RNA–Protein interactions for RNA: ENST00000461689.5

NEK4-203, Transcript of NIMA related kinase 4, humanhuman

TSL 5

Gene NEK4, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-203ENST00000461689 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
NEK4-203ENST00000461689 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
NEK4-203ENST00000461689 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
NEK4-203ENST00000461689 PDZRN3Q9UPQ7 1066 aa17.11■□□□□ 0.33
NEK4-203ENST00000461689 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
NEK4-203ENST00000461689 ZBTB7BO15156 539 aaPredicted RBP17.1■□□□□ 0.33
NEK4-203ENST00000461689 GCP02774 474 aa17.1■□□□□ 0.33
NEK4-203ENST00000461689 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
NEK4-203ENST00000461689 ATF3P18847 181 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 NFAT5O94916 1531 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 ABCC4O15439 1325 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 KRT24Q2M2I5 525 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 LTN1O94822 1766 aa17.09■□□□□ 0.33
NEK4-203ENST00000461689 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.33
NEK4-203ENST00000461689 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
NEK4-203ENST00000461689 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
NEK4-203ENST00000461689 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
NEK4-203ENST00000461689 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
NEK4-203ENST00000461689 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
NEK4-203ENST00000461689 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
NEK4-203ENST00000461689 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
NEK4-203ENST00000461689 NCOA3Q9Y6Q9 1424 aa17.06■□□□□ 0.32
NEK4-203ENST00000461689 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
NEK4-203ENST00000461689 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
NEK4-203ENST00000461689 IL17REQ8NFR9 667 aa17.05■□□□□ 0.32
NEK4-203ENST00000461689 BABAM1Q9NWV8 329 aa17.05■□□□□ 0.32
NEK4-203ENST00000461689 USP19O94966 1318 aa17.04■□□□□ 0.32
NEK4-203ENST00000461689 PTPRCP08575 1304 aa17.04■□□□□ 0.32
NEK4-203ENST00000461689 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
NEK4-203ENST00000461689 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
NEK4-203ENST00000461689 TAF7Q15545 349 aaPredicted RBP17.03■□□□□ 0.32
NEK4-203ENST00000461689 PHRF1Q9P1Y6 1649 aaKnown RBP17.03■□□□□ 0.32
NEK4-203ENST00000461689 HSPA2P54652 639 aa17.03■□□□□ 0.32
NEK4-203ENST00000461689 INTS3Q68E01 1043 aaKnown RBP17.03■□□□□ 0.32
NEK4-203ENST00000461689 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
NEK4-203ENST00000461689 SLIT3O75094 1523 aa17.02■□□□□ 0.32
NEK4-203ENST00000461689 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
NEK4-203ENST00000461689 DCCP43146 1447 aa17.02■□□□□ 0.32
NEK4-203ENST00000461689 DDRGK1Q96HY6 314 aa17.01■□□□□ 0.31
NEK4-203ENST00000461689 MSH6P52701 1360 aa17.01■□□□□ 0.31
NEK4-203ENST00000461689 MST1RQ04912 1400 aa17.01■□□□□ 0.31
NEK4-203ENST00000461689 TRPM3Q9HCF6 1732 aaPredicted RBP17■□□□□ 0.31
NEK4-203ENST00000461689 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
NEK4-203ENST00000461689 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
NEK4-203ENST00000461689 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
NEK4-203ENST00000461689 NUCB1Q02818 461 aa16.99■□□□□ 0.31
NEK4-203ENST00000461689 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
NEK4-203ENST00000461689 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
NEK4-203ENST00000461689 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
NEK4-203ENST00000461689 STK31Q9BXU1 1019 aa16.99■□□□□ 0.31
NEK4-203ENST00000461689 C1orf115Q9H7X2 142 aa16.99■□□□□ 0.31
NEK4-203ENST00000461689 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
NEK4-203ENST00000461689 STRCP1A6NGW2 1772 aa16.98■□□□□ 0.31
NEK4-203ENST00000461689 AXIN2Q9Y2T1 843 aa16.98■□□□□ 0.31
NEK4-203ENST00000461689 AKAP4Q5JQC9 854 aa16.97■□□□□ 0.31
NEK4-203ENST00000461689 LRRC37A3O60309 1634 aa16.97■□□□□ 0.31
NEK4-203ENST00000461689 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
NEK4-203ENST00000461689 NPHP3Q7Z494 1330 aa16.97■□□□□ 0.31
NEK4-203ENST00000461689 RGS12O14924 1447 aa16.96■□□□□ 0.31
NEK4-203ENST00000461689 CHD1LQ86WJ1 897 aa16.96■□□□□ 0.31
NEK4-203ENST00000461689 SIRT2Q8IXJ6 389 aa16.96■□□□□ 0.31
NEK4-203ENST00000461689 ZC3H6P61129 1189 aaKnown RBP16.95■□□□□ 0.3
NEK4-203ENST00000461689 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
NEK4-203ENST00000461689 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
NEK4-203ENST00000461689 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
NEK4-203ENST00000461689 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
NEK4-203ENST00000461689 G2E3Q7L622 706 aa16.94■□□□□ 0.3
NEK4-203ENST00000461689 NCAPD2Q15021 1401 aa16.94■□□□□ 0.3
NEK4-203ENST00000461689 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
NEK4-203ENST00000461689 C1orf141Q5JVX7 400 aa16.94■□□□□ 0.3
NEK4-203ENST00000461689 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
NEK4-203ENST00000461689 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
NEK4-203ENST00000461689 ALS2Q96Q42 1657 aa16.93■□□□□ 0.3
NEK4-203ENST00000461689 SEC24BO95487 1268 aa16.93■□□□□ 0.3
NEK4-203ENST00000461689 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
NEK4-203ENST00000461689 TEFQ10587 303 aa16.93■□□□□ 0.3
NEK4-203ENST00000461689 RPAP2Q8IXW5 612 aaPredicted RBP16.93■□□□□ 0.3
NEK4-203ENST00000461689 CHMP4AQ9BY43 222 aa16.93■□□□□ 0.3
NEK4-203ENST00000461689 KDM4FA0A1W2PPD8 638 aa16.92■□□□□ 0.3
NEK4-203ENST00000461689 UPF2Q9HAU5 1272 aaKnown RBP16.92■□□□□ 0.3
NEK4-203ENST00000461689 ERBB3P21860 1342 aa16.92■□□□□ 0.3
NEK4-203ENST00000461689 FLIIQ13045 1269 aa16.91■□□□□ 0.3
NEK4-203ENST00000461689 SLC4A10Q6U841 1118 aa16.91■□□□□ 0.3
NEK4-203ENST00000461689 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
NEK4-203ENST00000461689 MYT1Q01538 1121 aa16.91■□□□□ 0.3
NEK4-203ENST00000461689 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
NEK4-203ENST00000461689 F6X3S4 739 aa16.9■□□□□ 0.3
NEK4-203ENST00000461689 ANKRD44Q8N8A2 993 aa16.9■□□□□ 0.3
NEK4-203ENST00000461689 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
NEK4-203ENST00000461689 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
NEK4-203ENST00000461689 MED1Q15648 1581 aaPredicted RBP16.9■□□□□ 0.3
NEK4-203ENST00000461689 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
NEK4-203ENST00000461689 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
NEK4-203ENST00000461689 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
NEK4-203ENST00000461689 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
NEK4-203ENST00000461689 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms