RNA–Protein interactions for RNA: ENST00000463194.1

RFC2-203, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-203ENST00000463194 PTF1AQ7RTS3 328 aa26.46■■□□□ 1.83
RFC2-203ENST00000463194 DDX54Q8TDD1 881 aaKnown RBP26.46■■□□□ 1.83
RFC2-203ENST00000463194 CC2D1BQ5T0F9 858 aaKnown RBP26.43■■□□□ 1.82
RFC2-203ENST00000463194 KCNQ2O43526 872 aa26.42■■□□□ 1.82
RFC2-203ENST00000463194 ACSBG1Q96GR2 724 aa26.4■■□□□ 1.82
RFC2-203ENST00000463194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.39■■□□□ 1.82
RFC2-203ENST00000463194 IGSF1Q8N6C5 1336 aa26.39■■□□□ 1.81
RFC2-203ENST00000463194 NHSQ6T4R5 1651 aa26.38■■□□□ 1.81
RFC2-203ENST00000463194 SHANK3Q9BYB0 1731 aa26.37■■□□□ 1.81
RFC2-203ENST00000463194 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
RFC2-203ENST00000463194 MTHFSP49914 203 aa26.37■■□□□ 1.81
RFC2-203ENST00000463194 RGPD3A6NKT7 1758 aaPredicted RBP26.37■■□□□ 1.81
RFC2-203ENST00000463194 RGPD4Q7Z3J3 1758 aa26.37■■□□□ 1.81
RFC2-203ENST00000463194 PCDH11XQ9BZA7 1347 aa26.37■■□□□ 1.81
RFC2-203ENST00000463194 PCDH11YQ9BZA8 1340 aa26.37■■□□□ 1.81
RFC2-203ENST00000463194 RREB1Q92766 1687 aa26.35■■□□□ 1.81
RFC2-203ENST00000463194 PROM2Q8N271 834 aa26.35■■□□□ 1.81
RFC2-203ENST00000463194 SPG7Q9UQ90 795 aa26.35■■□□□ 1.81
RFC2-203ENST00000463194 CYP27B1O15528 508 aa26.34■■□□□ 1.81
RFC2-203ENST00000463194 IL13P35225 146 aa26.34■■□□□ 1.81
RFC2-203ENST00000463194 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
RFC2-203ENST00000463194 PRIM1P49642 420 aaKnown RBP26.32■■□□□ 1.8
RFC2-203ENST00000463194 NBPF14Q5TI25 921 aa26.32■■□□□ 1.8
RFC2-203ENST00000463194 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
RFC2-203ENST00000463194 PKD1L3Q7Z443 1732 aa26.31■■□□□ 1.8
RFC2-203ENST00000463194 NKX1-1Q15270 411 aaPredicted RBP26.3■■□□□ 1.8
RFC2-203ENST00000463194 TXNRD1Q16881 649 aa26.3■■□□□ 1.8
RFC2-203ENST00000463194 NUP188Q5SRE5 1749 aa26.29■■□□□ 1.8
RFC2-203ENST00000463194 PSDA5PKW4 1024 aaPredicted RBP26.28■■□□□ 1.8
RFC2-203ENST00000463194 R3HDM1Q15032 1099 aaKnown RBP26.28■■□□□ 1.8
RFC2-203ENST00000463194 SYTL4Q96C24 671 aaPredicted RBP26.27■■□□□ 1.8
RFC2-203ENST00000463194 KDRP35968 1356 aa26.27■■□□□ 1.8
RFC2-203ENST00000463194 BTAF1O14981 1849 aa26.27■■□□□ 1.8
RFC2-203ENST00000463194 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
RFC2-203ENST00000463194 DIAPH1O60610 1272 aaKnown RBP26.25■■□□□ 1.79
RFC2-203ENST00000463194 SULT6B1Q6IMI4 303 aa26.25■■□□□ 1.79
RFC2-203ENST00000463194 IFNL2Q8IZJ0 200 aa26.25■■□□□ 1.79
RFC2-203ENST00000463194 AMOTQ4VCS5 1084 aa26.24■■□□□ 1.79
RFC2-203ENST00000463194 PLEKHO1Q53GL0 409 aaPredicted RBP26.24■■□□□ 1.79
RFC2-203ENST00000463194 AEBP1Q8IUX7 1158 aa26.24■■□□□ 1.79
RFC2-203ENST00000463194 DOT1LQ8TEK3 1739 aa26.24■■□□□ 1.79
RFC2-203ENST00000463194 PHKG2P15735 406 aa26.23■■□□□ 1.79
RFC2-203ENST00000463194 SLC27A3Q5K4L6 730 aa26.2■■□□□ 1.78
RFC2-203ENST00000463194 COL3A1P02461 1466 aaPredicted RBP26.19■■□□□ 1.78
RFC2-203ENST00000463194 PPP2R1AP30153 589 aa26.19■■□□□ 1.78
RFC2-203ENST00000463194 ANO8Q9HCE9 1232 aaPredicted RBP26.19■■□□□ 1.78
RFC2-203ENST00000463194 HSP90AB1P08238 724 aaKnown RBP26.18■■□□□ 1.78
RFC2-203ENST00000463194 MPRIPQ6WCQ1 1025 aa26.17■■□□□ 1.78
RFC2-203ENST00000463194 CFAP53Q96M91 514 aa26.17■■□□□ 1.78
RFC2-203ENST00000463194 LRRC4BQ9NT99 713 aa26.17■■□□□ 1.78
RFC2-203ENST00000463194 STK32BQ9NY57 414 aa26.16■■□□□ 1.78
RFC2-203ENST00000463194 SLC15A2Q16348 729 aa26.15■■□□□ 1.78
RFC2-203ENST00000463194 ZNF530Q6P9A1 599 aaPredicted RBP26.15■■□□□ 1.78
RFC2-203ENST00000463194 DCAF5Q96JK2 942 aa26.15■■□□□ 1.78
RFC2-203ENST00000463194 PIGBQ92521 554 aa26.14■■□□□ 1.78
RFC2-203ENST00000463194 TOGARAM1Q9Y4F4 1720 aa26.14■■□□□ 1.77
RFC2-203ENST00000463194 HMOX1P09601 288 aa26.13■■□□□ 1.77
RFC2-203ENST00000463194 SMARCC1Q92922 1105 aaPredicted RBP26.13■■□□□ 1.77
RFC2-203ENST00000463194 ERVV-2B6SEH9 535 aa26.12■■□□□ 1.77
RFC2-203ENST00000463194 DDX10Q13206 875 aaKnown RBP26.12■■□□□ 1.77
RFC2-203ENST00000463194 HMGB2P26583 209 aaKnown RBP26.11■■□□□ 1.77
RFC2-203ENST00000463194 C1orf141Q5JVX7 400 aa26.11■■□□□ 1.77
RFC2-203ENST00000463194 TMOD3Q9NYL9 352 aa26.11■■□□□ 1.77
RFC2-203ENST00000463194 LY75O60449 1722 aa26.11■■□□□ 1.77
RFC2-203ENST00000463194 PAPPAQ13219 1627 aa26.1■■□□□ 1.77
RFC2-203ENST00000463194 ITGB4P16144 1822 aa26.1■■□□□ 1.77
RFC2-203ENST00000463194 U2SURPO15042 1029 aaKnown RBP26.1■■□□□ 1.77
RFC2-203ENST00000463194 CCNL1Q9UK58 526 aaPredicted RBP26.1■■□□□ 1.77
RFC2-203ENST00000463194 NUDCQ9Y266 331 aa26.09■■□□□ 1.77
RFC2-203ENST00000463194 LRP5O75197 1615 aa26.09■■□□□ 1.77
RFC2-203ENST00000463194 PALLDQ8WX93 1383 aa26.08■■□□□ 1.77
RFC2-203ENST00000463194 AKT1S1Q96B36 256 aa26.08■■□□□ 1.77
RFC2-203ENST00000463194 AKAP4Q5JQC9 854 aa26.07■■□□□ 1.76
RFC2-203ENST00000463194 KDM6AO15550 1401 aaPredicted RBP26.06■■□□□ 1.76
RFC2-203ENST00000463194 RALBP1Q15311 655 aa26.06■■□□□ 1.76
RFC2-203ENST00000463194 KCNQ4P56696 695 aa26.05■■□□□ 1.76
RFC2-203ENST00000463194 ZNF827Q17R98 1081 aa26.05■■□□□ 1.76
RFC2-203ENST00000463194 MTHFSDQ2M296 383 aaKnown RBP26.04■■□□□ 1.76
RFC2-203ENST00000463194 CABP4P57796 275 aa26.03■■□□□ 1.76
RFC2-203ENST00000463194 ASAP1Q9ULH1 1129 aa26.03■■□□□ 1.76
RFC2-203ENST00000463194 PDGFDQ9GZP0 370 aaPredicted RBP26.02■■□□□ 1.76
RFC2-203ENST00000463194 SPON1Q9HCB6 807 aa26.02■■□□□ 1.76
RFC2-203ENST00000463194 ATG3Q9NT62 314 aa26.02■■□□□ 1.76
RFC2-203ENST00000463194 CASZ1Q86V15 1759 aa26.01■■□□□ 1.75
RFC2-203ENST00000463194 RSPH6AQ9H0K4 717 aa26■■□□□ 1.75
RFC2-203ENST00000463194 LOC102724428A0A0B4J2F2 783 aa25.99■■□□□ 1.75
RFC2-203ENST00000463194 FCHSD2O94868 740 aa25.99■■□□□ 1.75
RFC2-203ENST00000463194 U2AF1L5P0DN76 240 aaPredicted RBP25.99■■□□□ 1.75
RFC2-203ENST00000463194 SIK1P57059 783 aa25.99■■□□□ 1.75
RFC2-203ENST00000463194 U2AF1Q01081 240 aaKnown RBP eCLIP25.99■■□□□ 1.75
RFC2-203ENST00000463194 NFATC2IPQ8NCF5 419 aa25.98■■□□□ 1.75
RFC2-203ENST00000463194 GAS2L2Q8NHY3 880 aa25.98■■□□□ 1.75
RFC2-203ENST00000463194 TFCP2L1Q9NZI6 479 aa25.98■■□□□ 1.75
RFC2-203ENST00000463194 SRCAPQ6ZRS2 3230 aa25.98■■□□□ 1.75
RFC2-203ENST00000463194 RNMTO43148 476 aaKnown RBP25.97■■□□□ 1.75
RFC2-203ENST00000463194 PRKAR2BP31323 418 aa25.97■■□□□ 1.75
RFC2-203ENST00000463194 LGR6Q9HBX8 967 aa25.97■■□□□ 1.75
RFC2-203ENST00000463194 PNPLA7Q6ZV29 1317 aa25.95■■□□□ 1.75
RFC2-203ENST00000463194 SLC16A10Q8TF71 515 aa25.95■■□□□ 1.74
RFC2-203ENST00000463194 PHACTR3Q96KR7 559 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms