RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 NBPF14Q5TI25 921 aa24.61■■□□□ 1.53
LINC00960-201ENST00000463183 SYTL4Q96C24 671 aaPredicted RBP24.6■■□□□ 1.53
LINC00960-201ENST00000463183 WASHC2AQ641Q2 1341 aa24.59■■□□□ 1.53
LINC00960-201ENST00000463183 RREB1Q92766 1687 aa24.59■■□□□ 1.53
LINC00960-201ENST00000463183 PLSCR1O15162 318 aa24.59■■□□□ 1.53
LINC00960-201ENST00000463183 NSD2O96028 1365 aa24.58■■□□□ 1.53
LINC00960-201ENST00000463183 NUP188Q5SRE5 1749 aa24.58■■□□□ 1.53
LINC00960-201ENST00000463183 NHSQ6T4R5 1651 aa24.56■■□□□ 1.52
LINC00960-201ENST00000463183 EYA1Q99502 592 aa24.55■■□□□ 1.52
LINC00960-201ENST00000463183 EIF4A2Q14240 407 aaKnown RBP24.54■■□□□ 1.52
LINC00960-201ENST00000463183 TXNRD1Q16881 649 aa24.54■■□□□ 1.52
LINC00960-201ENST00000463183 PRIM1P49642 420 aaKnown RBP24.53■■□□□ 1.52
LINC00960-201ENST00000463183 CC2D1BQ5T0F9 858 aaKnown RBP24.53■■□□□ 1.52
LINC00960-201ENST00000463183 PROM2Q8N271 834 aa24.53■■□□□ 1.52
LINC00960-201ENST00000463183 AMER1Q5JTC6 1135 aaPredicted RBP24.52■■□□□ 1.52
LINC00960-201ENST00000463183 ANO8Q9HCE9 1232 aaPredicted RBP24.51■■□□□ 1.51
LINC00960-201ENST00000463183 SHANK3Q9BYB0 1731 aa24.5■■□□□ 1.51
LINC00960-201ENST00000463183 PCDH11XQ9BZA7 1347 aa24.5■■□□□ 1.51
LINC00960-201ENST00000463183 PCDH11YQ9BZA8 1340 aa24.5■■□□□ 1.51
LINC00960-201ENST00000463183 RGPD3A6NKT7 1758 aaPredicted RBP24.5■■□□□ 1.51
LINC00960-201ENST00000463183 RGPD4Q7Z3J3 1758 aa24.5■■□□□ 1.51
LINC00960-201ENST00000463183 BTAF1O14981 1849 aa24.49■■□□□ 1.51
LINC00960-201ENST00000463183 DOT1LQ8TEK3 1739 aa24.48■■□□□ 1.51
LINC00960-201ENST00000463183 STK32BQ9NY57 414 aa24.46■■□□□ 1.51
LINC00960-201ENST00000463183 CYP27B1O15528 508 aa24.45■■□□□ 1.5
LINC00960-201ENST00000463183 PER1O15534 1290 aaPredicted RBP24.45■■□□□ 1.5
LINC00960-201ENST00000463183 SPG7Q9UQ90 795 aa24.45■■□□□ 1.5
LINC00960-201ENST00000463183 NCAPD2Q15021 1401 aa24.43■■□□□ 1.5
LINC00960-201ENST00000463183 KCNQ4P56696 695 aa24.42■■□□□ 1.5
LINC00960-201ENST00000463183 MPRIPQ6WCQ1 1025 aa24.41■■□□□ 1.5
LINC00960-201ENST00000463183 IGSF1Q8N6C5 1336 aa24.41■■□□□ 1.5
LINC00960-201ENST00000463183 MTHFSP49914 203 aa24.4■■□□□ 1.5
LINC00960-201ENST00000463183 LRP5O75197 1615 aa24.39■■□□□ 1.5
LINC00960-201ENST00000463183 SLC15A2Q16348 729 aa24.39■■□□□ 1.5
LINC00960-201ENST00000463183 AEBP1Q8IUX7 1158 aa24.39■■□□□ 1.5
LINC00960-201ENST00000463183 PDGFDQ9GZP0 370 aaPredicted RBP24.39■■□□□ 1.5
LINC00960-201ENST00000463183 LRRC4BQ9NT99 713 aa24.39■■□□□ 1.5
LINC00960-201ENST00000463183 PKD1L3Q7Z443 1732 aa24.38■■□□□ 1.49
LINC00960-201ENST00000463183 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
LINC00960-201ENST00000463183 ZBTB7AO95365 584 aa24.35■■□□□ 1.49
LINC00960-201ENST00000463183 IL13P35225 146 aa24.35■■□□□ 1.49
LINC00960-201ENST00000463183 IFNL2Q8IZJ0 200 aa24.35■■□□□ 1.49
LINC00960-201ENST00000463183 CCNL1Q9UK58 526 aaPredicted RBP24.35■■□□□ 1.49
LINC00960-201ENST00000463183 PHKG2P15735 406 aa24.35■■□□□ 1.49
LINC00960-201ENST00000463183 ZNF827Q17R98 1081 aa24.35■■□□□ 1.49
LINC00960-201ENST00000463183 SLC27A3Q5K4L6 730 aa24.35■■□□□ 1.49
LINC00960-201ENST00000463183 SPON1Q9HCB6 807 aa24.35■■□□□ 1.49
LINC00960-201ENST00000463183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.35■■□□□ 1.49
LINC00960-201ENST00000463183 PLEKHO1Q53GL0 409 aaPredicted RBP24.33■■□□□ 1.48
LINC00960-201ENST00000463183 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.48
LINC00960-201ENST00000463183 TOGARAM1Q9Y4F4 1720 aa24.32■■□□□ 1.48
LINC00960-201ENST00000463183 ZNF530Q6P9A1 599 aaPredicted RBP24.32■■□□□ 1.48
LINC00960-201ENST00000463183 ATF5Q9Y2D1 282 aaPredicted RBP24.32■■□□□ 1.48
LINC00960-201ENST00000463183 HMOX1P09601 288 aa24.31■■□□□ 1.48
LINC00960-201ENST00000463183 NKX1-1Q15270 411 aaPredicted RBP24.31■■□□□ 1.48
LINC00960-201ENST00000463183 DIAPH1O60610 1272 aaKnown RBP24.3■■□□□ 1.48
LINC00960-201ENST00000463183 PIGBQ92521 554 aa24.3■■□□□ 1.48
LINC00960-201ENST00000463183 TMOD3Q9NYL9 352 aa24.3■■□□□ 1.48
LINC00960-201ENST00000463183 PALLDQ8WX93 1383 aa24.3■■□□□ 1.48
LINC00960-201ENST00000463183 NPC1L1Q9UHC9 1359 aa24.3■■□□□ 1.48
LINC00960-201ENST00000463183 PAPPAQ13219 1627 aa24.3■■□□□ 1.48
LINC00960-201ENST00000463183 TFCP2L1Q9NZI6 479 aa24.29■■□□□ 1.48
LINC00960-201ENST00000463183 ITGB4P16144 1822 aa24.27■■□□□ 1.48
LINC00960-201ENST00000463183 AMOTQ4VCS5 1084 aa24.27■■□□□ 1.48
LINC00960-201ENST00000463183 C1orf141Q5JVX7 400 aa24.27■■□□□ 1.48
LINC00960-201ENST00000463183 AKT1S1Q96B36 256 aa24.27■■□□□ 1.48
LINC00960-201ENST00000463183 CASZ1Q86V15 1759 aa24.27■■□□□ 1.48
LINC00960-201ENST00000463183 LY75O60449 1722 aa24.27■■□□□ 1.48
LINC00960-201ENST00000463183 U2SURPO15042 1029 aaKnown RBP24.26■■□□□ 1.47
LINC00960-201ENST00000463183 SMARCC1Q92922 1105 aaPredicted RBP24.25■■□□□ 1.47
LINC00960-201ENST00000463183 MSH5O43196 834 aa24.24■■□□□ 1.47
LINC00960-201ENST00000463183 HSP90AB1P08238 724 aaKnown RBP24.23■■□□□ 1.47
LINC00960-201ENST00000463183 ASAP1Q9ULH1 1129 aa24.23■■□□□ 1.47
LINC00960-201ENST00000463183 KDRP35968 1356 aa24.23■■□□□ 1.47
LINC00960-201ENST00000463183 DCAF5Q96JK2 942 aa24.22■■□□□ 1.47
LINC00960-201ENST00000463183 PLEKHG2Q9H7P9 1386 aa24.22■■□□□ 1.47
LINC00960-201ENST00000463183 MTFR1LQ9H019 292 aa24.21■■□□□ 1.47
LINC00960-201ENST00000463183 PNPLA7Q6ZV29 1317 aa24.2■■□□□ 1.47
LINC00960-201ENST00000463183 CABP4P57796 275 aa24.2■■□□□ 1.46
LINC00960-201ENST00000463183 CFAP53Q96M91 514 aa24.2■■□□□ 1.46
LINC00960-201ENST00000463183 KDM6AO15550 1401 aaPredicted RBP24.19■■□□□ 1.46
LINC00960-201ENST00000463183 LOC102724428A0A0B4J2F2 783 aa24.18■■□□□ 1.46
LINC00960-201ENST00000463183 ERVV-2B6SEH9 535 aa24.18■■□□□ 1.46
LINC00960-201ENST00000463183 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
LINC00960-201ENST00000463183 SIK1P57059 783 aa24.18■■□□□ 1.46
LINC00960-201ENST00000463183 ATG3Q9NT62 314 aa24.18■■□□□ 1.46
LINC00960-201ENST00000463183 COL3A1P02461 1466 aaPredicted RBP24.18■■□□□ 1.46
LINC00960-201ENST00000463183 PTGER2P43116 358 aa24.17■■□□□ 1.46
LINC00960-201ENST00000463183 C5P01031 1676 aa24.16■■□□□ 1.46
LINC00960-201ENST00000463183 AK7Q96M32 723 aa24.16■■□□□ 1.46
LINC00960-201ENST00000463183 RBM42Q9BTD8 480 aaKnown RBP24.16■■□□□ 1.46
LINC00960-201ENST00000463183 TUBGCP6Q96RT7 1819 aa24.15■■□□□ 1.46
LINC00960-201ENST00000463183 ATP6V1AP38606 617 aa24.15■■□□□ 1.46
LINC00960-201ENST00000463183 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.46
LINC00960-201ENST00000463183 AKAP4Q5JQC9 854 aa24.14■■□□□ 1.46
LINC00960-201ENST00000463183 PHF14O94880 888 aa24.13■■□□□ 1.45
LINC00960-201ENST00000463183 COL23A1Q86Y22 540 aaPredicted RBP24.13■■□□□ 1.45
LINC00960-201ENST00000463183 KLHL34Q8N239 644 aa24.13■■□□□ 1.45
LINC00960-201ENST00000463183 NFATC2IPQ8NCF5 419 aa24.13■■□□□ 1.45
LINC00960-201ENST00000463183 SMIM5Q71RC9 77 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms