RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
SRRT-206ENST00000460194 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
SRRT-206ENST00000460194 LTV1Q96GA3 475 aaPredicted RBP18.68■□□□□ 0.58
SRRT-206ENST00000460194 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
SRRT-206ENST00000460194 KCNQ4P56696 695 aa18.67■□□□□ 0.58
SRRT-206ENST00000460194 COG3Q96JB2 828 aa18.67■□□□□ 0.58
SRRT-206ENST00000460194 FYB1O15117 783 aa18.66■□□□□ 0.58
SRRT-206ENST00000460194 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
SRRT-206ENST00000460194 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
SRRT-206ENST00000460194 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
SRRT-206ENST00000460194 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
SRRT-206ENST00000460194 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
SRRT-206ENST00000460194 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
SRRT-206ENST00000460194 AMPHP49418 695 aa18.63■□□□□ 0.57
SRRT-206ENST00000460194 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
SRRT-206ENST00000460194 RRS1Q15050 365 aaKnown RBP18.62■□□□□ 0.57
SRRT-206ENST00000460194 C5P01031 1676 aa18.62■□□□□ 0.57
SRRT-206ENST00000460194 ITGB4P16144 1822 aa18.61■□□□□ 0.57
SRRT-206ENST00000460194 TOGARAM1Q9Y4F4 1720 aa18.61■□□□□ 0.57
SRRT-206ENST00000460194 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
SRRT-206ENST00000460194 SYTL4Q96C24 671 aaPredicted RBP18.6■□□□□ 0.57
SRRT-206ENST00000460194 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
SRRT-206ENST00000460194 TFCP2L1Q9NZI6 479 aa18.6■□□□□ 0.57
SRRT-206ENST00000460194 NLGN2Q8NFZ4 835 aa18.59■□□□□ 0.57
SRRT-206ENST00000460194 INSRP06213 1382 aa18.58■□□□□ 0.57
SRRT-206ENST00000460194 PKD1L3Q7Z443 1732 aa18.58■□□□□ 0.57
SRRT-206ENST00000460194 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
SRRT-206ENST00000460194 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
SRRT-206ENST00000460194 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.56
SRRT-206ENST00000460194 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
SRRT-206ENST00000460194 ANKRD26Q9UPS8 1709 aa18.57■□□□□ 0.56
SRRT-206ENST00000460194 HSP90AB2PQ58FF8 381 aa18.57■□□□□ 0.56
SRRT-206ENST00000460194 KIF24Q5T7B8 1368 aa18.56■□□□□ 0.56
SRRT-206ENST00000460194 MAP2P11137 1827 aaKnown RBP18.56■□□□□ 0.56
SRRT-206ENST00000460194 POLD1P28340 1107 aa18.56■□□□□ 0.56
SRRT-206ENST00000460194 USP47Q96K76 1375 aa18.55■□□□□ 0.56
SRRT-206ENST00000460194 C1QTNF8P60827 252 aa18.55■□□□□ 0.56
SRRT-206ENST00000460194 GPR162Q16538 588 aa18.55■□□□□ 0.56
SRRT-206ENST00000460194 CARD14Q9BXL6 1004 aa18.55■□□□□ 0.56
SRRT-206ENST00000460194 UBR3Q6ZT12 1888 aa18.54■□□□□ 0.56
SRRT-206ENST00000460194 CYP27B1O15528 508 aa18.54■□□□□ 0.56
SRRT-206ENST00000460194 TMF1P82094 1093 aa18.54■□□□□ 0.56
SRRT-206ENST00000460194 FLT4P35916 1363 aa18.54■□□□□ 0.56
SRRT-206ENST00000460194 YBX3P16989 372 aaKnown RBP eCLIP18.53■□□□□ 0.56
SRRT-206ENST00000460194 C4BP0C0L5 1744 aa18.52■□□□□ 0.56
SRRT-206ENST00000460194 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.56
SRRT-206ENST00000460194 PCDH11XQ9BZA7 1347 aa18.51■□□□□ 0.55
SRRT-206ENST00000460194 PCDH11YQ9BZA8 1340 aa18.51■□□□□ 0.55
SRRT-206ENST00000460194 SMG6Q86US8 1419 aaKnown RBP18.51■□□□□ 0.55
SRRT-206ENST00000460194 TATP17735 454 aaPredicted RBP18.51■□□□□ 0.55
SRRT-206ENST00000460194 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
SRRT-206ENST00000460194 NKX1-1Q15270 411 aaPredicted RBP18.5■□□□□ 0.55
SRRT-206ENST00000460194 KLHL34Q8N239 644 aa18.5■□□□□ 0.55
SRRT-206ENST00000460194 PALLDQ8WX93 1383 aa18.5■□□□□ 0.55
SRRT-206ENST00000460194 EMILIN1Q9Y6C2 1016 aa18.49■□□□□ 0.55
SRRT-206ENST00000460194 MSL1Q68DK7 614 aa18.47■□□□□ 0.55
SRRT-206ENST00000460194 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
SRRT-206ENST00000460194 PIGBQ92521 554 aa18.46■□□□□ 0.55
SRRT-206ENST00000460194 NSD3Q9BZ95 1437 aa18.46■□□□□ 0.55
SRRT-206ENST00000460194 CEP350Q5VT06 3117 aa18.46■□□□□ 0.55
SRRT-206ENST00000460194 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
SRRT-206ENST00000460194 FLAD1Q8NFF5 587 aa18.45■□□□□ 0.54
SRRT-206ENST00000460194 CD2APQ9Y5K6 639 aa18.45■□□□□ 0.54
SRRT-206ENST00000460194 WASHC2AQ641Q2 1341 aa18.45■□□□□ 0.54
SRRT-206ENST00000460194 SENP3-EIF4A1A0A087X0R7 540 aa18.44■□□□□ 0.54
SRRT-206ENST00000460194 GRIN3BO60391 1043 aa18.44■□□□□ 0.54
SRRT-206ENST00000460194 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
SRRT-206ENST00000460194 MSH5O43196 834 aa18.43■□□□□ 0.54
SRRT-206ENST00000460194 SMIM5Q71RC9 77 aa18.42■□□□□ 0.54
SRRT-206ENST00000460194 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
SRRT-206ENST00000460194 EYA1Q99502 592 aa18.42■□□□□ 0.54
SRRT-206ENST00000460194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
SRRT-206ENST00000460194 ADCY9O60503 1353 aa18.42■□□□□ 0.54
SRRT-206ENST00000460194 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
SRRT-206ENST00000460194 HMGB2P26583 209 aaKnown RBP18.41■□□□□ 0.54
SRRT-206ENST00000460194 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
SRRT-206ENST00000460194 KIF13BQ9NQT8 1826 aa18.41■□□□□ 0.54
SRRT-206ENST00000460194 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
SRRT-206ENST00000460194 ZNF831Q5JPB2 1677 aa18.4■□□□□ 0.54
SRRT-206ENST00000460194 KIAA1551Q9HCM1 1747 aa18.4■□□□□ 0.54
SRRT-206ENST00000460194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
SRRT-206ENST00000460194 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
SRRT-206ENST00000460194 SIK1P57059 783 aa18.38■□□□□ 0.53
SRRT-206ENST00000460194 ITPK1Q13572 414 aa18.38■□□□□ 0.53
SRRT-206ENST00000460194 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
SRRT-206ENST00000460194 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
SRRT-206ENST00000460194 PHKG2P15735 406 aa18.37■□□□□ 0.53
SRRT-206ENST00000460194 SSFA2P28290 1259 aa18.37■□□□□ 0.53
SRRT-206ENST00000460194 AK7Q96M32 723 aa18.37■□□□□ 0.53
SRRT-206ENST00000460194 ASAP1Q9ULH1 1129 aa18.37■□□□□ 0.53
SRRT-206ENST00000460194 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
SRRT-206ENST00000460194 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
SRRT-206ENST00000460194 KDRP35968 1356 aa18.35■□□□□ 0.53
SRRT-206ENST00000460194 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
SRRT-206ENST00000460194 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
SRRT-206ENST00000460194 TIMELESSQ9UNS1 1208 aa18.35■□□□□ 0.53
SRRT-206ENST00000460194 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
SRRT-206ENST00000460194 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
SRRT-206ENST00000460194 PHF14O94880 888 aa18.34■□□□□ 0.53
SRRT-206ENST00000460194 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms