RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ZNF853P0CG23 659 aa15.84■□□□□ 0.13
COL4A6-204ENST00000461897 IFT57Q9NWB7 429 aa15.84■□□□□ 0.13
COL4A6-204ENST00000461897 RGPD5Q99666 1765 aa15.83■□□□□ 0.12
COL4A6-204ENST00000461897 MTHFSDQ2M296 383 aaKnown RBP15.83■□□□□ 0.12
COL4A6-204ENST00000461897 SLAIN2Q9P270 581 aa15.83■□□□□ 0.12
COL4A6-204ENST00000461897 DAXXQ9UER7 740 aaPredicted RBP15.83■□□□□ 0.12
COL4A6-204ENST00000461897 CAMTA1Q9Y6Y1 1673 aa15.83■□□□□ 0.12
COL4A6-204ENST00000461897 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.12
COL4A6-204ENST00000461897 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
COL4A6-204ENST00000461897 GNAI1P63096 354 aa15.82■□□□□ 0.12
COL4A6-204ENST00000461897 USHBP1Q8N6Y0 703 aa15.82■□□□□ 0.12
COL4A6-204ENST00000461897 PANK1Q8TE04 598 aa15.82■□□□□ 0.12
COL4A6-204ENST00000461897 NBPF6Q5VWK0 638 aa15.81■□□□□ 0.12
COL4A6-204ENST00000461897 NBPF4Q96M43 638 aa15.81■□□□□ 0.12
COL4A6-204ENST00000461897 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
COL4A6-204ENST00000461897 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
COL4A6-204ENST00000461897 COG6Q9Y2V7 657 aa15.81■□□□□ 0.12
COL4A6-204ENST00000461897 NCAPD2Q15021 1401 aa15.81■□□□□ 0.12
COL4A6-204ENST00000461897 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
COL4A6-204ENST00000461897 COL18A1P39060 1754 aa15.8■□□□□ 0.12
COL4A6-204ENST00000461897 NHSL1Q5SYE7 1610 aa15.8■□□□□ 0.12
COL4A6-204ENST00000461897 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
COL4A6-204ENST00000461897 MCM10Q7L590 875 aa15.8■□□□□ 0.12
COL4A6-204ENST00000461897 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
COL4A6-204ENST00000461897 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
COL4A6-204ENST00000461897 GSE1Q14687 1217 aa15.79■□□□□ 0.12
COL4A6-204ENST00000461897 GAS2L2Q8NHY3 880 aa15.79■□□□□ 0.12
COL4A6-204ENST00000461897 LRRC59Q96AG4 307 aaKnown RBP15.79■□□□□ 0.12
COL4A6-204ENST00000461897 SOS2Q07890 1332 aaPredicted RBP15.79■□□□□ 0.12
COL4A6-204ENST00000461897 CRB1P82279 1406 aa15.79■□□□□ 0.12
COL4A6-204ENST00000461897 LMO7Q8WWI1 1683 aa15.79■□□□□ 0.12
COL4A6-204ENST00000461897 ZC3H6P61129 1189 aaKnown RBP15.78■□□□□ 0.12
COL4A6-204ENST00000461897 FRAT1Q92837 279 aaPredicted RBP15.78■□□□□ 0.12
COL4A6-204ENST00000461897 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
COL4A6-204ENST00000461897 ANKRD24Q8TF21 1146 aa15.78■□□□□ 0.12
COL4A6-204ENST00000461897 SSH1Q8WYL5 1049 aa15.78■□□□□ 0.12
COL4A6-204ENST00000461897 ABCC6O95255 1503 aa15.77■□□□□ 0.11
COL4A6-204ENST00000461897 ERBB3P21860 1342 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 RLBP1P12271 317 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 TSPYL6Q8N831 410 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 TNNQ9UQP3 1299 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 PCDHB15Q9Y5E8 787 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 ABCA3Q99758 1704 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 LTBP4Q8N2S1 1624 aa15.76■□□□□ 0.11
COL4A6-204ENST00000461897 CHL1O00533 1208 aa15.75■□□□□ 0.11
COL4A6-204ENST00000461897 CPDO75976 1380 aa15.74■□□□□ 0.11
COL4A6-204ENST00000461897 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
COL4A6-204ENST00000461897 VAMP4O75379 141 aa15.74■□□□□ 0.11
COL4A6-204ENST00000461897 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
COL4A6-204ENST00000461897 FAM208AQ9UK61 1670 aaKnown RBP15.74■□□□□ 0.11
COL4A6-204ENST00000461897 GNAT3A8MTJ3 354 aa15.74■□□□□ 0.11
COL4A6-204ENST00000461897 HTATSF1O43719 755 aaKnown RBP15.74■□□□□ 0.11
COL4A6-204ENST00000461897 ALDH1L2Q3SY69 923 aa15.74■□□□□ 0.11
COL4A6-204ENST00000461897 C8orf58Q8NAV2 365 aa15.74■□□□□ 0.11
COL4A6-204ENST00000461897 ZNF428Q96B54 188 aa15.74■□□□□ 0.11
COL4A6-204ENST00000461897 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
COL4A6-204ENST00000461897 KIAA0232Q92628 1395 aa15.73■□□□□ 0.11
COL4A6-204ENST00000461897 MVPQ14764 893 aaKnown RBP15.73■□□□□ 0.11
COL4A6-204ENST00000461897 ZKSCAN2Q63HK3 967 aa15.72■□□□□ 0.11
COL4A6-204ENST00000461897 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
COL4A6-204ENST00000461897 SEC24BO95487 1268 aa15.71■□□□□ 0.11
COL4A6-204ENST00000461897 BECN1Q14457 450 aa15.71■□□□□ 0.11
COL4A6-204ENST00000461897 TWISTNBQ3B726 338 aaPredicted RBP15.71■□□□□ 0.11
COL4A6-204ENST00000461897 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
COL4A6-204ENST00000461897 TRIM27P14373 513 aa15.71■□□□□ 0.11
COL4A6-204ENST00000461897 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
COL4A6-204ENST00000461897 ROBO1Q9Y6N7 1651 aa15.7■□□□□ 0.1
COL4A6-204ENST00000461897 KIF16BQ96L93 1317 aa15.7■□□□□ 0.1
COL4A6-204ENST00000461897 BRPF1P55201 1214 aaPredicted RBP15.7■□□□□ 0.1
COL4A6-204ENST00000461897 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
COL4A6-204ENST00000461897 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
COL4A6-204ENST00000461897 TBC1D32Q96NH3 1257 aa15.7■□□□□ 0.1
COL4A6-204ENST00000461897 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
COL4A6-204ENST00000461897 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
COL4A6-204ENST00000461897 FRAT2O75474 233 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-204ENST00000461897 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
COL4A6-204ENST00000461897 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
COL4A6-204ENST00000461897 HDAC1Q13547 482 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-204ENST00000461897 DZIP1LQ8IYY4 767 aaKnown RBP15.68■□□□□ 0.1
COL4A6-204ENST00000461897 MRPL50Q8N5N7 158 aaKnown RBP15.68■□□□□ 0.1
COL4A6-204ENST00000461897 IL27Q8NEV9 243 aa15.68■□□□□ 0.1
COL4A6-204ENST00000461897 TSPYL4Q9UJ04 414 aa15.67■□□□□ 0.1
COL4A6-204ENST00000461897 PLEKHO1Q53GL0 409 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-204ENST00000461897 FTSJ3Q8IY81 847 aaKnown RBP15.67■□□□□ 0.1
COL4A6-204ENST00000461897 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
COL4A6-204ENST00000461897 AHDC1Q5TGY3 1603 aaPredicted RBP15.66■□□□□ 0.1
COL4A6-204ENST00000461897 AMOTQ4VCS5 1084 aa15.66■□□□□ 0.1
COL4A6-204ENST00000461897 ZNF530Q6P9A1 599 aaPredicted RBP15.66■□□□□ 0.1
COL4A6-204ENST00000461897 ANTXR1Q9H6X2 564 aa15.66■□□□□ 0.1
COL4A6-204ENST00000461897 NLRP2Q9NX02 1062 aa15.66■□□□□ 0.1
COL4A6-204ENST00000461897 MEGF6O75095 1541 aa15.66■□□□□ 0.1
COL4A6-204ENST00000461897 AKAP4Q5JQC9 854 aa15.65■□□□□ 0.1
COL4A6-204ENST00000461897 ADAMTS7Q9UKP4 1686 aa15.65■□□□□ 0.1
COL4A6-204ENST00000461897 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
COL4A6-204ENST00000461897 PRDM11Q9NQV5 511 aa15.65■□□□□ 0.1
COL4A6-204ENST00000461897 DDX19BQ9UMR2 479 aa15.65■□□□□ 0.1
COL4A6-204ENST00000461897 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
COL4A6-204ENST00000461897 LGR6Q9HBX8 967 aa15.64■□□□□ 0.09
COL4A6-204ENST00000461897 COL5A2P05997 1499 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms