RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 MLLT3P42568 568 aaPredicted RBP11.87□□□□□ -0.51
VPS45-205ENST00000462852 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
VPS45-205ENST00000462852 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
VPS45-205ENST00000462852 XIRP1Q702N8 1843 aaKnown RBP11.87□□□□□ -0.51
VPS45-205ENST00000462852 MSH6P52701 1360 aa11.87□□□□□ -0.51
VPS45-205ENST00000462852 PTPN5P54829 565 aa11.86□□□□□ -0.51
VPS45-205ENST00000462852 BCANQ96GW7 911 aa11.86□□□□□ -0.51
VPS45-205ENST00000462852 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
VPS45-205ENST00000462852 EIF3AQ14152 1382 aaKnown RBP11.86□□□□□ -0.51
VPS45-205ENST00000462852 ABCC11Q96J66 1382 aa11.85□□□□□ -0.51
VPS45-205ENST00000462852 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
VPS45-205ENST00000462852 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
VPS45-205ENST00000462852 LAPTM4BQ86VI4 370 aa11.85□□□□□ -0.51
VPS45-205ENST00000462852 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
VPS45-205ENST00000462852 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.84□□□□□ -0.51
VPS45-205ENST00000462852 FAM198AQ9UFP1 575 aa11.84□□□□□ -0.51
VPS45-205ENST00000462852 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
VPS45-205ENST00000462852 CDC42BPGQ6DT37 1551 aa11.84□□□□□ -0.51
VPS45-205ENST00000462852 NRKQ7Z2Y5 1582 aa11.84□□□□□ -0.51
VPS45-205ENST00000462852 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
VPS45-205ENST00000462852 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
VPS45-205ENST00000462852 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
VPS45-205ENST00000462852 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
VPS45-205ENST00000462852 POTEAQ6S8J7 498 aa11.83□□□□□ -0.52
VPS45-205ENST00000462852 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
VPS45-205ENST00000462852 JCADQ9P266 1359 aa11.82□□□□□ -0.52
VPS45-205ENST00000462852 PRSS12P56730 875 aa11.82□□□□□ -0.52
VPS45-205ENST00000462852 ZFRQ96KR1 1074 aaKnown RBP11.82□□□□□ -0.52
VPS45-205ENST00000462852 SLAIN2Q9P270 581 aa11.82□□□□□ -0.52
VPS45-205ENST00000462852 MON2Q7Z3U7 1717 aa11.82□□□□□ -0.52
VPS45-205ENST00000462852 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
VPS45-205ENST00000462852 PIK3R4Q99570 1358 aa11.81□□□□□ -0.52
VPS45-205ENST00000462852 ANKK1Q8NFD2 765 aa11.81□□□□□ -0.52
VPS45-205ENST00000462852 ATP7BP35670 1465 aa11.81□□□□□ -0.52
VPS45-205ENST00000462852 NCOA3Q9Y6Q9 1424 aa11.8□□□□□ -0.52
VPS45-205ENST00000462852 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
VPS45-205ENST00000462852 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
VPS45-205ENST00000462852 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
VPS45-205ENST00000462852 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
VPS45-205ENST00000462852 ITSN1Q15811 1721 aa11.8□□□□□ -0.52
VPS45-205ENST00000462852 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
VPS45-205ENST00000462852 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
VPS45-205ENST00000462852 BCAMP50895 628 aa11.79□□□□□ -0.52
VPS45-205ENST00000462852 PACS2Q86VP3 889 aa11.79□□□□□ -0.52
VPS45-205ENST00000462852 ANKRD26Q9UPS8 1709 aa11.79□□□□□ -0.52
VPS45-205ENST00000462852 TBX22Q9Y458 520 aa11.78□□□□□ -0.52
VPS45-205ENST00000462852 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.52
VPS45-205ENST00000462852 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
VPS45-205ENST00000462852 SEMA3EO15041 775 aa11.77□□□□□ -0.53
VPS45-205ENST00000462852 C14orf37Q86TY3 774 aa11.77□□□□□ -0.53
VPS45-205ENST00000462852 SPATA31A6Q5VVP1 1343 aa11.77□□□□□ -0.53
VPS45-205ENST00000462852 PHLPP1O60346 1717 aa11.77□□□□□ -0.53
VPS45-205ENST00000462852 SMAPO00193 183 aa11.76□□□□□ -0.53
VPS45-205ENST00000462852 TRAK1Q9UPV9 953 aa11.76□□□□□ -0.53
VPS45-205ENST00000462852 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
VPS45-205ENST00000462852 ATF3P18847 181 aa11.75□□□□□ -0.53
VPS45-205ENST00000462852 MEX3CQ5U5Q3 659 aaKnown RBP11.75□□□□□ -0.53
VPS45-205ENST00000462852 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
VPS45-205ENST00000462852 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
VPS45-205ENST00000462852 USP54Q70EL1 1684 aa11.75□□□□□ -0.53
VPS45-205ENST00000462852 MARF1Q9Y4F3 1742 aaKnown RBP11.74□□□□□ -0.53
VPS45-205ENST00000462852 TTC13Q8NBP0 860 aa11.74□□□□□ -0.53
VPS45-205ENST00000462852 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
VPS45-205ENST00000462852 ADGRL3Q9HAR2 1447 aa11.74□□□□□ -0.53
VPS45-205ENST00000462852 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
VPS45-205ENST00000462852 DIEXFQ68CQ4 756 aaKnown RBP11.73□□□□□ -0.53
VPS45-205ENST00000462852 TATDN2Q93075 761 aa11.73□□□□□ -0.53
VPS45-205ENST00000462852 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
VPS45-205ENST00000462852 PADI6Q6TGC4 694 aa11.72□□□□□ -0.53
VPS45-205ENST00000462852 SIRT1Q96EB6 747 aa11.72□□□□□ -0.53
VPS45-205ENST00000462852 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.53
VPS45-205ENST00000462852 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
VPS45-205ENST00000462852 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.53
VPS45-205ENST00000462852 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
VPS45-205ENST00000462852 TMF1P82094 1093 aa11.7□□□□□ -0.54
VPS45-205ENST00000462852 WBP1LQ9NX94 342 aa11.7□□□□□ -0.54
VPS45-205ENST00000462852 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
VPS45-205ENST00000462852 STK26Q9P289 416 aa11.7□□□□□ -0.54
VPS45-205ENST00000462852 LRP6O75581 1613 aa11.7□□□□□ -0.54
VPS45-205ENST00000462852 DCCP43146 1447 aa11.69□□□□□ -0.54
VPS45-205ENST00000462852 PRR36Q9H6K5 1346 aa11.69□□□□□ -0.54
VPS45-205ENST00000462852 PTGDRQ13258 359 aa11.69□□□□□ -0.54
VPS45-205ENST00000462852 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
VPS45-205ENST00000462852 WAPLQ7Z5K2 1190 aa11.69□□□□□ -0.54
VPS45-205ENST00000462852 LRCH3Q96II8 777 aa11.69□□□□□ -0.54
VPS45-205ENST00000462852 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
VPS45-205ENST00000462852 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
VPS45-205ENST00000462852 AMOTL2Q9Y2J4 779 aa11.68□□□□□ -0.54
VPS45-205ENST00000462852 TRPM3Q9HCF6 1732 aaPredicted RBP11.68□□□□□ -0.54
VPS45-205ENST00000462852 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
VPS45-205ENST00000462852 CPSF1Q10570 1443 aaKnown RBP11.68□□□□□ -0.54
VPS45-205ENST00000462852 ANKARQ7Z5J8 1434 aa11.68□□□□□ -0.54
VPS45-205ENST00000462852 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
VPS45-205ENST00000462852 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
VPS45-205ENST00000462852 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
VPS45-205ENST00000462852 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
VPS45-205ENST00000462852 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
VPS45-205ENST00000462852 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
VPS45-205ENST00000462852 RXRBP28702 533 aa11.67□□□□□ -0.54
VPS45-205ENST00000462852 BRINP3Q76B58 766 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms