RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ZCRB1Q8TBF4 217 aaKnown RBP30.72■■■□□ 2.51
TRAF4-207ENST00000461195 RGPD3A6NKT7 1758 aaPredicted RBP30.71■■■□□ 2.51
TRAF4-207ENST00000461195 RGPD4Q7Z3J3 1758 aa30.71■■■□□ 2.51
TRAF4-207ENST00000461195 NHSQ6T4R5 1651 aa30.71■■■□□ 2.51
TRAF4-207ENST00000461195 SHANK3Q9BYB0 1731 aa30.7■■■□□ 2.51
TRAF4-207ENST00000461195 TATP17735 454 aaPredicted RBP30.7■■■□□ 2.51
TRAF4-207ENST00000461195 PLSCR1O15162 318 aa30.69■■■□□ 2.5
TRAF4-207ENST00000461195 NCAPD2Q15021 1401 aa30.68■■■□□ 2.5
TRAF4-207ENST00000461195 ACSBG1Q96GR2 724 aa30.68■■■□□ 2.5
TRAF4-207ENST00000461195 NUP188Q5SRE5 1749 aa30.67■■■□□ 2.5
TRAF4-207ENST00000461195 KCNQ2O43526 872 aa30.67■■■□□ 2.5
TRAF4-207ENST00000461195 KAT6BQ8WYB5 2073 aa30.67■■■□□ 2.5
TRAF4-207ENST00000461195 EIF4A2Q14240 407 aaKnown RBP30.66■■■□□ 2.5
TRAF4-207ENST00000461195 EYA1Q99502 592 aa30.66■■■□□ 2.5
TRAF4-207ENST00000461195 CC2D1BQ5T0F9 858 aaKnown RBP30.62■■■□□ 2.49
TRAF4-207ENST00000461195 NPC1L1Q9UHC9 1359 aa30.61■■■□□ 2.49
TRAF4-207ENST00000461195 BTAF1O14981 1849 aa30.61■■■□□ 2.49
TRAF4-207ENST00000461195 PKD1L3Q7Z443 1732 aa30.59■■■□□ 2.49
TRAF4-207ENST00000461195 DOT1LQ8TEK3 1739 aa30.59■■■□□ 2.49
TRAF4-207ENST00000461195 PCDH11XQ9BZA7 1347 aa30.59■■■□□ 2.49
TRAF4-207ENST00000461195 PCDH11YQ9BZA8 1340 aa30.59■■■□□ 2.49
TRAF4-207ENST00000461195 NBPF14Q5TI25 921 aa30.59■■■□□ 2.49
TRAF4-207ENST00000461195 IGSF1Q8N6C5 1336 aa30.56■■■□□ 2.48
TRAF4-207ENST00000461195 PROM2Q8N271 834 aa30.55■■■□□ 2.48
TRAF4-207ENST00000461195 SPG7Q9UQ90 795 aa30.54■■■□□ 2.48
TRAF4-207ENST00000461195 PRIM1P49642 420 aaKnown RBP30.53■■■□□ 2.48
TRAF4-207ENST00000461195 TXNRD1Q16881 649 aa30.53■■■□□ 2.48
TRAF4-207ENST00000461195 SYTL4Q96C24 671 aaPredicted RBP30.53■■■□□ 2.48
TRAF4-207ENST00000461195 MTHFSP49914 203 aa30.52■■■□□ 2.48
TRAF4-207ENST00000461195 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.52■■■□□ 2.483e-6■□□□□ 10.9
TRAF4-207ENST00000461195 CYP27B1O15528 508 aa30.51■■■□□ 2.47
TRAF4-207ENST00000461195 CNGB1Q14028 1251 aaPredicted RBP30.51■■■□□ 2.47
TRAF4-207ENST00000461195 PLEKHG2Q9H7P9 1386 aa30.5■■■□□ 2.47
TRAF4-207ENST00000461195 IL13P35225 146 aa30.48■■■□□ 2.47
TRAF4-207ENST00000461195 NKX1-1Q15270 411 aaPredicted RBP30.44■■■□□ 2.46
TRAF4-207ENST00000461195 ANO8Q9HCE9 1232 aaPredicted RBP30.44■■■□□ 2.46
TRAF4-207ENST00000461195 TOGARAM1Q9Y4F4 1720 aa30.43■■■□□ 2.46
TRAF4-207ENST00000461195 SULT6B1Q6IMI4 303 aa30.42■■■□□ 2.46
TRAF4-207ENST00000461195 AEBP1Q8IUX7 1158 aa30.42■■■□□ 2.46
TRAF4-207ENST00000461195 IFNL2Q8IZJ0 200 aa30.42■■■□□ 2.46
TRAF4-207ENST00000461195 ITGB4P16144 1822 aa30.41■■■□□ 2.46
TRAF4-207ENST00000461195 PHKG2P15735 406 aa30.4■■■□□ 2.46
TRAF4-207ENST00000461195 PLEKHO1Q53GL0 409 aaPredicted RBP30.4■■■□□ 2.46
TRAF4-207ENST00000461195 STK32BQ9NY57 414 aa30.4■■■□□ 2.46
TRAF4-207ENST00000461195 KDRP35968 1356 aa30.4■■■□□ 2.46
TRAF4-207ENST00000461195 LY75O60449 1722 aa30.39■■■□□ 2.46
TRAF4-207ENST00000461195 DIAPH1O60610 1272 aaKnown RBP30.39■■■□□ 2.46
TRAF4-207ENST00000461195 SLC27A3Q5K4L6 730 aa30.39■■■□□ 2.46
TRAF4-207ENST00000461195 AMOTQ4VCS5 1084 aa30.38■■■□□ 2.45
TRAF4-207ENST00000461195 PAPPAQ13219 1627 aa30.37■■■□□ 2.45
TRAF4-207ENST00000461195 MPRIPQ6WCQ1 1025 aa30.37■■■□□ 2.45
TRAF4-207ENST00000461195 LRRC4BQ9NT99 713 aa30.37■■■□□ 2.45
TRAF4-207ENST00000461195 SLC15A2Q16348 729 aa30.36■■■□□ 2.45
TRAF4-207ENST00000461195 SPON1Q9HCB6 807 aa30.35■■■□□ 2.45
TRAF4-207ENST00000461195 COL3A1P02461 1466 aaPredicted RBP30.34■■■□□ 2.45
TRAF4-207ENST00000461195 PPP1R1BQ9UD71 204 aaPredicted RBP30.34■■■□□ 2.45
TRAF4-207ENST00000461195 ZNF530Q6P9A1 599 aaPredicted RBP30.33■■■□□ 2.45
TRAF4-207ENST00000461195 HSP90AB1P08238 724 aaKnown RBP30.32■■■□□ 2.44
TRAF4-207ENST00000461195 CASZ1Q86V15 1759 aa30.31■■■□□ 2.44
TRAF4-207ENST00000461195 HMOX1P09601 288 aa30.3■■■□□ 2.44
TRAF4-207ENST00000461195 ZEB1P37275 1124 aaPredicted RBP30.3■■■□□ 2.44
TRAF4-207ENST00000461195 PIGBQ92521 554 aa30.3■■■□□ 2.44
TRAF4-207ENST00000461195 TMOD3Q9NYL9 352 aa30.3■■■□□ 2.44
TRAF4-207ENST00000461195 CCNL1Q9UK58 526 aaPredicted RBP30.3■■■□□ 2.44
TRAF4-207ENST00000461195 PPP2R1AP30153 589 aa30.29■■■□□ 2.44
TRAF4-207ENST00000461195 CFAP53Q96M91 514 aa30.29■■■□□ 2.44
TRAF4-207ENST00000461195 PALLDQ8WX93 1383 aa30.28■■■□□ 2.44
TRAF4-207ENST00000461195 KCNQ4P56696 695 aa30.28■■■□□ 2.44
TRAF4-207ENST00000461195 C1orf141Q5JVX7 400 aa30.28■■■□□ 2.44
TRAF4-207ENST00000461195 SMARCC1Q92922 1105 aaPredicted RBP30.28■■■□□ 2.44
TRAF4-207ENST00000461195 DCAF5Q96JK2 942 aa30.28■■■□□ 2.44
TRAF4-207ENST00000461195 ZNF827Q17R98 1081 aa30.26■■■□□ 2.43
TRAF4-207ENST00000461195 ERVV-2B6SEH9 535 aa30.25■■■□□ 2.43
TRAF4-207ENST00000461195 U2SURPO15042 1029 aaKnown RBP30.25■■■□□ 2.43
TRAF4-207ENST00000461195 AKT1S1Q96B36 256 aa30.25■■■□□ 2.43
TRAF4-207ENST00000461195 PDGFDQ9GZP0 370 aaPredicted RBP30.25■■■□□ 2.43
TRAF4-207ENST00000461195 YY1P25490 414 aa30.24■■■□□ 2.43
TRAF4-207ENST00000461195 KDM6AO15550 1401 aaPredicted RBP30.23■■■□□ 2.43
TRAF4-207ENST00000461195 QSER1Q2KHR3 1735 aa30.22■■■□□ 2.43
TRAF4-207ENST00000461195 HMGB2P26583 209 aaKnown RBP30.22■■■□□ 2.43
TRAF4-207ENST00000461195 C5P01031 1676 aa30.21■■■□□ 2.43
TRAF4-207ENST00000461195 DDX10Q13206 875 aaKnown RBP30.2■■■□□ 2.43
TRAF4-207ENST00000461195 AKAP4Q5JQC9 854 aa30.2■■■□□ 2.43
TRAF4-207ENST00000461195 TAF1LQ8IZX4 1826 aa30.19■■■□□ 2.42
TRAF4-207ENST00000461195 ASAP1Q9ULH1 1129 aa30.19■■■□□ 2.42
TRAF4-207ENST00000461195 NUDCQ9Y266 331 aa30.19■■■□□ 2.42
TRAF4-207ENST00000461195 SCN11AQ9UI33 1791 aa30.18■■■□□ 2.42
TRAF4-207ENST00000461195 TUBGCP6Q96RT7 1819 aa30.18■■■□□ 2.42
TRAF4-207ENST00000461195 DCAF8L1A6NGE4 600 aa30.18■■■□□ 2.42
TRAF4-207ENST00000461195 ZBTB7AO95365 584 aa30.18■■■□□ 2.42
TRAF4-207ENST00000461195 CABP4P57796 275 aa30.18■■■□□ 2.42
TRAF4-207ENST00000461195 TFCP2L1Q9NZI6 479 aa30.18■■■□□ 2.42
TRAF4-207ENST00000461195 MTHFSDQ2M296 383 aaKnown RBP30.16■■■□□ 2.42
TRAF4-207ENST00000461195 ATG3Q9NT62 314 aa30.16■■■□□ 2.42
TRAF4-207ENST00000461195 LOC102724428A0A0B4J2F2 783 aa30.15■■■□□ 2.42
TRAF4-207ENST00000461195 SIK1P57059 783 aa30.15■■■□□ 2.42
TRAF4-207ENST00000461195 MTFR1LQ9H019 292 aa30.14■■■□□ 2.42
TRAF4-207ENST00000461195 VIRMAQ69YN4 1812 aaKnown RBP30.13■■■□□ 2.41
TRAF4-207ENST00000461195 PNPLA7Q6ZV29 1317 aa30.13■■■□□ 2.41
TRAF4-207ENST00000461195 ATF5Q9Y2D1 282 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms