RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 KRT32Q14532 448 aa18.64■□□□□ 0.57
SMC4-204ENST00000462787 FAM177A1Q8N128 213 aaPredicted RBP18.64■□□□□ 0.57
SMC4-204ENST00000462787 NOL7Q9UMY1 257 aaKnown RBP18.64■□□□□ 0.57
SMC4-204ENST00000462787 EID1Q9Y6B2 187 aa18.64■□□□□ 0.57
SMC4-204ENST00000462787 STK3Q13188 491 aa18.63■□□□□ 0.57
SMC4-204ENST00000462787 MX1P20591 662 aa18.63■□□□□ 0.57
SMC4-204ENST00000462787 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
SMC4-204ENST00000462787 ARHGAP5Q13017 1502 aa18.63■□□□□ 0.57
SMC4-204ENST00000462787 KDM2BQ8NHM5 1336 aa18.63■□□□□ 0.57
SMC4-204ENST00000462787 CASTP20810 708 aaKnown RBP18.63■□□□□ 0.57
SMC4-204ENST00000462787 CCDC102AQ96A19 550 aa18.63■□□□□ 0.57
SMC4-204ENST00000462787 BBXQ8WY36 941 aaPredicted RBP18.62■□□□□ 0.57
SMC4-204ENST00000462787 LIMCH1Q9UPQ0 1083 aa18.62■□□□□ 0.57
SMC4-204ENST00000462787 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
SMC4-204ENST00000462787 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
SMC4-204ENST00000462787 CCDC83Q8IWF9 413 aa18.61■□□□□ 0.57
SMC4-204ENST00000462787 DNAJC2Q99543 621 aaKnown RBP18.61■□□□□ 0.57
SMC4-204ENST00000462787 XBP1P17861 261 aa18.61■□□□□ 0.57
SMC4-204ENST00000462787 CCDC171Q6TFL3 1326 aa18.61■□□□□ 0.57
SMC4-204ENST00000462787 GTF2F1P35269 517 aaKnown RBP eCLIP18.61■□□□□ 0.578e-49■■■■■ 172.1
SMC4-204ENST00000462787 CEP135Q66GS9 1140 aa18.61■□□□□ 0.57
SMC4-204ENST00000462787 FEZ1Q99689 392 aa18.61■□□□□ 0.57
SMC4-204ENST00000462787 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
SMC4-204ENST00000462787 CCDC141Q6ZP82 1450 aa18.6■□□□□ 0.57
SMC4-204ENST00000462787 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
SMC4-204ENST00000462787 FAM107BQ9H098 131 aa18.6■□□□□ 0.57
SMC4-204ENST00000462787 BRMS1Q9HCU9 246 aa18.6■□□□□ 0.57
SMC4-204ENST00000462787 KIF20AO95235 890 aa18.6■□□□□ 0.57
SMC4-204ENST00000462787 WASHC4Q2M389 1173 aa18.6■□□□□ 0.57
SMC4-204ENST00000462787 TTC22Q5TAA0 569 aa18.6■□□□□ 0.57
SMC4-204ENST00000462787 TTC5Q8N0Z6 440 aa18.6■□□□□ 0.57
SMC4-204ENST00000462787 SEC24BO95487 1268 aa18.59■□□□□ 0.57
SMC4-204ENST00000462787 NEUROD6Q96NK8 337 aa18.59■□□□□ 0.57
SMC4-204ENST00000462787 URI1O94763 535 aaPredicted RBP18.59■□□□□ 0.57
SMC4-204ENST00000462787 IQCEQ6IPM2 695 aa18.59■□□□□ 0.57
SMC4-204ENST00000462787 RIC3Q7Z5B4 369 aa18.59■□□□□ 0.57
SMC4-204ENST00000462787 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
SMC4-204ENST00000462787 STX6O43752 255 aa18.59■□□□□ 0.57
SMC4-204ENST00000462787 MAP4K4O95819 1239 aaPredicted RBP18.59■□□□□ 0.57
SMC4-204ENST00000462787 IL16Q14005 1332 aa18.59■□□□□ 0.57
SMC4-204ENST00000462787 ZNHIT6Q9NWK9 470 aaKnown RBP18.58■□□□□ 0.57
SMC4-204ENST00000462787 POLR3GO15318 223 aaPredicted RBP18.58■□□□□ 0.57
SMC4-204ENST00000462787 FERMT3Q86UX7 667 aa18.58■□□□□ 0.57
SMC4-204ENST00000462787 MYO6Q9UM54 1294 aa18.58■□□□□ 0.56
SMC4-204ENST00000462787 DISP3Q9P2K9 1392 aa18.58■□□□□ 0.56
SMC4-204ENST00000462787 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
SMC4-204ENST00000462787 SKIDA1Q1XH10 827 aa18.58■□□□□ 0.56
SMC4-204ENST00000462787 TXLNBQ8N3L3 684 aa18.58■□□□□ 0.56
SMC4-204ENST00000462787 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
SMC4-204ENST00000462787 PDE4CQ08493 712 aa18.57■□□□□ 0.56
SMC4-204ENST00000462787 SMARCA5O60264 1052 aaPredicted RBP18.57■□□□□ 0.56
SMC4-204ENST00000462787 RAB11FIP3O75154 756 aa18.57■□□□□ 0.56
SMC4-204ENST00000462787 CDK13Q14004 1512 aaKnown RBP18.57■□□□□ 0.56
SMC4-204ENST00000462787 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
SMC4-204ENST00000462787 CFAP100Q494V2 611 aa18.57■□□□□ 0.56
SMC4-204ENST00000462787 EXOC6BQ9Y2D4 811 aa18.57■□□□□ 0.56
SMC4-204ENST00000462787 ZNF830Q96NB3 372 aaPredicted RBP18.57■□□□□ 0.56
SMC4-204ENST00000462787 GOLGA6L10A6NI86 522 aa18.56■□□□□ 0.56
SMC4-204ENST00000462787 TMX3Q96JJ7 454 aa18.56■□□□□ 0.56
SMC4-204ENST00000462787 BRPF1P55201 1214 aaPredicted RBP18.56■□□□□ 0.56
SMC4-204ENST00000462787 RRP12Q5JTH9 1297 aaKnown RBP18.56■□□□□ 0.56
SMC4-204ENST00000462787 OGFRQ9NZT2 677 aa18.56■□□□□ 0.56
SMC4-204ENST00000462787 CASQ1P31415 396 aa18.56■□□□□ 0.56
SMC4-204ENST00000462787 CAMSAP2Q08AD1 1489 aa18.56■□□□□ 0.56
SMC4-204ENST00000462787 TRERF1Q96PN7 1200 aa18.56■□□□□ 0.56
SMC4-204ENST00000462787 IL1RAPL2Q9NP60 686 aa18.56■□□□□ 0.56
SMC4-204ENST00000462787 MAGEC2Q9UBF1 373 aaPredicted RBP18.56■□□□□ 0.56
SMC4-204ENST00000462787 POTEB2H3BUK9 544 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 HSP90AB3PQ58FF7 597 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 CKAP2LQ8IYA6 745 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 TRMT1Q9NXH9 659 aaKnown RBP18.55■□□□□ 0.56
SMC4-204ENST00000462787 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 SNW1Q13573 536 aaKnown RBP18.55■□□□□ 0.56
SMC4-204ENST00000462787 ZNF165P49910 485 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 HDGFL1Q5TGJ6 251 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
SMC4-204ENST00000462787 JAKMIP3Q5VZ66 844 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
SMC4-204ENST00000462787 SRGAP3O43295 1099 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 ARHGAP29Q52LW3 1261 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 MCM3P25205 808 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 MAP9Q49MG5 647 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 KIF1BPQ96EK5 621 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 STX1AQ16623 288 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 FAM200AQ8TCP9 573 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 ARHGAP45Q92619 1136 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 CRACR2AQ9BSW2 395 aa18.54■□□□□ 0.56
SMC4-204ENST00000462787 RPGRIP1LQ68CZ1 1315 aa18.53■□□□□ 0.56
SMC4-204ENST00000462787 TTC12Q9H892 705 aaPredicted RBP18.53■□□□□ 0.56
SMC4-204ENST00000462787 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMC4-204ENST00000462787 GOLGA6L9A6NEM1 432 aa18.53■□□□□ 0.56
SMC4-204ENST00000462787 SART3Q15020 963 aaKnown RBP18.53■□□□□ 0.56
SMC4-204ENST00000462787 EPB41L2O43491 1005 aaKnown RBP18.52■□□□□ 0.56
SMC4-204ENST00000462787 TUBB4AP04350 444 aa18.52■□□□□ 0.56
SMC4-204ENST00000462787 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
SMC4-204ENST00000462787 ZNF445P59923 1031 aa18.52■□□□□ 0.56
SMC4-204ENST00000462787 ANAPC15P60006 121 aa18.52■□□□□ 0.56
SMC4-204ENST00000462787 GIMAP7Q8NHV1 300 aa18.52■□□□□ 0.56
SMC4-204ENST00000462787 INSRP06213 1382 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms