RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
MBD1-210ENST00000457839 USP19O94966 1318 aa20.95■□□□□ 0.94
MBD1-210ENST00000457839 KIF1AQ12756 1690 aa20.95■□□□□ 0.94
MBD1-210ENST00000457839 ATF7IPQ6VMQ6 1270 aa20.95■□□□□ 0.94
MBD1-210ENST00000457839 IGHDP01880 384 aa20.94■□□□□ 0.94
MBD1-210ENST00000457839 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
MBD1-210ENST00000457839 CHL1O00533 1208 aa20.94■□□□□ 0.94
MBD1-210ENST00000457839 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
MBD1-210ENST00000457839 ALDH1L2Q3SY69 923 aa20.93■□□□□ 0.94
MBD1-210ENST00000457839 NPHP3Q7Z494 1330 aa20.92■□□□□ 0.94
MBD1-210ENST00000457839 MVPQ14764 893 aaKnown RBP20.92■□□□□ 0.94
MBD1-210ENST00000457839 BRINP3Q76B58 766 aa20.92■□□□□ 0.94
MBD1-210ENST00000457839 SLIT3O75094 1523 aa20.92■□□□□ 0.94
MBD1-210ENST00000457839 CRB1P82279 1406 aa20.92■□□□□ 0.94
MBD1-210ENST00000457839 CENPQQ7L2Z9 268 aaPredicted RBP20.92■□□□□ 0.94
MBD1-210ENST00000457839 ITPRIPQ8IWB1 547 aa20.91■□□□□ 0.94
MBD1-210ENST00000457839 ANKRD24Q8TF21 1146 aa20.91■□□□□ 0.94
MBD1-210ENST00000457839 PCDHB15Q9Y5E8 787 aa20.91■□□□□ 0.94
MBD1-210ENST00000457839 RGPD2P0DJD1 1756 aa20.9■□□□□ 0.94
MBD1-210ENST00000457839 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
MBD1-210ENST00000457839 TMEM57Q8N5G2 664 aa20.9■□□□□ 0.94
MBD1-210ENST00000457839 MRPL50Q8N5N7 158 aaKnown RBP20.9■□□□□ 0.94
MBD1-210ENST00000457839 KIF16BQ96L93 1317 aa20.9■□□□□ 0.94
MBD1-210ENST00000457839 MED1Q15648 1581 aaPredicted RBP20.9■□□□□ 0.94
MBD1-210ENST00000457839 IL17REQ8NFR9 667 aa20.89■□□□□ 0.93
MBD1-210ENST00000457839 SLAIN2Q9P270 581 aa20.89■□□□□ 0.93
MBD1-210ENST00000457839 TSPYL4Q9UJ04 414 aa20.88■□□□□ 0.93
MBD1-210ENST00000457839 ALS2Q96Q42 1657 aa20.88■□□□□ 0.93
MBD1-210ENST00000457839 CHRNA2Q15822 529 aa20.87■□□□□ 0.93
MBD1-210ENST00000457839 IPO8O15397 1037 aaKnown RBP20.87■□□□□ 0.93
MBD1-210ENST00000457839 ZNF428Q96B54 188 aa20.87■□□□□ 0.93
MBD1-210ENST00000457839 SPATA31A3Q5VYP0 1347 aa20.85■□□□□ 0.93
MBD1-210ENST00000457839 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
MBD1-210ENST00000457839 PXDNQ92626 1479 aa20.85■□□□□ 0.93
MBD1-210ENST00000457839 MS4A1P11836 297 aa20.84■□□□□ 0.93
MBD1-210ENST00000457839 TNS3Q68CZ2 1445 aa20.84■□□□□ 0.93
MBD1-210ENST00000457839 RGS3P49796 1198 aa20.83■□□□□ 0.93
MBD1-210ENST00000457839 LGR6Q9HBX8 967 aa20.83■□□□□ 0.93
MBD1-210ENST00000457839 PHRF1Q9P1Y6 1649 aaKnown RBP20.83■□□□□ 0.93
MBD1-210ENST00000457839 RGPD5Q99666 1765 aa20.83■□□□□ 0.93
MBD1-210ENST00000457839 BRPF1P55201 1214 aaPredicted RBP20.83■□□□□ 0.92
MBD1-210ENST00000457839 ERBB3P21860 1342 aa20.82■□□□□ 0.92
MBD1-210ENST00000457839 HTATSF1O43719 755 aaKnown RBP20.82■□□□□ 0.92
MBD1-210ENST00000457839 DDX19BQ9UMR2 479 aa20.81■□□□□ 0.92
MBD1-210ENST00000457839 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
MBD1-210ENST00000457839 NLRP2Q9NX02 1062 aa20.81■□□□□ 0.92
MBD1-210ENST00000457839 MPRIPQ6WCQ1 1025 aa20.8■□□□□ 0.92
MBD1-210ENST00000457839 NECTIN2Q92692 538 aa20.79■□□□□ 0.92
MBD1-210ENST00000457839 KIAA0232Q92628 1395 aa20.79■□□□□ 0.92
MBD1-210ENST00000457839 CSB-PGBD3P0DP91 1061 aa20.78■□□□□ 0.92
MBD1-210ENST00000457839 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
MBD1-210ENST00000457839 PLEKHO1Q53GL0 409 aaPredicted RBP20.77■□□□□ 0.92
MBD1-210ENST00000457839 ARHGAP45Q92619 1136 aa20.77■□□□□ 0.92
MBD1-210ENST00000457839 ZBTB40Q9NUA8 1239 aa20.77■□□□□ 0.92
MBD1-210ENST00000457839 SLC4A2P04920 1241 aa20.77■□□□□ 0.91
MBD1-210ENST00000457839 AAMPQ13685 434 aa20.77■□□□□ 0.91
MBD1-210ENST00000457839 PDE4AP27815 886 aa20.76■□□□□ 0.91
MBD1-210ENST00000457839 C1orf115Q9H7X2 142 aa20.76■□□□□ 0.91
MBD1-210ENST00000457839 SOS2Q07890 1332 aaPredicted RBP20.75■□□□□ 0.91
MBD1-210ENST00000457839 ABCC4O15439 1325 aa20.74■□□□□ 0.91
MBD1-210ENST00000457839 AKAP4Q5JQC9 854 aa20.74■□□□□ 0.91
MBD1-210ENST00000457839 G2E3Q7L622 706 aa20.74■□□□□ 0.91
MBD1-210ENST00000457839 LRRC37A3O60309 1634 aa20.74■□□□□ 0.91
MBD1-210ENST00000457839 CEMIPQ8WUJ3 1361 aa20.74■□□□□ 0.91
MBD1-210ENST00000457839 RWDD1Q9H446 243 aaPredicted RBP20.73■□□□□ 0.91
MBD1-210ENST00000457839 ZBTB7BO15156 539 aaPredicted RBP20.73■□□□□ 0.91
MBD1-210ENST00000457839 KCNQ3O43525 872 aa20.73■□□□□ 0.91
MBD1-210ENST00000457839 HAP1P54257 671 aaPredicted RBP20.73■□□□□ 0.91
MBD1-210ENST00000457839 AMOTQ4VCS5 1084 aa20.73■□□□□ 0.91
MBD1-210ENST00000457839 C1orf141Q5JVX7 400 aa20.73■□□□□ 0.91
MBD1-210ENST00000457839 NCAPD2Q15021 1401 aa20.73■□□□□ 0.91
MBD1-210ENST00000457839 API5Q9BZZ5 524 aaKnown RBP20.72■□□□□ 0.91
MBD1-210ENST00000457839 RAPGEF4Q8WZA2 1011 aa20.71■□□□□ 0.91
MBD1-210ENST00000457839 PRDM11Q9NQV5 511 aa20.71■□□□□ 0.91
MBD1-210ENST00000457839 TEFQ10587 303 aa20.71■□□□□ 0.91
MBD1-210ENST00000457839 BACH2Q9BYV9 841 aa20.7■□□□□ 0.9
MBD1-210ENST00000457839 COL18A1P39060 1754 aa20.7■□□□□ 0.9
MBD1-210ENST00000457839 F6X3S4 739 aa20.69■□□□□ 0.9
MBD1-210ENST00000457839 RNMTO43148 476 aaKnown RBP20.69■□□□□ 0.9
MBD1-210ENST00000457839 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
MBD1-210ENST00000457839 RGS12O14924 1447 aa20.69■□□□□ 0.9
MBD1-210ENST00000457839 CRYBG1Q9Y4K1 1723 aa20.68■□□□□ 0.9
MBD1-210ENST00000457839 BTBD11A6QL63 1104 aa20.68■□□□□ 0.9
MBD1-210ENST00000457839 CPDO75976 1380 aa20.67■□□□□ 0.9
MBD1-210ENST00000457839 MEGF6O75095 1541 aa20.67■□□□□ 0.9
MBD1-210ENST00000457839 STK31Q9BXU1 1019 aa20.67■□□□□ 0.9
MBD1-210ENST00000457839 CAMTA1Q9Y6Y1 1673 aa20.67■□□□□ 0.9
MBD1-210ENST00000457839 EIF2S2P20042 333 aaKnown RBP20.66■□□□□ 0.9
MBD1-210ENST00000457839 SLC4A10Q6U841 1118 aa20.66■□□□□ 0.9
MBD1-210ENST00000457839 TATP17735 454 aaPredicted RBP20.66■□□□□ 0.9
MBD1-210ENST00000457839 EIF4A1P60842 406 aaKnown RBP20.66■□□□□ 0.9
MBD1-210ENST00000457839 HDAC1Q13547 482 aaPredicted RBP20.66■□□□□ 0.9
MBD1-210ENST00000457839 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
MBD1-210ENST00000457839 NPM2Q86SE8 214 aaKnown RBP20.65■□□□□ 0.9
MBD1-210ENST00000457839 LMO7Q8WWI1 1683 aa20.65■□□□□ 0.9
MBD1-210ENST00000457839 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.9
MBD1-210ENST00000457839 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.9
MBD1-210ENST00000457839 PTPRCP08575 1304 aa20.64■□□□□ 0.89
MBD1-210ENST00000457839 INTS3Q68E01 1043 aaKnown RBP20.64■□□□□ 0.89
MBD1-210ENST00000457839 TOM1L2Q6ZVM7 507 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms