RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 USHBP1Q8N6Y0 703 aa21.02■□□□□ 0.96
COL16A1-206ENST00000461217 SHANK3Q9BYB0 1731 aa21.01■□□□□ 0.95
COL16A1-206ENST00000461217 PRIM1P49642 420 aaKnown RBP21.01■□□□□ 0.95
COL16A1-206ENST00000461217 ZNF827Q17R98 1081 aa21.01■□□□□ 0.95
COL16A1-206ENST00000461217 NBPF6Q5VWK0 638 aa21.01■□□□□ 0.95
COL16A1-206ENST00000461217 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
COL16A1-206ENST00000461217 NBPF4Q96M43 638 aa21.01■□□□□ 0.95
COL16A1-206ENST00000461217 LRRC4BQ9NT99 713 aa21.01■□□□□ 0.95
COL16A1-206ENST00000461217 FLT4P35916 1363 aa20.99■□□□□ 0.95
COL16A1-206ENST00000461217 NSD3Q9BZ95 1437 aa20.99■□□□□ 0.95
COL16A1-206ENST00000461217 SLC27A3Q5K4L6 730 aa20.99■□□□□ 0.95
COL16A1-206ENST00000461217 ZEB1P37275 1124 aaPredicted RBP20.98■□□□□ 0.95
COL16A1-206ENST00000461217 FHDC1Q9C0D6 1143 aaPredicted RBP20.98■□□□□ 0.95
COL16A1-206ENST00000461217 TIMELESSQ9UNS1 1208 aa20.98■□□□□ 0.95
COL16A1-206ENST00000461217 INSRP06213 1382 aa20.97■□□□□ 0.95
COL16A1-206ENST00000461217 TATP17735 454 aaPredicted RBP20.97■□□□□ 0.95
COL16A1-206ENST00000461217 HSP90AB2PQ58FF8 381 aa20.97■□□□□ 0.95
COL16A1-206ENST00000461217 CGNL1Q0VF96 1302 aa20.97■□□□□ 0.95
COL16A1-206ENST00000461217 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
COL16A1-206ENST00000461217 KIF24Q5T7B8 1368 aa20.96■□□□□ 0.95
COL16A1-206ENST00000461217 KCNQ4P56696 695 aa20.95■□□□□ 0.94
COL16A1-206ENST00000461217 ARXQ96QS3 562 aa20.95■□□□□ 0.94
COL16A1-206ENST00000461217 NSD2O96028 1365 aa20.95■□□□□ 0.94
COL16A1-206ENST00000461217 PPM1GO15355 546 aaPredicted RBP20.94■□□□□ 0.94
COL16A1-206ENST00000461217 AKT1S1Q96B36 256 aa20.94■□□□□ 0.94
COL16A1-206ENST00000461217 SGIP1Q9BQI5 828 aa20.94■□□□□ 0.94
COL16A1-206ENST00000461217 SYT17Q9BSW7 474 aa20.94■□□□□ 0.94
COL16A1-206ENST00000461217 CARD14Q9BXL6 1004 aa20.94■□□□□ 0.94
COL16A1-206ENST00000461217 TFCP2L1Q9NZI6 479 aa20.94■□□□□ 0.94
COL16A1-206ENST00000461217 LY75O60449 1722 aa20.93■□□□□ 0.94
COL16A1-206ENST00000461217 CCNL1Q9UK58 526 aaPredicted RBP20.93■□□□□ 0.94
COL16A1-206ENST00000461217 EMILIN1Q9Y6C2 1016 aa20.93■□□□□ 0.94
COL16A1-206ENST00000461217 PCDH11XQ9BZA7 1347 aa20.93■□□□□ 0.94
COL16A1-206ENST00000461217 PCDH11YQ9BZA8 1340 aa20.93■□□□□ 0.94
COL16A1-206ENST00000461217 QSER1Q2KHR3 1735 aa20.92■□□□□ 0.94
COL16A1-206ENST00000461217 PNPLA7Q6ZV29 1317 aa20.91■□□□□ 0.94
COL16A1-206ENST00000461217 KLHL34Q8N239 644 aa20.91■□□□□ 0.94
COL16A1-206ENST00000461217 POLD1P28340 1107 aa20.9■□□□□ 0.94
COL16A1-206ENST00000461217 SLC16A10Q8TF71 515 aa20.9■□□□□ 0.94
COL16A1-206ENST00000461217 TUBGCP6Q96RT7 1819 aa20.9■□□□□ 0.94
COL16A1-206ENST00000461217 MSH5O43196 834 aa20.88■□□□□ 0.93
COL16A1-206ENST00000461217 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
COL16A1-206ENST00000461217 MPRIPQ6WCQ1 1025 aa20.86■□□□□ 0.93
COL16A1-206ENST00000461217 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
COL16A1-206ENST00000461217 PKD1L3Q7Z443 1732 aa20.85■□□□□ 0.93
COL16A1-206ENST00000461217 CYP27B1O15528 508 aa20.84■□□□□ 0.93
COL16A1-206ENST00000461217 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
COL16A1-206ENST00000461217 C5P01031 1676 aa20.83■□□□□ 0.93
COL16A1-206ENST00000461217 WASHC2AQ641Q2 1341 aa20.83■□□□□ 0.93
COL16A1-206ENST00000461217 SPG7Q9UQ90 795 aa20.83■□□□□ 0.93
COL16A1-206ENST00000461217 TOGARAM1Q9Y4F4 1720 aa20.83■□□□□ 0.92
COL16A1-206ENST00000461217 TNNT2P45379 298 aaPredicted RBP20.82■□□□□ 0.92
COL16A1-206ENST00000461217 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
COL16A1-206ENST00000461217 MAP2P11137 1827 aaKnown RBP20.81■□□□□ 0.92
COL16A1-206ENST00000461217 NCAPD2Q15021 1401 aa20.81■□□□□ 0.92
COL16A1-206ENST00000461217 COL24A1Q17RW2 1714 aa20.81■□□□□ 0.92
COL16A1-206ENST00000461217 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
COL16A1-206ENST00000461217 GPR162Q16538 588 aa20.8■□□□□ 0.92
COL16A1-206ENST00000461217 PELP1Q8IZL8 1130 aaKnown RBP20.8■□□□□ 0.92
COL16A1-206ENST00000461217 ITGB4P16144 1822 aa20.79■□□□□ 0.92
COL16A1-206ENST00000461217 HSPA5P11021 654 aaKnown RBP20.79■□□□□ 0.92
COL16A1-206ENST00000461217 COL23A1Q86Y22 540 aaPredicted RBP20.79■□□□□ 0.92
COL16A1-206ENST00000461217 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
COL16A1-206ENST00000461217 EYA1Q99502 592 aa20.79■□□□□ 0.92
COL16A1-206ENST00000461217 POLKQ9UBT6 870 aa20.79■□□□□ 0.92
COL16A1-206ENST00000461217 MSL1Q68DK7 614 aa20.77■□□□□ 0.92
COL16A1-206ENST00000461217 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
COL16A1-206ENST00000461217 AK7Q96M32 723 aa20.76■□□□□ 0.91
COL16A1-206ENST00000461217 C4BP0C0L5 1744 aa20.75■□□□□ 0.91
COL16A1-206ENST00000461217 EIF4A2Q14240 407 aaKnown RBP20.75■□□□□ 0.91
COL16A1-206ENST00000461217 FLAD1Q8NFF5 587 aa20.75■□□□□ 0.91
COL16A1-206ENST00000461217 PIGBQ92521 554 aa20.75■□□□□ 0.91
COL16A1-206ENST00000461217 PANK3Q9H999 370 aa20.75■□□□□ 0.91
COL16A1-206ENST00000461217 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
COL16A1-206ENST00000461217 NKX1-1Q15270 411 aaPredicted RBP20.74■□□□□ 0.91
COL16A1-206ENST00000461217 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
COL16A1-206ENST00000461217 ZNF784Q8NCA9 323 aaPredicted RBP20.74■□□□□ 0.91
COL16A1-206ENST00000461217 NLGN2Q8NFZ4 835 aa20.74■□□□□ 0.91
COL16A1-206ENST00000461217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL16A1-206ENST00000461217 CHD4Q14839 1912 aa20.73■□□□□ 0.91
COL16A1-206ENST00000461217 PHKG2P15735 406 aa20.72■□□□□ 0.91
COL16A1-206ENST00000461217 PHF14O94880 888 aa20.71■□□□□ 0.91
COL16A1-206ENST00000461217 LOC102724428A0A0B4J2F2 783 aa20.69■□□□□ 0.9
COL16A1-206ENST00000461217 SIK1P57059 783 aa20.69■□□□□ 0.9
COL16A1-206ENST00000461217 IGSF1Q8N6C5 1336 aa20.69■□□□□ 0.9
COL16A1-206ENST00000461217 MORC1Q86VD1 984 aa20.68■□□□□ 0.9
COL16A1-206ENST00000461217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.67■□□□□ 0.9
COL16A1-206ENST00000461217 ASAP1Q9ULH1 1129 aa20.67■□□□□ 0.9
COL16A1-206ENST00000461217 PLEKHG2Q9H7P9 1386 aa20.67■□□□□ 0.9
COL16A1-206ENST00000461217 UBR3Q6ZT12 1888 aa20.67■□□□□ 0.9
COL16A1-206ENST00000461217 ATP6V1AP38606 617 aa20.66■□□□□ 0.9
COL16A1-206ENST00000461217 LINC00116Q8NCU8 138 aa20.66■□□□□ 0.9
COL16A1-206ENST00000461217 SMIM5Q71RC9 77 aa20.65■□□□□ 0.9
COL16A1-206ENST00000461217 AMIGO3Q86WK7 504 aa20.65■□□□□ 0.9
COL16A1-206ENST00000461217 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
COL16A1-206ENST00000461217 GNPATO15228 680 aa20.64■□□□□ 0.89
COL16A1-206ENST00000461217 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
COL16A1-206ENST00000461217 SSFA2P28290 1259 aa20.64■□□□□ 0.89
COL16A1-206ENST00000461217 PLEKHO1Q53GL0 409 aaPredicted RBP20.64■□□□□ 0.89
COL16A1-206ENST00000461217 GRIN3BO60391 1043 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms