RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
RER1-206ENST00000462129 AKT1S1Q96B36 256 aa24.68■■□□□ 1.54
RER1-206ENST00000462129 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
RER1-206ENST00000462129 POLD1P28340 1107 aa24.67■■□□□ 1.54
RER1-206ENST00000462129 DDX54Q8TDD1 881 aaKnown RBP24.67■■□□□ 1.54
RER1-206ENST00000462129 QSER1Q2KHR3 1735 aa24.66■■□□□ 1.54
RER1-206ENST00000462129 SLC27A3Q5K4L6 730 aa24.66■■□□□ 1.54
RER1-206ENST00000462129 SLC16A10Q8TF71 515 aa24.66■■□□□ 1.54
RER1-206ENST00000462129 EDC4Q6P2E9 1401 aaKnown RBP24.65■■□□□ 1.54
RER1-206ENST00000462129 PNPLA7Q6ZV29 1317 aa24.64■■□□□ 1.54
RER1-206ENST00000462129 GIGYF1O75420 1035 aaPredicted RBP24.63■■□□□ 1.53
RER1-206ENST00000462129 LTV1Q96GA3 475 aaPredicted RBP24.63■■□□□ 1.53
RER1-206ENST00000462129 TUBGCP6Q96RT7 1819 aa24.63■■□□□ 1.53
RER1-206ENST00000462129 SYTL4Q96C24 671 aaPredicted RBP24.62■■□□□ 1.53
RER1-206ENST00000462129 PANK3Q9H999 370 aa24.62■■□□□ 1.53
RER1-206ENST00000462129 TFCP2L1Q9NZI6 479 aa24.62■■□□□ 1.53
RER1-206ENST00000462129 KCNQ4P56696 695 aa24.61■■□□□ 1.53
RER1-206ENST00000462129 FAM208AQ9UK61 1670 aaKnown RBP24.61■■□□□ 1.53
RER1-206ENST00000462129 COL24A1Q17RW2 1714 aa24.61■■□□□ 1.53
RER1-206ENST00000462129 DOT1LQ8TEK3 1739 aa24.6■■□□□ 1.53
RER1-206ENST00000462129 NLGN2Q8NFZ4 835 aa24.59■■□□□ 1.53
RER1-206ENST00000462129 IP6K1Q92551 441 aa24.59■■□□□ 1.53
RER1-206ENST00000462129 NSD3Q9BZ95 1437 aa24.59■■□□□ 1.53
RER1-206ENST00000462129 PRIM1P49642 420 aaKnown RBP24.58■■□□□ 1.53
RER1-206ENST00000462129 KNSTRNQ9Y448 316 aa24.58■■□□□ 1.53
RER1-206ENST00000462129 CGNL1Q0VF96 1302 aa24.57■■□□□ 1.52
RER1-206ENST00000462129 NSD2O96028 1365 aa24.55■■□□□ 1.52
RER1-206ENST00000462129 LY75O60449 1722 aa24.55■■□□□ 1.52
RER1-206ENST00000462129 SHANK3Q9BYB0 1731 aa24.55■■□□□ 1.52
RER1-206ENST00000462129 GOLGB1Q14789 3259 aaKnown RBP24.53■■□□□ 1.52
RER1-206ENST00000462129 MSH5O43196 834 aa24.53■■□□□ 1.52
RER1-206ENST00000462129 CCNL1Q9UK58 526 aaPredicted RBP24.53■■□□□ 1.52
RER1-206ENST00000462129 KIF20BQ96Q89 1820 aa24.52■■□□□ 1.52
RER1-206ENST00000462129 MEGF6O75095 1541 aa24.51■■□□□ 1.51
RER1-206ENST00000462129 DDX10Q13206 875 aaKnown RBP24.51■■□□□ 1.51
RER1-206ENST00000462129 COG3Q96JB2 828 aa24.51■■□□□ 1.51
RER1-206ENST00000462129 CARD14Q9BXL6 1004 aa24.51■■□□□ 1.51
RER1-206ENST00000462129 MAP3K19Q56UN5 1328 aa24.51■■□□□ 1.51
RER1-206ENST00000462129 YBX3P16989 372 aaKnown RBP eCLIP24.5■■□□□ 1.515e-7■■□□□ 12.5
RER1-206ENST00000462129 HOXC9P31274 260 aa24.5■■□□□ 1.51
RER1-206ENST00000462129 AMPHP49418 695 aa24.5■■□□□ 1.51
RER1-206ENST00000462129 ZCRB1Q8TBF4 217 aaKnown RBP24.5■■□□□ 1.51
RER1-206ENST00000462129 GRIN3BO60391 1043 aa24.49■■□□□ 1.51
RER1-206ENST00000462129 RGPD2P0DJD1 1756 aa24.49■■□□□ 1.51
RER1-206ENST00000462129 MSL1Q68DK7 614 aa24.48■■□□□ 1.51
RER1-206ENST00000462129 COL23A1Q86Y22 540 aaPredicted RBP24.47■■□□□ 1.51
RER1-206ENST00000462129 FBLN1P23142 703 aa24.46■■□□□ 1.51
RER1-206ENST00000462129 GGNBP2Q9H3C7 697 aa24.46■■□□□ 1.51
RER1-206ENST00000462129 FYB1O15117 783 aa24.45■■□□□ 1.5
RER1-206ENST00000462129 ATP10DQ9P241 1426 aa24.43■■□□□ 1.5
RER1-206ENST00000462129 RTL1A6NKG5 1358 aa24.42■■□□□ 1.5
RER1-206ENST00000462129 USHBP1Q8N6Y0 703 aa24.42■■□□□ 1.5
RER1-206ENST00000462129 C5P01031 1676 aa24.41■■□□□ 1.5
RER1-206ENST00000462129 IFFO2Q5TF58 517 aa24.41■■□□□ 1.5
RER1-206ENST00000462129 PER1O15534 1290 aaPredicted RBP24.4■■□□□ 1.5
RER1-206ENST00000462129 CNGB1Q14028 1251 aaPredicted RBP24.4■■□□□ 1.5
RER1-206ENST00000462129 RRS1Q15050 365 aaKnown RBP24.4■■□□□ 1.5
RER1-206ENST00000462129 NBPF6Q5VWK0 638 aa24.4■■□□□ 1.5
RER1-206ENST00000462129 NBPF4Q96M43 638 aa24.4■■□□□ 1.5
RER1-206ENST00000462129 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
RER1-206ENST00000462129 SMG6Q86US8 1419 aaKnown RBP24.39■■□□□ 1.5
RER1-206ENST00000462129 CC2D1BQ5T0F9 858 aaKnown RBP24.39■■□□□ 1.49
RER1-206ENST00000462129 MORC1Q86VD1 984 aa24.39■■□□□ 1.49
RER1-206ENST00000462129 RAPGEF4Q8WZA2 1011 aa24.39■■□□□ 1.49
RER1-206ENST00000462129 AMER1Q5JTC6 1135 aaPredicted RBP24.37■■□□□ 1.49
RER1-206ENST00000462129 NPC1L1Q9UHC9 1359 aa24.37■■□□□ 1.49
RER1-206ENST00000462129 CD2APQ9Y5K6 639 aa24.36■■□□□ 1.49
RER1-206ENST00000462129 PALLDQ8WX93 1383 aa24.36■■□□□ 1.49
RER1-206ENST00000462129 TATP17735 454 aaPredicted RBP24.35■■□□□ 1.49
RER1-206ENST00000462129 GPBP1L1Q9HC44 474 aaPredicted RBP24.35■■□□□ 1.49
RER1-206ENST00000462129 PCDH11XQ9BZA7 1347 aa24.35■■□□□ 1.49
RER1-206ENST00000462129 PCDH11YQ9BZA8 1340 aa24.35■■□□□ 1.49
RER1-206ENST00000462129 CEP350Q5VT06 3117 aa24.34■■□□□ 1.49
RER1-206ENST00000462129 FLAD1Q8NFF5 587 aa24.34■■□□□ 1.49
RER1-206ENST00000462129 TAF1LQ8IZX4 1826 aa24.33■■□□□ 1.48
RER1-206ENST00000462129 TNNT2P45379 298 aaPredicted RBP24.32■■□□□ 1.48
RER1-206ENST00000462129 MPRIPQ6WCQ1 1025 aa24.32■■□□□ 1.48
RER1-206ENST00000462129 ZNF526Q8TF50 670 aaPredicted RBP24.32■■□□□ 1.48
RER1-206ENST00000462129 ADCY9O60503 1353 aa24.31■■□□□ 1.48
RER1-206ENST00000462129 AK7Q96M32 723 aa24.31■■□□□ 1.48
RER1-206ENST00000462129 C4BP0C0L5 1744 aa24.3■■□□□ 1.48
RER1-206ENST00000462129 HMGB2P26583 209 aaKnown RBP24.3■■□□□ 1.48
RER1-206ENST00000462129 PHF14O94880 888 aa24.29■■□□□ 1.48
RER1-206ENST00000462129 WWC3Q9ULE0 1092 aa24.29■■□□□ 1.48
RER1-206ENST00000462129 TOGARAM1Q9Y4F4 1720 aa24.29■■□□□ 1.48
RER1-206ENST00000462129 INSRP06213 1382 aa24.28■■□□□ 1.48
RER1-206ENST00000462129 HSP90AB2PQ58FF8 381 aa24.27■■□□□ 1.48
RER1-206ENST00000462129 AMIGO3Q86WK7 504 aa24.27■■□□□ 1.48
RER1-206ENST00000462129 IGSF1Q8N6C5 1336 aa24.27■■□□□ 1.48
RER1-206ENST00000462129 CYP27B1O15528 508 aa24.26■■□□□ 1.47
RER1-206ENST00000462129 SMARCC1Q92922 1105 aaPredicted RBP24.26■■□□□ 1.47
RER1-206ENST00000462129 FLT4P35916 1363 aa24.26■■□□□ 1.47
RER1-206ENST00000462129 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
RER1-206ENST00000462129 HSPA6P17066 643 aa24.25■■□□□ 1.47
RER1-206ENST00000462129 SMIM5Q71RC9 77 aa24.25■■□□□ 1.47
RER1-206ENST00000462129 ITGB4P16144 1822 aa24.24■■□□□ 1.47
RER1-206ENST00000462129 UBR3Q6ZT12 1888 aa24.24■■□□□ 1.47
RER1-206ENST00000462129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.23■■□□□ 1.47
RER1-206ENST00000462129 ANP32CO43423 234 aa24.23■■□□□ 1.47
RER1-206ENST00000462129 RALBP1Q15311 655 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms