RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 GPR37O15354 613 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 OSBPP22059 807 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 NEUROD2Q15784 382 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 CHRNA2Q15822 529 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 FAM98CQ17RN3 349 aaKnown RBP6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 BARGINQ6ZT62 677 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 KRT27Q7Z3Y8 459 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 KRI1Q8N9T8 703 aaKnown RBP6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 PTCD2Q8WV60 388 aaKnown RBP6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 STAC3Q96MF2 364 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 SIN3AQ96ST3 1273 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 PLCH1Q4KWH8 1693 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 ARHGEF10O15013 1369 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 ARHGEF28Q8N1W1 1705 aaKnown RBP6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 ABCA3Q99758 1704 aa6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 ANKARQ7Z5J8 1434 aa6.78□□□□□ -1.32
GTF3C3-208ENST00000455546 ZNF316A6NFI3 1004 aaPredicted RBP6.78□□□□□ -1.32
GTF3C3-208ENST00000455546 ONECUT3O60422 494 aaPredicted RBP6.78□□□□□ -1.32
GTF3C3-208ENST00000455546 NEUROD1Q13562 356 aa6.78□□□□□ -1.32
GTF3C3-208ENST00000455546 NBPF8Q3BBV2 869 aa6.78□□□□□ -1.32
GTF3C3-208ENST00000455546 CCDC125Q86Z20 511 aa6.78□□□□□ -1.32
GTF3C3-208ENST00000455546 ALS2Q96Q42 1657 aa6.77□□□□□ -1.32
GTF3C3-208ENST00000455546 ACEP12821 1306 aa6.77□□□□□ -1.32
GTF3C3-208ENST00000455546 NWD2Q9ULI1 1742 aa6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 KHSRPQ92945 711 aaKnown RBP eCLIP6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 L3MBTL2Q969R5 705 aa6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 PRDM11Q9NQV5 511 aa6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 STRN4Q9NRL3 753 aa6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 USP35Q9P2H5 1018 aa6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 PCDHGA4Q9Y5G9 962 aa6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 ADGRB2O60241 1585 aa6.77□□□□□ -1.33
GTF3C3-208ENST00000455546 TULP4Q9NRJ4 1543 aa6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 SLC34A2O95436 690 aa6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 SRPK2P78362 688 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 SF3B2Q13435 895 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 ABTB2Q8N961 1025 aa6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 SLAIN1Q8ND83 568 aa6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 SPATA31A5Q5VU36 1347 aa6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 SPATA31A7Q8IWB4 1347 aa6.76□□□□□ -1.33
GTF3C3-208ENST00000455546 EIF3AQ14152 1382 aaKnown RBP6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 KIAA0232Q92628 1395 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 PLEKHG3A1L390 1219 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 ZBTB7CA1YPR0 619 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 PTGER2P43116 358 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 EVA1CP58658 441 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 EN1Q05925 392 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 CDHR5Q9HBB8 845 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 CABP1Q9NZU7 370 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 ITSN1Q15811 1721 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 NRAPQ86VF7 1730 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 CRYBG1Q9Y4K1 1723 aa6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 BLMP54132 1417 aaPredicted RBP6.75□□□□□ -1.33
GTF3C3-208ENST00000455546 COL14A1Q05707 1796 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 ATP7BP35670 1465 aa6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 PSDA5PKW4 1024 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 FECHP22830 423 aa6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 GPBP1L1Q9HC44 474 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 EP400Q96L91 3159 aa6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 SPATA31A1Q5TZJ5 1347 aa6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 CENPJQ9HC77 1338 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-208ENST00000455546 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
GTF3C3-208ENST00000455546 KIAA1210Q9ULL0 1709 aa6.73□□□□□ -1.33
GTF3C3-208ENST00000455546 POLR3AO14802 1390 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-208ENST00000455546 TRIM37O94972 964 aa6.73□□□□□ -1.33
GTF3C3-208ENST00000455546 LARP1Q6PKG0 1096 aaKnown RBP6.73□□□□□ -1.33
GTF3C3-208ENST00000455546 AK7Q96M32 723 aa6.73□□□□□ -1.33
GTF3C3-208ENST00000455546 MAP3K7O43318 606 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 GCP02774 474 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 NUDT7P0C024 238 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 HOXB3P14651 431 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 BAG6P46379 1132 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 EZH2Q15910 746 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 ARSIQ5FYB1 569 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 NLRP13Q86W25 1043 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 SCUBE2Q9NQ36 999 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 PPIP5K1Q6PFW1 1433 aa6.72□□□□□ -1.33
GTF3C3-208ENST00000455546 TOPAZ1Q8N9V7 1692 aa6.71□□□□□ -1.33
GTF3C3-208ENST00000455546 QRICH2Q9H0J4 1663 aa6.71□□□□□ -1.33
GTF3C3-208ENST00000455546 CAMTA1Q9Y6Y1 1673 aa6.71□□□□□ -1.33
GTF3C3-208ENST00000455546 TSR1Q2NL82 804 aaKnown RBP6.71□□□□□ -1.34
GTF3C3-208ENST00000455546 CCDC102AQ96A19 550 aa6.71□□□□□ -1.34
GTF3C3-208ENST00000455546 ANO8Q9HCE9 1232 aaPredicted RBP6.71□□□□□ -1.34
GTF3C3-208ENST00000455546 PCDHGA10Q9Y5H3 936 aa6.71□□□□□ -1.34
GTF3C3-208ENST00000455546 RGPD5Q99666 1765 aa6.71□□□□□ -1.34
GTF3C3-208ENST00000455546 PHRF1Q9P1Y6 1649 aaKnown RBP6.71□□□□□ -1.34
GTF3C3-208ENST00000455546 TRIM66O15016 1216 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 GNPATO15228 680 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 FCHSD2O94868 740 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 PHF14O94880 888 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 APBA3O96018 575 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 PDE3BQ13370 1112 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 R3HDM1Q15032 1099 aaKnown RBP6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 DOK7Q18PE1 504 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 FAM196AQ6ZSG2 479 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 EVC2Q86UK5 1308 aa6.7□□□□□ -1.34
GTF3C3-208ENST00000455546 ROCK2O75116 1388 aaKnown RBP6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 SSH2Q76I76 1423 aa6.69□□□□□ -1.34
GTF3C3-208ENST00000455546 THSD7AQ9UPZ6 1657 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms