RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 STRCP1A6NGW2 1772 aa26.12■■□□□ 1.77
TMED4-203ENST00000457408 LRRC59Q96AG4 307 aaKnown RBP26.12■■□□□ 1.77
TMED4-203ENST00000457408 USP54Q70EL1 1684 aa26.11■■□□□ 1.77
TMED4-203ENST00000457408 ERICH6Q7L0X2 663 aa26.11■■□□□ 1.77
TMED4-203ENST00000457408 DDX19BQ9UMR2 479 aa26.11■■□□□ 1.77
TMED4-203ENST00000457408 NFAT5O94916 1531 aa26.11■■□□□ 1.77
TMED4-203ENST00000457408 RTL1A6NKG5 1358 aa26.1■■□□□ 1.77
TMED4-203ENST00000457408 AAMPQ13685 434 aa26.1■■□□□ 1.77
TMED4-203ENST00000457408 TSPYL4Q9UJ04 414 aa26.09■■□□□ 1.77
TMED4-203ENST00000457408 ZC3H6P61129 1189 aaKnown RBP26.09■■□□□ 1.77
TMED4-203ENST00000457408 GNAT3A8MTJ3 354 aa26.08■■□□□ 1.77
TMED4-203ENST00000457408 NPM2Q86SE8 214 aaKnown RBP26.08■■□□□ 1.76
TMED4-203ENST00000457408 BACH2Q9BYV9 841 aa26.08■■□□□ 1.76
TMED4-203ENST00000457408 CRB1P82279 1406 aa26.07■■□□□ 1.76
TMED4-203ENST00000457408 MST1RQ04912 1400 aa26.07■■□□□ 1.76
TMED4-203ENST00000457408 ARHGEF25Q86VW2 580 aa26.06■■□□□ 1.76
TMED4-203ENST00000457408 RWDD1Q9H446 243 aaPredicted RBP26.06■■□□□ 1.76
TMED4-203ENST00000457408 CADPS2Q86UW7 1296 aa26.06■■□□□ 1.76
TMED4-203ENST00000457408 BRPF1P55201 1214 aaPredicted RBP26.05■■□□□ 1.76
TMED4-203ENST00000457408 AXIN2Q9Y2T1 843 aa26.04■■□□□ 1.76
TMED4-203ENST00000457408 MSH6P52701 1360 aa26.03■■□□□ 1.76
TMED4-203ENST00000457408 CABLES1Q8TDN4 633 aa26.03■■□□□ 1.76
TMED4-203ENST00000457408 IL17REQ8NFR9 667 aa26.02■■□□□ 1.76
TMED4-203ENST00000457408 ANKRD24Q8TF21 1146 aa26.02■■□□□ 1.76
TMED4-203ENST00000457408 ARHGAP45Q92619 1136 aa26■■□□□ 1.75
TMED4-203ENST00000457408 ZBTB40Q9NUA8 1239 aa26■■□□□ 1.75
TMED4-203ENST00000457408 LMTK3Q96Q04 1460 aa26■■□□□ 1.75
TMED4-203ENST00000457408 MAP3K5Q99683 1374 aa26■■□□□ 1.75
TMED4-203ENST00000457408 USP19O94966 1318 aa26■■□□□ 1.75
TMED4-203ENST00000457408 KIF1AQ12756 1690 aa26■■□□□ 1.75
TMED4-203ENST00000457408 ZNF335Q9H4Z2 1342 aaPredicted RBP25.99■■□□□ 1.75
TMED4-203ENST00000457408 TRPM3Q9HCF6 1732 aaPredicted RBP25.99■■□□□ 1.75
TMED4-203ENST00000457408 HTATSF1O43719 755 aaKnown RBP25.99■■□□□ 1.75
TMED4-203ENST00000457408 ANP32AP39687 249 aaKnown RBP25.98■■□□□ 1.75
TMED4-203ENST00000457408 C1orf115Q9H7X2 142 aa25.98■■□□□ 1.75
TMED4-203ENST00000457408 PDZRN3Q9UPQ7 1066 aa25.98■■□□□ 1.75
TMED4-203ENST00000457408 HAP1P54257 671 aaPredicted RBP25.97■■□□□ 1.75
TMED4-203ENST00000457408 KIAA0232Q92628 1395 aa25.97■■□□□ 1.75
TMED4-203ENST00000457408 RGPD2P0DJD1 1756 aa25.97■■□□□ 1.75
TMED4-203ENST00000457408 NECTIN2Q92692 538 aa25.97■■□□□ 1.75
TMED4-203ENST00000457408 SLIT3O75094 1523 aa25.96■■□□□ 1.75
TMED4-203ENST00000457408 NPHP3Q7Z494 1330 aa25.96■■□□□ 1.75
TMED4-203ENST00000457408 DCCP43146 1447 aa25.96■■□□□ 1.75
TMED4-203ENST00000457408 SLC4A2P04920 1241 aa25.96■■□□□ 1.75
TMED4-203ENST00000457408 API5Q9BZZ5 524 aaKnown RBP25.96■■□□□ 1.75
TMED4-203ENST00000457408 LGR6Q9HBX8 967 aa25.95■■□□□ 1.74
TMED4-203ENST00000457408 NCOA3Q9Y6Q9 1424 aa25.95■■□□□ 1.74
TMED4-203ENST00000457408 ZBTB7BO15156 539 aaPredicted RBP25.94■■□□□ 1.74
TMED4-203ENST00000457408 ZNF530Q6P9A1 599 aaPredicted RBP25.94■■□□□ 1.74
TMED4-203ENST00000457408 TAF7Q15545 349 aaPredicted RBP25.93■■□□□ 1.74
TMED4-203ENST00000457408 FAM161AQ3B820 660 aa25.93■■□□□ 1.74
TMED4-203ENST00000457408 ABCC4O15439 1325 aa25.93■■□□□ 1.74
TMED4-203ENST00000457408 STRCQ7RTU9 1775 aa25.92■■□□□ 1.74
TMED4-203ENST00000457408 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
TMED4-203ENST00000457408 MPRIPQ6WCQ1 1025 aa25.92■■□□□ 1.74
TMED4-203ENST00000457408 PLEKHO1Q53GL0 409 aaPredicted RBP25.91■■□□□ 1.74
TMED4-203ENST00000457408 HDAC1Q13547 482 aaPredicted RBP25.91■■□□□ 1.74
TMED4-203ENST00000457408 C8orf34Q49A92 452 aa25.91■■□□□ 1.74
TMED4-203ENST00000457408 BRINP3Q76B58 766 aa25.91■■□□□ 1.74
TMED4-203ENST00000457408 NLRP2Q9NX02 1062 aa25.91■■□□□ 1.74
TMED4-203ENST00000457408 MED1Q15648 1581 aaPredicted RBP25.9■■□□□ 1.74
TMED4-203ENST00000457408 G2E3Q7L622 706 aa25.89■■□□□ 1.74
TMED4-203ENST00000457408 ALS2Q96Q42 1657 aa25.88■■□□□ 1.73
TMED4-203ENST00000457408 CSB-PGBD3P0DP91 1061 aa25.87■■□□□ 1.73
TMED4-203ENST00000457408 SLAIN2Q9P270 581 aa25.87■■□□□ 1.73
TMED4-203ENST00000457408 ERBB3P21860 1342 aa25.87■■□□□ 1.73
TMED4-203ENST00000457408 C1orf141Q5JVX7 400 aa25.87■■□□□ 1.73
TMED4-203ENST00000457408 PHRF1Q9P1Y6 1649 aaKnown RBP25.86■■□□□ 1.73
TMED4-203ENST00000457408 STK31Q9BXU1 1019 aa25.86■■□□□ 1.73
TMED4-203ENST00000457408 CHMP4BQ9H444 224 aaKnown RBP25.86■■□□□ 1.73
TMED4-203ENST00000457408 RGPD5Q99666 1765 aa25.86■■□□□ 1.73
TMED4-203ENST00000457408 SPATA31A3Q5VYP0 1347 aa25.86■■□□□ 1.73
TMED4-203ENST00000457408 AKAP4Q5JQC9 854 aa25.86■■□□□ 1.73
TMED4-203ENST00000457408 SLC4A10Q6U841 1118 aa25.86■■□□□ 1.73
TMED4-203ENST00000457408 TNS3Q68CZ2 1445 aa25.85■■□□□ 1.73
TMED4-203ENST00000457408 XIRP1Q702N8 1843 aaKnown RBP25.85■■□□□ 1.73
TMED4-203ENST00000457408 TEFQ10587 303 aa25.85■■□□□ 1.73
TMED4-203ENST00000457408 F6X3S4 739 aa25.85■■□□□ 1.73
TMED4-203ENST00000457408 AMOTQ4VCS5 1084 aa25.85■■□□□ 1.73
TMED4-203ENST00000457408 NOP58Q9Y2X3 529 aaKnown RBP25.85■■□□□ 1.73
TMED4-203ENST00000457408 IPO9Q96P70 1041 aaKnown RBP25.83■■□□□ 1.73
TMED4-203ENST00000457408 PTPRCP08575 1304 aa25.83■■□□□ 1.72
TMED4-203ENST00000457408 LRRC37A3O60309 1634 aa25.82■■□□□ 1.72
TMED4-203ENST00000457408 CCDC30Q5VVM6 783 aa25.82■■□□□ 1.72
TMED4-203ENST00000457408 PXDNQ92626 1479 aa25.82■■□□□ 1.72
TMED4-203ENST00000457408 KCNQ3O43525 872 aa25.81■■□□□ 1.72
TMED4-203ENST00000457408 INTS3Q68E01 1043 aaKnown RBP25.81■■□□□ 1.72
TMED4-203ENST00000457408 CEMIPQ8WUJ3 1361 aa25.81■■□□□ 1.72
TMED4-203ENST00000457408 EIF2S2P20042 333 aaKnown RBP25.81■■□□□ 1.72
TMED4-203ENST00000457408 SMC5Q8IY18 1101 aa25.81■■□□□ 1.72
TMED4-203ENST00000457408 RAPGEF4Q8WZA2 1011 aa25.81■■□□□ 1.72
TMED4-203ENST00000457408 RGS12O14924 1447 aa25.8■■□□□ 1.72
TMED4-203ENST00000457408 BTBD11A6QL63 1104 aa25.8■■□□□ 1.72
TMED4-203ENST00000457408 RNMTO43148 476 aaKnown RBP25.79■■□□□ 1.72
TMED4-203ENST00000457408 FKBP5Q13451 457 aaPredicted RBP25.79■■□□□ 1.72
TMED4-203ENST00000457408 SIRT2Q8IXJ6 389 aa25.79■■□□□ 1.72
TMED4-203ENST00000457408 LNPKQ9C0E8 428 aa25.79■■□□□ 1.72
TMED4-203ENST00000457408 HDGFL1Q5TGJ6 251 aa25.78■■□□□ 1.72
TMED4-203ENST00000457408 BABAM1Q9NWV8 329 aa25.78■■□□□ 1.72
TMED4-203ENST00000457408 FLIIQ13045 1269 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms