RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 A0A1W2PP64 1363 aa23.17■■□□□ 1.3
SHF-202ENST00000458022 LTV1Q96GA3 475 aaPredicted RBP23.17■■□□□ 1.3
SHF-202ENST00000458022 CCNL1Q9UK58 526 aaPredicted RBP23.16■■□□□ 1.3
SHF-202ENST00000458022 FAM208AQ9UK61 1670 aaKnown RBP23.14■■□□□ 1.29
SHF-202ENST00000458022 COL23A1Q86Y22 540 aaPredicted RBP23.14■■□□□ 1.29
SHF-202ENST00000458022 ZCRB1Q8TBF4 217 aaKnown RBP23.14■■□□□ 1.29
SHF-202ENST00000458022 TUBGCP6Q96RT7 1819 aa23.14■■□□□ 1.29
SHF-202ENST00000458022 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
SHF-202ENST00000458022 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
SHF-202ENST00000458022 LY75O60449 1722 aa23.13■■□□□ 1.29
SHF-202ENST00000458022 CARD11Q9BXL7 1154 aa23.12■■□□□ 1.29
SHF-202ENST00000458022 ATP10DQ9P241 1426 aa23.12■■□□□ 1.29
SHF-202ENST00000458022 MAP3K19Q56UN5 1328 aa23.11■■□□□ 1.29
SHF-202ENST00000458022 MSH5O43196 834 aa23.11■■□□□ 1.29
SHF-202ENST00000458022 HOXC9P31274 260 aa23.11■■□□□ 1.29
SHF-202ENST00000458022 MEGF6O75095 1541 aa23.11■■□□□ 1.29
SHF-202ENST00000458022 USP47Q96K76 1375 aa23.11■■□□□ 1.29
SHF-202ENST00000458022 DOT1LQ8TEK3 1739 aa23.11■■□□□ 1.29
SHF-202ENST00000458022 KAT6BQ8WYB5 2073 aa23.1■■□□□ 1.29
SHF-202ENST00000458022 CEP350Q5VT06 3117 aa23.1■■□□□ 1.29
SHF-202ENST00000458022 CD2APQ9Y5K6 639 aa23.09■■□□□ 1.29
SHF-202ENST00000458022 AMPHP49418 695 aa23.08■■□□□ 1.29
SHF-202ENST00000458022 MSL1Q68DK7 614 aa23.08■■□□□ 1.29
SHF-202ENST00000458022 COG3Q96JB2 828 aa23.08■■□□□ 1.29
SHF-202ENST00000458022 CGNL1Q0VF96 1302 aa23.07■■□□□ 1.28
SHF-202ENST00000458022 ADCY9O60503 1353 aa23.06■■□□□ 1.28
SHF-202ENST00000458022 FLAD1Q8NFF5 587 aa23.05■■□□□ 1.28
SHF-202ENST00000458022 GPBP1L1Q9HC44 474 aaPredicted RBP23.05■■□□□ 1.28
SHF-202ENST00000458022 RTL1A6NKG5 1358 aa23.04■■□□□ 1.28
SHF-202ENST00000458022 FBLN1P23142 703 aa23.04■■□□□ 1.28
SHF-202ENST00000458022 HMGB2P26583 209 aaKnown RBP23.04■■□□□ 1.28
SHF-202ENST00000458022 NBPF6Q5VWK0 638 aa23.03■■□□□ 1.28
SHF-202ENST00000458022 NBPF4Q96M43 638 aa23.03■■□□□ 1.28
SHF-202ENST00000458022 HSPA6P17066 643 aa23.02■■□□□ 1.28
SHF-202ENST00000458022 RAPGEF4Q8WZA2 1011 aa23■■□□□ 1.27
SHF-202ENST00000458022 PALLDQ8WX93 1383 aa23■■□□□ 1.27
SHF-202ENST00000458022 USHBP1Q8N6Y0 703 aa22.98■■□□□ 1.27
SHF-202ENST00000458022 C5P01031 1676 aa22.97■■□□□ 1.27
SHF-202ENST00000458022 TATP17735 454 aaPredicted RBP22.97■■□□□ 1.27
SHF-202ENST00000458022 RRS1Q15050 365 aaKnown RBP22.97■■□□□ 1.27
SHF-202ENST00000458022 TESK2Q96S53 571 aa22.97■■□□□ 1.27
SHF-202ENST00000458022 PCDH11XQ9BZA7 1347 aa22.97■■□□□ 1.27
SHF-202ENST00000458022 PCDH11YQ9BZA8 1340 aa22.97■■□□□ 1.27
SHF-202ENST00000458022 SMG6Q86US8 1419 aaKnown RBP22.97■■□□□ 1.27
SHF-202ENST00000458022 RGPD2P0DJD1 1756 aa22.95■■□□□ 1.26
SHF-202ENST00000458022 ZNF526Q8TF50 670 aaPredicted RBP22.95■■□□□ 1.26
SHF-202ENST00000458022 IGSF1Q8N6C5 1336 aa22.94■■□□□ 1.26
SHF-202ENST00000458022 MPRIPQ6WCQ1 1025 aa22.94■■□□□ 1.26
SHF-202ENST00000458022 AMIGO3Q86WK7 504 aa22.93■■□□□ 1.26
SHF-202ENST00000458022 SMARCC1Q92922 1105 aaPredicted RBP22.93■■□□□ 1.26
SHF-202ENST00000458022 AK7Q96M32 723 aa22.93■■□□□ 1.26
SHF-202ENST00000458022 INSRP06213 1382 aa22.92■■□□□ 1.26
SHF-202ENST00000458022 FYB1O15117 783 aa22.92■■□□□ 1.26
SHF-202ENST00000458022 CYP27B1O15528 508 aa22.92■■□□□ 1.26
SHF-202ENST00000458022 SLC24A1O60721 1099 aa22.92■■□□□ 1.26
SHF-202ENST00000458022 NSD3Q9BZ95 1437 aa22.91■■□□□ 1.26
SHF-202ENST00000458022 ST20-MTHFSA0A0A6YYL1 179 aa22.9■■□□□ 1.26
SHF-202ENST00000458022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.9■■□□□ 1.26
SHF-202ENST00000458022 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
SHF-202ENST00000458022 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
SHF-202ENST00000458022 C4BP0C0L5 1744 aa22.9■■□□□ 1.26
SHF-202ENST00000458022 KIF3CO14782 793 aa22.89■■□□□ 1.25
SHF-202ENST00000458022 SSFA2P28290 1259 aa22.89■■□□□ 1.25
SHF-202ENST00000458022 KIF24Q5T7B8 1368 aa22.89■■□□□ 1.25
SHF-202ENST00000458022 PHF14O94880 888 aa22.88■■□□□ 1.25
SHF-202ENST00000458022 TOGARAM1Q9Y4F4 1720 aa22.88■■□□□ 1.25
SHF-202ENST00000458022 FLT4P35916 1363 aa22.88■■□□□ 1.25
SHF-202ENST00000458022 TAF1LQ8IZX4 1826 aa22.87■■□□□ 1.25
SHF-202ENST00000458022 WWC3Q9ULE0 1092 aa22.87■■□□□ 1.25
SHF-202ENST00000458022 SMIM5Q71RC9 77 aa22.86■■□□□ 1.25
SHF-202ENST00000458022 PIGBQ92521 554 aa22.86■■□□□ 1.25
SHF-202ENST00000458022 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
SHF-202ENST00000458022 NKX1-1Q15270 411 aaPredicted RBP22.85■■□□□ 1.25
SHF-202ENST00000458022 CICQ96RK0 1608 aaPredicted RBP22.83■■□□□ 1.25
SHF-202ENST00000458022 LOC102724428A0A0B4J2F2 783 aa22.83■■□□□ 1.25
SHF-202ENST00000458022 SIK1P57059 783 aa22.83■■□□□ 1.25
SHF-202ENST00000458022 LINC00116Q8NCU8 138 aa22.83■■□□□ 1.25
SHF-202ENST00000458022 NCAPD2Q15021 1401 aa22.82■■□□□ 1.24
SHF-202ENST00000458022 UBR3Q6ZT12 1888 aa22.81■■□□□ 1.24
SHF-202ENST00000458022 APLP1P51693 650 aa22.81■■□□□ 1.24
SHF-202ENST00000458022 PKD1L3Q7Z443 1732 aa22.79■■□□□ 1.24
SHF-202ENST00000458022 GNPATO15228 680 aa22.78■■□□□ 1.24
SHF-202ENST00000458022 ITPK1Q13572 414 aa22.78■■□□□ 1.24
SHF-202ENST00000458022 SPG7Q9UQ90 795 aa22.78■■□□□ 1.24
SHF-202ENST00000458022 PXDNLA1KZ92 1463 aa22.78■■□□□ 1.24
SHF-202ENST00000458022 TOMM70O94826 608 aa22.77■■□□□ 1.24
SHF-202ENST00000458022 MMP10P09238 476 aa22.77■■□□□ 1.24
SHF-202ENST00000458022 TMF1P82094 1093 aa22.77■■□□□ 1.24
SHF-202ENST00000458022 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
SHF-202ENST00000458022 MAP2P11137 1827 aaKnown RBP22.77■■□□□ 1.24
SHF-202ENST00000458022 ITGB4P16144 1822 aa22.76■■□□□ 1.23
SHF-202ENST00000458022 TGFB2P61812 414 aa22.76■■□□□ 1.23
SHF-202ENST00000458022 DNAJC5GQ8N7S2 189 aa22.76■■□□□ 1.23
SHF-202ENST00000458022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.76■■□□□ 1.23
SHF-202ENST00000458022 ASAP1Q9ULH1 1129 aa22.76■■□□□ 1.23
SHF-202ENST00000458022 EMILIN1Q9Y6C2 1016 aa22.76■■□□□ 1.23
SHF-202ENST00000458022 ATP6V1AP38606 617 aa22.75■■□□□ 1.23
SHF-202ENST00000458022 NLGN1Q8N2Q7 840 aa22.72■■□□□ 1.23
SHF-202ENST00000458022 BCS1LQ9Y276 419 aa22.72■■□□□ 1.23
SHF-202ENST00000458022 C10orf71Q711Q0 1435 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms