RNA–Protein interactions for RNA: ENST00000458616.1

NELFA-211, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 792 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-211ENST00000458616 HSP90AB2PQ58FF8 381 aa23.37■■□□□ 1.33
NELFA-211ENST00000458616 MYOM1P52179 1685 aa23.37■■□□□ 1.33
NELFA-211ENST00000458616 NSD2O96028 1365 aa23.37■■□□□ 1.33
NELFA-211ENST00000458616 FHDC1Q9C0D6 1143 aaPredicted RBP23.36■■□□□ 1.33
NELFA-211ENST00000458616 CDCA8Q53HL2 280 aa23.35■■□□□ 1.33
NELFA-211ENST00000458616 SLC27A3Q5K4L6 730 aa23.35■■□□□ 1.33
NELFA-211ENST00000458616 SYT17Q9BSW7 474 aa23.35■■□□□ 1.33
NELFA-211ENST00000458616 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
NELFA-211ENST00000458616 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.33
NELFA-211ENST00000458616 INSRP06213 1382 aa23.33■■□□□ 1.33
NELFA-211ENST00000458616 TIMELESSQ9UNS1 1208 aa23.33■■□□□ 1.33
NELFA-211ENST00000458616 DCAF8L1A6NGE4 600 aa23.31■■□□□ 1.32
NELFA-211ENST00000458616 ARXQ96QS3 562 aa23.3■■□□□ 1.32
NELFA-211ENST00000458616 CGNL1Q0VF96 1302 aa23.3■■□□□ 1.32
NELFA-211ENST00000458616 PNPLA7Q6ZV29 1317 aa23.3■■□□□ 1.32
NELFA-211ENST00000458616 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
NELFA-211ENST00000458616 EMILIN1Q9Y6C2 1016 aa23.29■■□□□ 1.32
NELFA-211ENST00000458616 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
NELFA-211ENST00000458616 FLT4P35916 1363 aa23.27■■□□□ 1.32
NELFA-211ENST00000458616 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.32
NELFA-211ENST00000458616 NSD3Q9BZ95 1437 aa23.27■■□□□ 1.32
NELFA-211ENST00000458616 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
NELFA-211ENST00000458616 SLC16A10Q8TF71 515 aa23.26■■□□□ 1.31
NELFA-211ENST00000458616 UTRNP46939 3433 aa23.26■■□□□ 1.31
NELFA-211ENST00000458616 SMG6Q86US8 1419 aaKnown RBP23.25■■□□□ 1.31
NELFA-211ENST00000458616 KIF20BQ96Q89 1820 aa23.25■■□□□ 1.31
NELFA-211ENST00000458616 CYP27B1O15528 508 aa23.25■■□□□ 1.31
NELFA-211ENST00000458616 PCGF6Q9BYE7 350 aa23.25■■□□□ 1.31
NELFA-211ENST00000458616 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
NELFA-211ENST00000458616 CCNL1Q9UK58 526 aaPredicted RBP23.24■■□□□ 1.31
NELFA-211ENST00000458616 LY75O60449 1722 aa23.24■■□□□ 1.31
NELFA-211ENST00000458616 CLSPNQ9HAW4 1339 aa23.23■■□□□ 1.31
NELFA-211ENST00000458616 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
NELFA-211ENST00000458616 QSER1Q2KHR3 1735 aa23.2■■□□□ 1.3
NELFA-211ENST00000458616 NCAPD2Q15021 1401 aa23.2■■□□□ 1.3
NELFA-211ENST00000458616 WASHC2AQ641Q2 1341 aa23.2■■□□□ 1.3
NELFA-211ENST00000458616 PCDH11XQ9BZA7 1347 aa23.2■■□□□ 1.3
NELFA-211ENST00000458616 PCDH11YQ9BZA8 1340 aa23.2■■□□□ 1.3
NELFA-211ENST00000458616 PPM1GO15355 546 aaPredicted RBP23.2■■□□□ 1.3
NELFA-211ENST00000458616 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
NELFA-211ENST00000458616 COL23A1Q86Y22 540 aaPredicted RBP23.19■■□□□ 1.3
NELFA-211ENST00000458616 POLKQ9UBT6 870 aa23.19■■□□□ 1.3
NELFA-211ENST00000458616 COL24A1Q17RW2 1714 aa23.19■■□□□ 1.3
NELFA-211ENST00000458616 EYA1Q99502 592 aa23.18■■□□□ 1.3
NELFA-211ENST00000458616 MPRIPQ6WCQ1 1025 aa23.17■■□□□ 1.3
NELFA-211ENST00000458616 NKX1-1Q15270 411 aaPredicted RBP23.16■■□□□ 1.3
NELFA-211ENST00000458616 POLD1P28340 1107 aa23.15■■□□□ 1.3
NELFA-211ENST00000458616 PIGBQ92521 554 aa23.14■■□□□ 1.29
NELFA-211ENST00000458616 POLR3GLQ9BT43 218 aa23.14■■□□□ 1.29
NELFA-211ENST00000458616 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
NELFA-211ENST00000458616 ZNF784Q8NCA9 323 aaPredicted RBP23.13■■□□□ 1.29
NELFA-211ENST00000458616 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
NELFA-211ENST00000458616 NLGN2Q8NFZ4 835 aa23.12■■□□□ 1.29
NELFA-211ENST00000458616 ANKRD26Q9UPS8 1709 aa23.12■■□□□ 1.29
NELFA-211ENST00000458616 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
NELFA-211ENST00000458616 MAP2P11137 1827 aaKnown RBP23.11■■□□□ 1.29
NELFA-211ENST00000458616 MSH5O43196 834 aa23.11■■□□□ 1.29
NELFA-211ENST00000458616 TNNT2P45379 298 aaPredicted RBP23.11■■□□□ 1.29
NELFA-211ENST00000458616 AMIGO3Q86WK7 504 aa23.11■■□□□ 1.29
NELFA-211ENST00000458616 SPG7Q9UQ90 795 aa23.11■■□□□ 1.29
NELFA-211ENST00000458616 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
NELFA-211ENST00000458616 EIF4A2Q14240 407 aaKnown RBP23.1■■□□□ 1.29
NELFA-211ENST00000458616 KLHL34Q8N239 644 aa23.1■■□□□ 1.29
NELFA-211ENST00000458616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.29
NELFA-211ENST00000458616 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.29
NELFA-211ENST00000458616 GPR162Q16538 588 aa23.09■■□□□ 1.29
NELFA-211ENST00000458616 PANK3Q9H999 370 aa23.09■■□□□ 1.29
NELFA-211ENST00000458616 MSL1Q68DK7 614 aa23.08■■□□□ 1.29
NELFA-211ENST00000458616 SMIM5Q71RC9 77 aa23.08■■□□□ 1.29
NELFA-211ENST00000458616 SMARCC1Q92922 1105 aaPredicted RBP23.08■■□□□ 1.29
NELFA-211ENST00000458616 ITGB4P16144 1822 aa23.08■■□□□ 1.28
NELFA-211ENST00000458616 GOLGB1Q14789 3259 aaKnown RBP23.06■■□□□ 1.28
NELFA-211ENST00000458616 PHKG2P15735 406 aa23.06■■□□□ 1.28
NELFA-211ENST00000458616 C5P01031 1676 aa23.06■■□□□ 1.28
NELFA-211ENST00000458616 ASAP1Q9ULH1 1129 aa23.05■■□□□ 1.28
NELFA-211ENST00000458616 TAF1LQ8IZX4 1826 aa23.05■■□□□ 1.28
NELFA-211ENST00000458616 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
NELFA-211ENST00000458616 FLAD1Q8NFF5 587 aa23.04■■□□□ 1.28
NELFA-211ENST00000458616 LOC102724428A0A0B4J2F2 783 aa23.03■■□□□ 1.28
NELFA-211ENST00000458616 SIK1P57059 783 aa23.03■■□□□ 1.28
NELFA-211ENST00000458616 CHD4Q14839 1912 aa23.02■■□□□ 1.28
NELFA-211ENST00000458616 YBX3P16989 372 aaKnown RBP eCLIP23.02■■□□□ 1.28
NELFA-211ENST00000458616 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
NELFA-211ENST00000458616 IGSF1Q8N6C5 1336 aa23.02■■□□□ 1.28
NELFA-211ENST00000458616 HMGB2P26583 209 aaKnown RBP23.01■■□□□ 1.27
NELFA-211ENST00000458616 ITPK1Q13572 414 aa23.01■■□□□ 1.27
NELFA-211ENST00000458616 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
NELFA-211ENST00000458616 ATG3Q9NT62 314 aa23.01■■□□□ 1.27
NELFA-211ENST00000458616 TMOD3Q9NYL9 352 aa23.01■■□□□ 1.27
NELFA-211ENST00000458616 C4BP0C0L5 1744 aa23■■□□□ 1.27
NELFA-211ENST00000458616 AK7Q96M32 723 aa23■■□□□ 1.27
NELFA-211ENST00000458616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.99■■□□□ 1.27
NELFA-211ENST00000458616 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
NELFA-211ENST00000458616 PHF14O94880 888 aa22.97■■□□□ 1.27
NELFA-211ENST00000458616 CD2APQ9Y5K6 639 aa22.97■■□□□ 1.27
NELFA-211ENST00000458616 SLC4A9Q96Q91 983 aa22.96■■□□□ 1.27
NELFA-211ENST00000458616 ATP6V1AP38606 617 aa22.95■■□□□ 1.26
NELFA-211ENST00000458616 UBR3Q6ZT12 1888 aa22.95■■□□□ 1.26
NELFA-211ENST00000458616 MORC1Q86VD1 984 aa22.95■■□□□ 1.26
NELFA-211ENST00000458616 PLEKHG2Q9H7P9 1386 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms