-209ENST00000463244 SMG6Q86US8 1419 aaKnown RBP29.1■■■□□ 2.25
CPSF7-209ENST00000463244 RAPGEF4Q8WZA2 1011 aa29.08■■■□□ 2.25
CPSF7-209ENST00000463244 TMF1P82094 1093 aa29.07■■■□□ 2.24
CPSF7-209ENST00000463244 NLGN2Q8NFZ4 835 aa29.07■■■□□ 2.24
CPSF7-209ENST00000463244 KIF20BQ96Q89 1820 aa29.07■■■□□ 2.24
CPSF7-209ENST00000463244 C5P01031 1676 aa29.05■■■□□ 2.24
CPSF7-209ENST00000463244 C1QTNF8P60827 252 aa29.05■■■□□ 2.24
CPSF7-209ENST00000463244 COL23A1Q86Y22 540 aaPredicted RBP29.05■■■□□ 2.24
CPSF7-209ENST00000463244 INSRP06213 1382 aa29.04■■■□□ 2.24
CPSF7-209ENST00000463244 HSP90AB2PQ58FF8 381 aa29.04■■■□□ 2.24
CPSF7-209ENST00000463244 PELP1Q8IZL8 1130 aaKnown RBP29.04■■■□□ 2.24
CPSF7-209ENST00000463244 FLT4P35916 1363 aa29.03■■■□□ 2.24
CPSF7-209ENST00000463244 TATP17735 454 aaPredicted RBP29.03■■■□□ 2.24
CPSF7-209ENST00000463244 KIF24Q5T7B8 1368 aa29.02■■■□□ 2.24
CPSF7-209ENST00000463244 PCDH11XQ9BZA7 1347 aa29.02■■■□□ 2.24
CPSF7-209ENST00000463244 PCDH11YQ9BZA8 1340 aa29.02■■■□□ 2.24
CPSF7-209ENST00000463244 TAF1LQ8IZX4 1826 aa29.01■■■□□ 2.24
CPSF7-209ENST00000463244 MSH5O43196 834 aa29.01■■■□□ 2.23
CPSF7-209ENST00000463244 CEP350Q5VT06 3117 aa28.99■■■□□ 2.23
CPSF7-209ENST00000463244 SENP3-EIF4A1A0A087X0R7 540 aa28.99■■■□□ 2.23
CPSF7-209ENST00000463244 PALLDQ8WX93 1383 aa28.98■■■□□ 2.23
CPSF7-209ENST00000463244 TOGARAM1Q9Y4F4 1720 aa28.97■■■□□ 2.23
CPSF7-209ENST00000463244 ITGB4P16144 1822 aa28.97■■■□□ 2.23
CPSF7-209ENST00000463244 CYP27B1O15528 508 aa28.96■■■□□ 2.23
CPSF7-209ENST00000463244 YBX3P16989 372 aaKnown RBP eCLIP28.96■■■□□ 2.233e-7■■□□□ 12.8
CPSF7-209ENST00000463244 HMGB2P26583 209 aaKnown RBP28.96■■■□□ 2.23
CPSF7-209ENST00000463244 CDCA8Q53HL2 280 aa28.96■■■□□ 2.23
CPSF7-209ENST00000463244 MSL1Q68DK7 614 aa28.96■■■□□ 2.23
CPSF7-209ENST00000463244 PKD1L3Q7Z443 1732 aa28.96■■■□□ 2.23
CPSF7-209ENST00000463244 GRIN3BO60391 1043 aa28.95■■■□□ 2.22
CPSF7-209ENST00000463244 MPRIPQ6WCQ1 1025 aa28.95■■■□□ 2.22
CPSF7-209ENST00000463244 GIGYF1O75420 1035 aaPredicted RBP28.93■■■□□ 2.22
CPSF7-209ENST00000463244 FLAD1Q8NFF5 587 aa28.93■■■□□ 2.22
CPSF7-209ENST00000463244 C4BP0C0L5 1744 aa28.92■■■□□ 2.22
CPSF7-209ENST00000463244 EMILIN1Q9Y6C2 1016 aa28.92■■■□□ 2.22
CPSF7-209ENST00000463244 NCAPD2Q15021 1401 aa28.92■■■□□ 2.22
CPSF7-209ENST00000463244 CARD14Q9BXL6 1004 aa28.91■■■□□ 2.22
CPSF7-209ENST00000463244 ANKRD26Q9UPS8 1709 aa28.9■■■□□ 2.22
CPSF7-209ENST00000463244 CD2APQ9Y5K6 639 aa28.9■■■□□ 2.22
CPSF7-209ENST00000463244 NSD3Q9BZ95 1437 aa28.89■■■□□ 2.22
CPSF7-209ENST00000463244 SMARCC1Q92922 1105 aaPredicted RBP28.89■■■□□ 2.22
CPSF7-209ENST00000463244 UBR3Q6ZT12 1888 aa28.89■■■□□ 2.21
CPSF7-209ENST00000463244 NKX1-1Q15270 411 aaPredicted RBP28.86■■■□□ 2.21
CPSF7-209ENST00000463244 MAP2P11137 1827 aaKnown RBP28.85■■■□□ 2.21
CPSF7-209ENST00000463244 AMIGO3Q86WK7 504 aa28.85■■■□□ 2.21
CPSF7-209ENST00000463244 PIGBQ92521 554 aa28.85■■■□□ 2.21
CPSF7-209ENST00000463244 AK7Q96M32 723 aa28.85■■■□□ 2.21
CPSF7-209ENST00000463244 PPM1GO15355 546 aaPredicted RBP28.82■■■□□ 2.2
CPSF7-209ENST00000463244 SPG7Q9UQ90 795 aa28.82■■■□□ 2.2
CPSF7-209ENST00000463244 WASHC2AQ641Q2 1341 aa28.82■■■□□ 2.2
CPSF7-209ENST00000463244 ATP10DQ9P241 1426 aa28.79■■■□□ 2.2
CPSF7-209ENST00000463244 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.79■■■□□ 2.2
CPSF7-209ENST00000463244 PHF14O94880 888 aa28.79■■■□□ 2.2
CPSF7-209ENST00000463244 EYA1Q99502 592 aa28.79■■■□□ 2.2
CPSF7-209ENST00000463244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.79■■■□□ 2.2
CPSF7-209ENST00000463244 LOC102724428A0A0B4J2F2 783 aa28.78■■■□□ 2.2
CPSF7-209ENST00000463244 SIK1P57059 783 aa28.78■■■□□ 2.2
CPSF7-209ENST00000463244 SSFA2P28290 1259 aa28.77■■■□□ 2.2
CPSF7-209ENST00000463244 SMIM5Q71RC9 77 aa28.77■■■□□ 2.2
CPSF7-209ENST00000463244 LINC00116Q8NCU8 138 aa28.77■■■□□ 2.2
CPSF7-209ENST00000463244 TMOD3Q9NYL9 352 aa28.75■■■□□ 2.19
CPSF7-209ENST00000463244 POLKQ9UBT6 870 aa28.74■■■□□ 2.19
CPSF7-209ENST00000463244 ADCY9O60503 1353 aa28.74■■■□□ 2.19
CPSF7-209ENST00000463244 IGSF1Q8N6C5 1336 aa28.73■■■□□ 2.19
CPSF7-209ENST00000463244 IFNL2Q8IZJ0 200 aa28.73■■■□□ 2.19
CPSF7-209ENST00000463244 ASAP1Q9ULH1 1129 aa28.73■■■□□ 2.19
CPSF7-209ENST00000463244 PHKG2P15735 406 aa28.72■■■□□ 2.19
CPSF7-209ENST00000463244 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
CPSF7-209ENST00000463244 ITPK1Q13572 414 aa28.71■■■□□ 2.19
CPSF7-209ENST00000463244 GNPATO15228 680 aa28.69■■■□□ 2.18
CPSF7-209ENST00000463244 ATP6V1AP38606 617 aa28.69■■■□□ 2.18
CPSF7-209ENST00000463244 GPBP1L1Q9HC44 474 aaPredicted RBP28.69■■■□□ 2.18
CPSF7-209ENST00000463244 PLEKHG2Q9H7P9 1386 aa28.69■■■□□ 2.18
CPSF7-209ENST00000463244 EIF4A2Q14240 407 aaKnown RBP28.67■■■□□ 2.18
CPSF7-209ENST00000463244 ATG3Q9NT62 314 aa28.67■■■□□ 2.18
CPSF7-209ENST00000463244 TIMELESSQ9UNS1 1208 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms