RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CD163L1Q9NR16 1453 aa16.72■□□□□ 0.27
PTPRE-204ENST00000455661 NEXMIFQ5QGS0 1516 aa16.72■□□□□ 0.27
PTPRE-204ENST00000455661 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
PTPRE-204ENST00000455661 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
PTPRE-204ENST00000455661 PHF14O94880 888 aa16.71■□□□□ 0.27
PTPRE-204ENST00000455661 DNTTIP2Q5QJE6 756 aaKnown RBP16.71■□□□□ 0.27
PTPRE-204ENST00000455661 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
PTPRE-204ENST00000455661 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
PTPRE-204ENST00000455661 POLKQ9UBT6 870 aa16.71■□□□□ 0.27
PTPRE-204ENST00000455661 YEATS2Q9ULM3 1422 aa16.71■□□□□ 0.27
PTPRE-204ENST00000455661 OTUD7AQ8TE49 926 aaPredicted RBP16.71■□□□□ 0.27
PTPRE-204ENST00000455661 KNDC1Q76NI1 1749 aa16.71■□□□□ 0.27
PTPRE-204ENST00000455661 NEK4P51957 841 aa16.7■□□□□ 0.26
PTPRE-204ENST00000455661 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
PTPRE-204ENST00000455661 HAP1P54257 671 aaPredicted RBP16.7■□□□□ 0.26
PTPRE-204ENST00000455661 TMX3Q96JJ7 454 aa16.7■□□□□ 0.26
PTPRE-204ENST00000455661 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
PTPRE-204ENST00000455661 BRD1O95696 1058 aa16.69■□□□□ 0.26
PTPRE-204ENST00000455661 PRAM1Q96QH2 718 aa16.69■□□□□ 0.26
PTPRE-204ENST00000455661 APBB1O00213 710 aa16.69■□□□□ 0.26
PTPRE-204ENST00000455661 CEP85Q6P2H3 762 aa16.69■□□□□ 0.26
PTPRE-204ENST00000455661 MYRIPQ8NFW9 859 aa16.69■□□□□ 0.26
PTPRE-204ENST00000455661 CHAMP1Q96JM3 812 aa16.69■□□□□ 0.26
PTPRE-204ENST00000455661 ARID3AQ99856 593 aa16.69■□□□□ 0.26
PTPRE-204ENST00000455661 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
PTPRE-204ENST00000455661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTPRE-204ENST00000455661 HECW2Q9P2P5 1572 aa16.68■□□□□ 0.26
PTPRE-204ENST00000455661 SMARCA5O60264 1052 aaPredicted RBP16.68■□□□□ 0.26
PTPRE-204ENST00000455661 MCCP23508 829 aa16.68■□□□□ 0.26
PTPRE-204ENST00000455661 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
PTPRE-204ENST00000455661 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
PTPRE-204ENST00000455661 HMGN5P82970 282 aaKnown RBP16.68■□□□□ 0.26
PTPRE-204ENST00000455661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPRE-204ENST00000455661 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
PTPRE-204ENST00000455661 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
PTPRE-204ENST00000455661 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
PTPRE-204ENST00000455661 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
PTPRE-204ENST00000455661 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
PTPRE-204ENST00000455661 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
PTPRE-204ENST00000455661 ABCC3O15438 1527 aa16.67■□□□□ 0.26
PTPRE-204ENST00000455661 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
PTPRE-204ENST00000455661 PTPRMP28827 1452 aa16.67■□□□□ 0.26
PTPRE-204ENST00000455661 HMMRO75330 724 aa16.66■□□□□ 0.26
PTPRE-204ENST00000455661 INTS4Q96HW7 963 aaKnown RBP16.66■□□□□ 0.26
PTPRE-204ENST00000455661 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
PTPRE-204ENST00000455661 CUL4AQ13619 759 aa16.65■□□□□ 0.26
PTPRE-204ENST00000455661 FBLN1P23142 703 aa16.65■□□□□ 0.26
PTPRE-204ENST00000455661 IL13P35225 146 aa16.65■□□□□ 0.26
PTPRE-204ENST00000455661 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
PTPRE-204ENST00000455661 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
PTPRE-204ENST00000455661 RTL1A6NKG5 1358 aa16.64■□□□□ 0.25
PTPRE-204ENST00000455661 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
PTPRE-204ENST00000455661 OSBPL3Q9H4L5 887 aa16.64■□□□□ 0.25
PTPRE-204ENST00000455661 CPSF1Q10570 1443 aaKnown RBP16.63■□□□□ 0.25
PTPRE-204ENST00000455661 NOLC1Q14978 699 aaKnown RBP eCLIP16.63■□□□□ 0.25
PTPRE-204ENST00000455661 PTPRCP08575 1304 aa16.62■□□□□ 0.25
PTPRE-204ENST00000455661 PDE1AP54750 535 aa16.62■□□□□ 0.25
PTPRE-204ENST00000455661 ANAPC15P60006 121 aa16.62■□□□□ 0.25
PTPRE-204ENST00000455661 MAP2P11137 1827 aaKnown RBP16.62■□□□□ 0.25
PTPRE-204ENST00000455661 FAM83GA6ND36 823 aa16.62■□□□□ 0.25
PTPRE-204ENST00000455661 IDI1Q13907 227 aa16.62■□□□□ 0.25
PTPRE-204ENST00000455661 UTP14CQ5TAP6 766 aaKnown RBP16.62■□□□□ 0.25
PTPRE-204ENST00000455661 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
PTPRE-204ENST00000455661 MSH6P52701 1360 aa16.61■□□□□ 0.25
PTPRE-204ENST00000455661 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
PTPRE-204ENST00000455661 LETM1O95202 739 aaPredicted RBP16.61■□□□□ 0.25
PTPRE-204ENST00000455661 SIGLEC1Q9BZZ2 1709 aa16.61■□□□□ 0.25
PTPRE-204ENST00000455661 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
PTPRE-204ENST00000455661 GTF2F1P35269 517 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTPRE-204ENST00000455661 MEIS3Q99687 375 aa16.61■□□□□ 0.25
PTPRE-204ENST00000455661 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
PTPRE-204ENST00000455661 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
PTPRE-204ENST00000455661 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
PTPRE-204ENST00000455661 ZBTB7CA1YPR0 619 aa16.6■□□□□ 0.25
PTPRE-204ENST00000455661 USP48Q86UV5 1035 aa16.6■□□□□ 0.25
PTPRE-204ENST00000455661 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
PTPRE-204ENST00000455661 DMTNQ08495 405 aa16.59■□□□□ 0.25
PTPRE-204ENST00000455661 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
PTPRE-204ENST00000455661 DLG5Q8TDM6 1919 aa16.59■□□□□ 0.25
PTPRE-204ENST00000455661 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
PTPRE-204ENST00000455661 RGS12O14924 1447 aa16.59■□□□□ 0.25
PTPRE-204ENST00000455661 CCDC183Q5T5S1 534 aa16.59■□□□□ 0.25
PTPRE-204ENST00000455661 NOL8Q76FK4 1167 aaKnown RBP16.59■□□□□ 0.25
PTPRE-204ENST00000455661 USP25Q9UHP3 1055 aa16.59■□□□□ 0.25
PTPRE-204ENST00000455661 GADD45BO75293 160 aaPredicted RBP16.58■□□□□ 0.25
PTPRE-204ENST00000455661 KIF3AQ9Y496 699 aa16.58■□□□□ 0.25
PTPRE-204ENST00000455661 ATP7BP35670 1465 aa16.58■□□□□ 0.24
PTPRE-204ENST00000455661 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.24
PTPRE-204ENST00000455661 ADCY5O95622 1261 aa16.58■□□□□ 0.24
PTPRE-204ENST00000455661 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
PTPRE-204ENST00000455661 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
PTPRE-204ENST00000455661 ZNF830Q96NB3 372 aaPredicted RBP16.58■□□□□ 0.24
PTPRE-204ENST00000455661 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPRE-204ENST00000455661 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
PTPRE-204ENST00000455661 ANO2Q9NQ90 1003 aa16.57■□□□□ 0.24
PTPRE-204ENST00000455661 MPNDQ8N594 471 aa16.56■□□□□ 0.24
PTPRE-204ENST00000455661 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
PTPRE-204ENST00000455661 MX1P20591 662 aa16.56■□□□□ 0.24
PTPRE-204ENST00000455661 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
PTPRE-204ENST00000455661 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms