RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 NOL8Q76FK4 1167 aaKnown RBP4.26□□□□□ -1.73
RBM39-221ENST00000461283 CDCA7LQ96GN5 454 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 GPATCH3Q96I76 525 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 MKNK1Q9BUB5 465 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 NOP58Q9Y2X3 529 aaKnown RBP4.26□□□□□ -1.73
RBM39-221ENST00000461283 UHRF1BP1Q6BDS2 1440 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 FRMPD1Q5SYB0 1578 aa4.26□□□□□ -1.73
RBM39-221ENST00000461283 PPP1R3GB7ZBB8 358 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 RAB11FIP3O75154 756 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 ATP2B4P23634 1241 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 NCOA4Q13772 614 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 PRIMPOLQ96LW4 560 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 ZBTB3Q9H5J0 574 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 MKRN1Q9UHC7 482 aaKnown RBP4.25□□□□□ -1.73
RBM39-221ENST00000461283 RAPGEF6Q8TEU7 1601 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 NPATQ14207 1427 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 CEP162Q5TB80 1403 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 PLA2R1Q13018 1463 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L15C9J2P7 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L10C9JJH3 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L13C9JLJ4 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L12C9JPN9 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L11C9JVI0 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L21D6R901 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L18D6R9N7 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L22D6RA61 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L17D6RBQ6 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L19D6RCP7 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L20D6RJB6 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 TOM1O60784 492 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 FBXO45P0C2W1 286 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 FDX1P10109 184 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 MAPK1P28482 360 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 HDLBPQ00341 1268 aaKnown RBP4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L24Q0WX57 530 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 ZNF326Q5BKZ1 582 aaKnown RBP4.25□□□□□ -1.73
RBM39-221ENST00000461283 FBXO33Q7Z6M2 555 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 C9orf84Q5VXU9 1444 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 CPS1P31327 1500 aa4.25□□□□□ -1.73
RBM39-221ENST00000461283 USP17L5A8MUK1 530 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 GTF2F1P35269 517 aaKnown RBP eCLIP4.24□□□□□ -1.73
RBM39-221ENST00000461283 TSGA10IPQ3SY00 556 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 NUDT18Q6ZVK8 323 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 ANKRD13AQ8IZ07 590 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 SLC39A7Q92504 469 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 TANGO6Q9C0B7 1094 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 LNPKQ9C0E8 428 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 SEPT3Q9UH03 358 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 C6orf229H3BNL8 230 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 RBM46Q8TBY0 533 aaKnown RBP4.24□□□□□ -1.73
RBM39-221ENST00000461283 MICAL1Q8TDZ2 1067 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 C8orf37Q96NL8 207 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 NHSL1Q5SYE7 1610 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 ATP10AO60312 1499 aa4.24□□□□□ -1.73
RBM39-221ENST00000461283 HOXA2O43364 376 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 PTK7Q13308 1070 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 LDLRAD1Q5T700 205 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 C3orf67Q6ZVT6 689 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 PTCD2Q8WV60 388 aaKnown RBP4.23□□□□□ -1.73
RBM39-221ENST00000461283 ADAM33Q9BZ11 813 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 DPYDQ12882 1025 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 LHX8Q68G74 356 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 TYW1BQ6NUM6 668 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 NT5DC4Q86YG4 428 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 PMFBP1Q8TBY8 1022 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 PIK3R5Q8WYR1 880 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 PIF1Q9H611 641 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 SBNO2Q9Y2G9 1366 aa4.23□□□□□ -1.73
RBM39-221ENST00000461283 ZNF142P52746 1687 aaPredicted RBP4.23□□□□□ -1.73
RBM39-221ENST00000461283 PTPRKQ15262 1439 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 C11orf95C9JLR9 678 aaPredicted RBP4.22□□□□□ -1.73
RBM39-221ENST00000461283 C1QTNF8P60827 252 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 CLDN10P78369 228 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 B4GALNT3Q6L9W6 998 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 POTEAQ6S8J7 498 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 ZNF454Q8N9F8 522 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 HELBQ8NG08 1087 aaPredicted RBP4.22□□□□□ -1.73
RBM39-221ENST00000461283 KHSRPQ92945 711 aaKnown RBP eCLIP4.22□□□□□ -1.732e-9■■□□□ 13.8
RBM39-221ENST00000461283 EYA1Q99502 592 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 EPAS1Q99814 870 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 CDCA7Q9BWT1 371 aaPredicted RBP4.22□□□□□ -1.73
RBM39-221ENST00000461283 KLHL42Q9P2K6 505 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 TSKSQ9UJT2 592 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 KIAA1024Q9UPX6 916 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 WASHC2AQ641Q2 1341 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 DHX57Q6P158 1386 aaKnown RBP4.22□□□□□ -1.73
RBM39-221ENST00000461283 COL9A1P20849 921 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 PRSS12P56730 875 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 RAD51AP2Q09MP3 1159 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 MTMR2Q13614 643 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 CCDC144BQ3MJ40 725 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 TTC13Q8NBP0 860 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 FAM200AQ8TCP9 573 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 PURBQ96QR8 312 aaKnown RBP4.22□□□□□ -1.73
RBM39-221ENST00000461283 SETDB2Q96T68 719 aa4.22□□□□□ -1.73
RBM39-221ENST00000461283 SETBP1Q9Y6X0 1596 aa4.21□□□□□ -1.73
RBM39-221ENST00000461283 DNAJA1P31689 397 aaKnown RBP4.21□□□□□ -1.74
RBM39-221ENST00000461283 GLYCTKQ8IVS8 523 aa4.21□□□□□ -1.74
RBM39-221ENST00000461283 NCOA1Q15788 1441 aa4.21□□□□□ -1.74
RBM39-221ENST00000461283 TRAPPC8Q9Y2L5 1435 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms