RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 RAPGEF4Q8WZA2 1011 aa18.86■□□□□ 0.61
TIMP1-205ENST00000456754 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
TIMP1-205ENST00000456754 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
TIMP1-205ENST00000456754 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
TIMP1-205ENST00000456754 KRT27Q7Z3Y8 459 aa18.85■□□□□ 0.61
TIMP1-205ENST00000456754 EXOC5O00471 708 aa18.83■□□□□ 0.6
TIMP1-205ENST00000456754 ZCRB1Q8TBF4 217 aaKnown RBP18.83■□□□□ 0.6
TIMP1-205ENST00000456754 DDX54Q8TDD1 881 aaKnown RBP18.83■□□□□ 0.6
TIMP1-205ENST00000456754 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
TIMP1-205ENST00000456754 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
TIMP1-205ENST00000456754 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
TIMP1-205ENST00000456754 MIER1Q8N108 512 aa18.82■□□□□ 0.6
TIMP1-205ENST00000456754 NUDCQ9Y266 331 aa18.82■□□□□ 0.6
TIMP1-205ENST00000456754 PRKAR2BP31323 418 aa18.81■□□□□ 0.6
TIMP1-205ENST00000456754 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
TIMP1-205ENST00000456754 CYP27B1O15528 508 aa18.8■□□□□ 0.6
TIMP1-205ENST00000456754 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
TIMP1-205ENST00000456754 PTF1AQ7RTS3 328 aa18.79■□□□□ 0.6
TIMP1-205ENST00000456754 SBF2Q86WG5 1849 aa18.78■□□□□ 0.6
TIMP1-205ENST00000456754 EP400Q96L91 3159 aa18.78■□□□□ 0.6
TIMP1-205ENST00000456754 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
TIMP1-205ENST00000456754 KAT6BQ8WYB5 2073 aa18.77■□□□□ 0.6
TIMP1-205ENST00000456754 MTHFSDQ2M296 383 aaKnown RBP18.77■□□□□ 0.6
TIMP1-205ENST00000456754 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
TIMP1-205ENST00000456754 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
TIMP1-205ENST00000456754 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.59
TIMP1-205ENST00000456754 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
TIMP1-205ENST00000456754 ACSBG1Q96GR2 724 aa18.76■□□□□ 0.59
TIMP1-205ENST00000456754 PLEKHF1Q96S99 279 aa18.76■□□□□ 0.59
TIMP1-205ENST00000456754 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.59
TIMP1-205ENST00000456754 PLEKHO1Q53GL0 409 aaPredicted RBP18.75■□□□□ 0.59
TIMP1-205ENST00000456754 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
TIMP1-205ENST00000456754 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
TIMP1-205ENST00000456754 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
TIMP1-205ENST00000456754 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
TIMP1-205ENST00000456754 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
TIMP1-205ENST00000456754 FCHSD2O94868 740 aa18.74■□□□□ 0.59
TIMP1-205ENST00000456754 PHKG2P15735 406 aa18.74■□□□□ 0.59
TIMP1-205ENST00000456754 VIRMAQ69YN4 1812 aaKnown RBP18.73■□□□□ 0.59
TIMP1-205ENST00000456754 KCNQ2O43526 872 aa18.73■□□□□ 0.59
TIMP1-205ENST00000456754 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
TIMP1-205ENST00000456754 TRIM37O94972 964 aa18.72■□□□□ 0.59
TIMP1-205ENST00000456754 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.72■□□□□ 0.59
TIMP1-205ENST00000456754 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
TIMP1-205ENST00000456754 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
TIMP1-205ENST00000456754 AMOTQ4VCS5 1084 aa18.71■□□□□ 0.59
TIMP1-205ENST00000456754 FAM196AQ6ZSG2 479 aa18.71■□□□□ 0.59
TIMP1-205ENST00000456754 NHSQ6T4R5 1651 aa18.7■□□□□ 0.58
TIMP1-205ENST00000456754 ITGB4P16144 1822 aa18.7■□□□□ 0.58
TIMP1-205ENST00000456754 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
TIMP1-205ENST00000456754 IFNL2Q8IZJ0 200 aa18.7■□□□□ 0.58
TIMP1-205ENST00000456754 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
TIMP1-205ENST00000456754 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
TIMP1-205ENST00000456754 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
TIMP1-205ENST00000456754 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
TIMP1-205ENST00000456754 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
TIMP1-205ENST00000456754 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
TIMP1-205ENST00000456754 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
TIMP1-205ENST00000456754 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
TIMP1-205ENST00000456754 BTAF1O14981 1849 aa18.67■□□□□ 0.58
TIMP1-205ENST00000456754 BCL9O00512 1426 aa18.67■□□□□ 0.58
TIMP1-205ENST00000456754 C1orf141Q5JVX7 400 aa18.67■□□□□ 0.58
TIMP1-205ENST00000456754 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
TIMP1-205ENST00000456754 DCTN1Q14203 1278 aa18.66■□□□□ 0.58
TIMP1-205ENST00000456754 AKAP4Q5JQC9 854 aa18.66■□□□□ 0.58
TIMP1-205ENST00000456754 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
TIMP1-205ENST00000456754 ADAMTS7Q9UKP4 1686 aa18.66■□□□□ 0.58
TIMP1-205ENST00000456754 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
TIMP1-205ENST00000456754 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
TIMP1-205ENST00000456754 RUNDC1Q96C34 613 aa18.65■□□□□ 0.58
TIMP1-205ENST00000456754 MAPK8IP3Q9UPT6 1336 aa18.65■□□□□ 0.58
TIMP1-205ENST00000456754 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
TIMP1-205ENST00000456754 IL17REQ8NFR9 667 aa18.64■□□□□ 0.57
TIMP1-205ENST00000456754 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
TIMP1-205ENST00000456754 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
TIMP1-205ENST00000456754 MCM10Q7L590 875 aa18.63■□□□□ 0.57
TIMP1-205ENST00000456754 DEFB132Q7Z7B7 95 aa18.63■□□□□ 0.57
TIMP1-205ENST00000456754 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
TIMP1-205ENST00000456754 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
TIMP1-205ENST00000456754 APAF1O14727 1248 aa18.62■□□□□ 0.57
TIMP1-205ENST00000456754 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
TIMP1-205ENST00000456754 DCAF5Q96JK2 942 aa18.62■□□□□ 0.57
TIMP1-205ENST00000456754 PIGBQ92521 554 aa18.61■□□□□ 0.57
TIMP1-205ENST00000456754 BCL11BQ9C0K0 894 aaPredicted RBP18.61■□□□□ 0.57
TIMP1-205ENST00000456754 APBA3O96018 575 aa18.6■□□□□ 0.57
TIMP1-205ENST00000456754 RIPK4P57078 832 aa18.6■□□□□ 0.57
TIMP1-205ENST00000456754 PNNQ9H307 717 aaKnown RBP18.6■□□□□ 0.57
TIMP1-205ENST00000456754 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
TIMP1-205ENST00000456754 SOCS7O14512 581 aa18.59■□□□□ 0.57
TIMP1-205ENST00000456754 NEFMP07197 916 aa18.59■□□□□ 0.57
TIMP1-205ENST00000456754 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
TIMP1-205ENST00000456754 EN1Q05925 392 aaPredicted RBP18.59■□□□□ 0.57
TIMP1-205ENST00000456754 NFATC2IPQ8NCF5 419 aa18.59■□□□□ 0.57
TIMP1-205ENST00000456754 MRC1P22897 1456 aa18.58■□□□□ 0.57
TIMP1-205ENST00000456754 CABP4P57796 275 aa18.58■□□□□ 0.56
TIMP1-205ENST00000456754 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
TIMP1-205ENST00000456754 CEMIPQ8WUJ3 1361 aa18.57■□□□□ 0.56
TIMP1-205ENST00000456754 SLC52A2Q9HAB3 445 aa18.57■□□□□ 0.56
TIMP1-205ENST00000456754 TMOD3Q9NYL9 352 aa18.57■□□□□ 0.56
TIMP1-205ENST00000456754 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms