RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PPP2R1AP30153 589 aa12.81□□□□□ -0.36
PKP4-208ENST00000462335 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
PKP4-208ENST00000462335 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
PKP4-208ENST00000462335 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
PKP4-208ENST00000462335 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
PKP4-208ENST00000462335 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
PKP4-208ENST00000462335 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
PKP4-208ENST00000462335 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
PKP4-208ENST00000462335 DEFB132Q7Z7B7 95 aa12.8□□□□□ -0.36
PKP4-208ENST00000462335 DISP2A7MBM2 1401 aa12.79□□□□□ -0.36
PKP4-208ENST00000462335 HMOX1P09601 288 aa12.79□□□□□ -0.36
PKP4-208ENST00000462335 IL13P35225 146 aa12.79□□□□□ -0.36
PKP4-208ENST00000462335 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
PKP4-208ENST00000462335 HSP90AB1P08238 724 aaKnown RBP12.78□□□□□ -0.36
PKP4-208ENST00000462335 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
PKP4-208ENST00000462335 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
PKP4-208ENST00000462335 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
PKP4-208ENST00000462335 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
PKP4-208ENST00000462335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.367e-9■□□□□ 10.5
PKP4-208ENST00000462335 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
PKP4-208ENST00000462335 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
PKP4-208ENST00000462335 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
PKP4-208ENST00000462335 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
PKP4-208ENST00000462335 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
PKP4-208ENST00000462335 IGSF1Q8N6C5 1336 aa12.77□□□□□ -0.37
PKP4-208ENST00000462335 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
PKP4-208ENST00000462335 ANP32CO43423 234 aa12.76□□□□□ -0.37
PKP4-208ENST00000462335 MEGF6O75095 1541 aa12.76□□□□□ -0.37
PKP4-208ENST00000462335 KCNQ2O43526 872 aa12.75□□□□□ -0.37
PKP4-208ENST00000462335 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
PKP4-208ENST00000462335 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
PKP4-208ENST00000462335 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
PKP4-208ENST00000462335 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
PKP4-208ENST00000462335 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
PKP4-208ENST00000462335 PLSCR1O15162 318 aa12.73□□□□□ -0.37
PKP4-208ENST00000462335 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
PKP4-208ENST00000462335 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
PKP4-208ENST00000462335 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
PKP4-208ENST00000462335 CYP27B1O15528 508 aa12.72□□□□□ -0.37
PKP4-208ENST00000462335 PHKG2P15735 406 aa12.72□□□□□ -0.37
PKP4-208ENST00000462335 CABP4P57796 275 aa12.72□□□□□ -0.37
PKP4-208ENST00000462335 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
PKP4-208ENST00000462335 EP400Q96L91 3159 aa12.72□□□□□ -0.37
PKP4-208ENST00000462335 BCL9O00512 1426 aa12.71□□□□□ -0.37
PKP4-208ENST00000462335 FCHSD2O94868 740 aa12.71□□□□□ -0.37
PKP4-208ENST00000462335 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.37
PKP4-208ENST00000462335 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
PKP4-208ENST00000462335 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
PKP4-208ENST00000462335 MAPK8IP3Q9UPT6 1336 aa12.7□□□□□ -0.38
PKP4-208ENST00000462335 PRKAR2BP31323 418 aa12.7□□□□□ -0.38
PKP4-208ENST00000462335 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
PKP4-208ENST00000462335 CAMKK2Q96RR4 588 aa12.7□□□□□ -0.38
PKP4-208ENST00000462335 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
PKP4-208ENST00000462335 PLEKHG2Q9H7P9 1386 aa12.69□□□□□ -0.38
PKP4-208ENST00000462335 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
PKP4-208ENST00000462335 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
PKP4-208ENST00000462335 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
PKP4-208ENST00000462335 PTF1AQ7RTS3 328 aa12.69□□□□□ -0.38
PKP4-208ENST00000462335 STK32BQ9NY57 414 aa12.69□□□□□ -0.38
PKP4-208ENST00000462335 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
PKP4-208ENST00000462335 NCAPD2Q15021 1401 aa12.68□□□□□ -0.38
PKP4-208ENST00000462335 KDRP35968 1356 aa12.68□□□□□ -0.38
PKP4-208ENST00000462335 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
PKP4-208ENST00000462335 TEFQ10587 303 aa12.67□□□□□ -0.38
PKP4-208ENST00000462335 MTHFSDQ2M296 383 aaKnown RBP12.67□□□□□ -0.38
PKP4-208ENST00000462335 SLC27A3Q5K4L6 730 aa12.67□□□□□ -0.38
PKP4-208ENST00000462335 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
PKP4-208ENST00000462335 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
PKP4-208ENST00000462335 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
PKP4-208ENST00000462335 PIGBQ92521 554 aa12.66□□□□□ -0.38
PKP4-208ENST00000462335 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
PKP4-208ENST00000462335 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
PKP4-208ENST00000462335 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
PKP4-208ENST00000462335 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
PKP4-208ENST00000462335 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
PKP4-208ENST00000462335 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
PKP4-208ENST00000462335 MSH5O43196 834 aa12.64□□□□□ -0.39
PKP4-208ENST00000462335 DOT1LQ8TEK3 1739 aa12.64□□□□□ -0.39
PKP4-208ENST00000462335 BTAF1O14981 1849 aa12.63□□□□□ -0.39
PKP4-208ENST00000462335 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
PKP4-208ENST00000462335 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
PKP4-208ENST00000462335 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
PKP4-208ENST00000462335 TFCP2L1Q9NZI6 479 aa12.63□□□□□ -0.39
PKP4-208ENST00000462335 COL3A1P02461 1466 aaPredicted RBP12.63□□□□□ -0.39
PKP4-208ENST00000462335 PALLDQ8WX93 1383 aa12.62□□□□□ -0.39
PKP4-208ENST00000462335 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
PKP4-208ENST00000462335 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
PKP4-208ENST00000462335 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
PKP4-208ENST00000462335 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
PKP4-208ENST00000462335 ASAP1Q9ULH1 1129 aa12.62□□□□□ -0.39
PKP4-208ENST00000462335 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
PKP4-208ENST00000462335 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
PKP4-208ENST00000462335 KCNQ4P56696 695 aa12.61□□□□□ -0.39
PKP4-208ENST00000462335 AK7Q96M32 723 aa12.61□□□□□ -0.39
PKP4-208ENST00000462335 SLC52A2Q9HAB3 445 aa12.61□□□□□ -0.39
PKP4-208ENST00000462335 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 HTATSF1O43719 755 aaKnown RBP12.6□□□□□ -0.39
PKP4-208ENST00000462335 SIK1P57059 783 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
PKP4-208ENST00000462335 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms