RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
GTF3C2-208ENST00000457748 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.23
GTF3C2-208ENST00000457748 BARGINQ6ZT62 677 aa16.46■□□□□ 0.23
GTF3C2-208ENST00000457748 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
GTF3C2-208ENST00000457748 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
GTF3C2-208ENST00000457748 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
GTF3C2-208ENST00000457748 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
GTF3C2-208ENST00000457748 PLEKHG2Q9H7P9 1386 aa16.43■□□□□ 0.22
GTF3C2-208ENST00000457748 EXOC5O00471 708 aa16.43■□□□□ 0.22
GTF3C2-208ENST00000457748 RXRBP28702 533 aa16.43■□□□□ 0.22
GTF3C2-208ENST00000457748 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
GTF3C2-208ENST00000457748 ZCRB1Q8TBF4 217 aaKnown RBP16.43■□□□□ 0.22
GTF3C2-208ENST00000457748 PLEKHF1Q96S99 279 aa16.43■□□□□ 0.22
GTF3C2-208ENST00000457748 MEGF6O75095 1541 aa16.43■□□□□ 0.22
GTF3C2-208ENST00000457748 DDB1Q16531 1140 aa16.42■□□□□ 0.22
GTF3C2-208ENST00000457748 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
GTF3C2-208ENST00000457748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
GTF3C2-208ENST00000457748 OVOS2A0A0G2JMS6 1433 aa16.42■□□□□ 0.22
GTF3C2-208ENST00000457748 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
GTF3C2-208ENST00000457748 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
GTF3C2-208ENST00000457748 GLI3P10071 1580 aa16.41■□□□□ 0.22
GTF3C2-208ENST00000457748 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
GTF3C2-208ENST00000457748 DISP2A7MBM2 1401 aa16.4■□□□□ 0.22
GTF3C2-208ENST00000457748 APAF1O14727 1248 aa16.4■□□□□ 0.22
GTF3C2-208ENST00000457748 NEUROD2Q15784 382 aa16.4■□□□□ 0.22
GTF3C2-208ENST00000457748 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
GTF3C2-208ENST00000457748 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
GTF3C2-208ENST00000457748 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
GTF3C2-208ENST00000457748 NFE2L2Q16236 605 aa16.39■□□□□ 0.21
GTF3C2-208ENST00000457748 MTHFSDQ2M296 383 aaKnown RBP16.39■□□□□ 0.21
GTF3C2-208ENST00000457748 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
GTF3C2-208ENST00000457748 RIPK4P57078 832 aa16.38■□□□□ 0.21
GTF3C2-208ENST00000457748 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
GTF3C2-208ENST00000457748 SEPT12Q8IYM1 358 aa16.38■□□□□ 0.21
GTF3C2-208ENST00000457748 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
GTF3C2-208ENST00000457748 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
GTF3C2-208ENST00000457748 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
GTF3C2-208ENST00000457748 TNS2Q63HR2 1409 aa16.37■□□□□ 0.21
GTF3C2-208ENST00000457748 HSP90AB1P08238 724 aaKnown RBP16.37■□□□□ 0.21
GTF3C2-208ENST00000457748 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
GTF3C2-208ENST00000457748 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
GTF3C2-208ENST00000457748 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
GTF3C2-208ENST00000457748 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
GTF3C2-208ENST00000457748 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
GTF3C2-208ENST00000457748 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
GTF3C2-208ENST00000457748 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
GTF3C2-208ENST00000457748 SALL2Q9Y467 1007 aaPredicted RBP16.36■□□□□ 0.21
GTF3C2-208ENST00000457748 THSD7AQ9UPZ6 1657 aa16.35■□□□□ 0.21
GTF3C2-208ENST00000457748 SENP3-EIF4A1A0A087X0R7 540 aa16.35■□□□□ 0.21
GTF3C2-208ENST00000457748 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
GTF3C2-208ENST00000457748 MAP3K5Q99683 1374 aa16.35■□□□□ 0.21
GTF3C2-208ENST00000457748 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
GTF3C2-208ENST00000457748 PHKG2P15735 406 aa16.34■□□□□ 0.21
GTF3C2-208ENST00000457748 CYP27B1O15528 508 aa16.33■□□□□ 0.2
GTF3C2-208ENST00000457748 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
GTF3C2-208ENST00000457748 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
GTF3C2-208ENST00000457748 CALD1Q05682 793 aaKnown RBP16.31■□□□□ 0.2
GTF3C2-208ENST00000457748 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
GTF3C2-208ENST00000457748 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
GTF3C2-208ENST00000457748 DCAF5Q96JK2 942 aa16.31■□□□□ 0.2
GTF3C2-208ENST00000457748 DLG5Q8TDM6 1919 aa16.3■□□□□ 0.2
GTF3C2-208ENST00000457748 CCDC27Q2M243 656 aa16.3■□□□□ 0.2
GTF3C2-208ENST00000457748 SHANK3Q9BYB0 1731 aa16.29■□□□□ 0.2
GTF3C2-208ENST00000457748 TEFQ10587 303 aa16.29■□□□□ 0.2
GTF3C2-208ENST00000457748 MCM10Q7L590 875 aa16.29■□□□□ 0.2
GTF3C2-208ENST00000457748 MARCH10Q8NA82 808 aaPredicted RBP16.29■□□□□ 0.2
GTF3C2-208ENST00000457748 RGS12O14924 1447 aa16.28■□□□□ 0.2
GTF3C2-208ENST00000457748 RNMTO43148 476 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-208ENST00000457748 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
GTF3C2-208ENST00000457748 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
GTF3C2-208ENST00000457748 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
GTF3C2-208ENST00000457748 CABP4P57796 275 aa16.27■□□□□ 0.2
GTF3C2-208ENST00000457748 WWC1Q8IX03 1113 aa16.27■□□□□ 0.2
GTF3C2-208ENST00000457748 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
GTF3C2-208ENST00000457748 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
GTF3C2-208ENST00000457748 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.19
GTF3C2-208ENST00000457748 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
GTF3C2-208ENST00000457748 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
GTF3C2-208ENST00000457748 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
GTF3C2-208ENST00000457748 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
GTF3C2-208ENST00000457748 WDR63Q8IWG1 891 aa16.25■□□□□ 0.19
GTF3C2-208ENST00000457748 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-208ENST00000457748 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-208ENST00000457748 ZBED9Q6R2W3 1325 aa16.24■□□□□ 0.19
GTF3C2-208ENST00000457748 FAM182BQ5T319 152 aa16.24■□□□□ 0.19
GTF3C2-208ENST00000457748 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
GTF3C2-208ENST00000457748 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
GTF3C2-208ENST00000457748 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
GTF3C2-208ENST00000457748 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
GTF3C2-208ENST00000457748 GOLGA2Q08379 1002 aa16.23■□□□□ 0.19
GTF3C2-208ENST00000457748 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
GTF3C2-208ENST00000457748 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
GTF3C2-208ENST00000457748 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
GTF3C2-208ENST00000457748 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
GTF3C2-208ENST00000457748 VIRMAQ69YN4 1812 aaKnown RBP16.22■□□□□ 0.19
GTF3C2-208ENST00000457748 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
GTF3C2-208ENST00000457748 GNAI1P63096 354 aa16.22■□□□□ 0.19
GTF3C2-208ENST00000457748 NFATC2IPQ8NCF5 419 aa16.22■□□□□ 0.19
GTF3C2-208ENST00000457748 IL16Q14005 1332 aa16.21■□□□□ 0.19
GTF3C2-208ENST00000457748 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms