RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 ONECUT3O60422 494 aaPredicted RBP14.24□□□□□ -0.13
SYPL1-202ENST00000455385 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
SYPL1-202ENST00000455385 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
SYPL1-202ENST00000455385 APAF1O14727 1248 aa14.23□□□□□ -0.13
SYPL1-202ENST00000455385 OVOS2A0A0G2JMS6 1433 aa14.23□□□□□ -0.13
SYPL1-202ENST00000455385 RBM6P78332 1123 aaKnown RBP14.22□□□□□ -0.13
SYPL1-202ENST00000455385 PLEKHO1Q53GL0 409 aaPredicted RBP14.22□□□□□ -0.13
SYPL1-202ENST00000455385 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
SYPL1-202ENST00000455385 RRP7AQ9Y3A4 280 aaKnown RBP14.22□□□□□ -0.13
SYPL1-202ENST00000455385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
SYPL1-202ENST00000455385 TMPOP42166 694 aaKnown RBP14.21□□□□□ -0.13
SYPL1-202ENST00000455385 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
SYPL1-202ENST00000455385 CDCA7Q9BWT1 371 aaPredicted RBP14.21□□□□□ -0.13
SYPL1-202ENST00000455385 MAPK8IP3Q9UPT6 1336 aa14.21□□□□□ -0.13
SYPL1-202ENST00000455385 WNK3Q9BYP7 1800 aa14.21□□□□□ -0.14
SYPL1-202ENST00000455385 EXOC5O00471 708 aa14.2□□□□□ -0.14
SYPL1-202ENST00000455385 CYP27B1O15528 508 aa14.2□□□□□ -0.14
SYPL1-202ENST00000455385 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
SYPL1-202ENST00000455385 RXRBP28702 533 aa14.2□□□□□ -0.14
SYPL1-202ENST00000455385 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
SYPL1-202ENST00000455385 SEPT12Q8IYM1 358 aa14.2□□□□□ -0.14
SYPL1-202ENST00000455385 SPG7Q9UQ90 795 aa14.2□□□□□ -0.14
SYPL1-202ENST00000455385 PARP4Q9UKK3 1724 aaKnown RBP14.19□□□□□ -0.14
SYPL1-202ENST00000455385 NEFMP07197 916 aa14.19□□□□□ -0.14
SYPL1-202ENST00000455385 DDB1Q16531 1140 aa14.19□□□□□ -0.14
SYPL1-202ENST00000455385 ZNF530Q6P9A1 599 aaPredicted RBP14.19□□□□□ -0.14
SYPL1-202ENST00000455385 DDX54Q8TDD1 881 aaKnown RBP14.19□□□□□ -0.14
SYPL1-202ENST00000455385 SALL2Q9Y467 1007 aaPredicted RBP14.19□□□□□ -0.14
SYPL1-202ENST00000455385 RIPK4P57078 832 aa14.19□□□□□ -0.14
SYPL1-202ENST00000455385 PKD1L3Q7Z443 1732 aa14.19□□□□□ -0.14
SYPL1-202ENST00000455385 THSD7AQ9UPZ6 1657 aa14.19□□□□□ -0.14
SYPL1-202ENST00000455385 PLEKHG2Q9H7P9 1386 aa14.18□□□□□ -0.14
SYPL1-202ENST00000455385 A0A0G2JS52 829 aa14.18□□□□□ -0.14
SYPL1-202ENST00000455385 MYT1Q01538 1121 aa14.18□□□□□ -0.14
SYPL1-202ENST00000455385 GAS2L2Q8NHY3 880 aa14.18□□□□□ -0.14
SYPL1-202ENST00000455385 SHANK3Q9BYB0 1731 aa14.18□□□□□ -0.14
SYPL1-202ENST00000455385 PHKG2P15735 406 aa14.17□□□□□ -0.14
SYPL1-202ENST00000455385 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
SYPL1-202ENST00000455385 MARCH10Q8NA82 808 aaPredicted RBP14.17□□□□□ -0.14
SYPL1-202ENST00000455385 LRRC37A3O60309 1634 aa14.17□□□□□ -0.14
SYPL1-202ENST00000455385 DLG5Q8TDM6 1919 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 AKAP4Q5JQC9 854 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 PCDH11XQ9BZA7 1347 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 PCDH11YQ9BZA8 1340 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 GNAT3A8MTJ3 354 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 HNRNPUQ00839 825 aaKnown RBP eCLIP14.16□□□□□ -0.14
SYPL1-202ENST00000455385 DCTN1Q14203 1278 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 LGR6Q9HBX8 967 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 TNS2Q63HR2 1409 aa14.16□□□□□ -0.14
SYPL1-202ENST00000455385 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
SYPL1-202ENST00000455385 IL17REQ8NFR9 667 aa14.15□□□□□ -0.14
SYPL1-202ENST00000455385 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.15
SYPL1-202ENST00000455385 YTHDC1Q96MU7 727 aaKnown RBP14.15□□□□□ -0.15
SYPL1-202ENST00000455385 THUMPD2Q9BTF0 503 aaKnown RBP14.15□□□□□ -0.15
SYPL1-202ENST00000455385 PDE3BQ13370 1112 aa14.14□□□□□ -0.15
SYPL1-202ENST00000455385 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
SYPL1-202ENST00000455385 FAM182BQ5T319 152 aa14.14□□□□□ -0.15
SYPL1-202ENST00000455385 MCM10Q7L590 875 aa14.14□□□□□ -0.15
SYPL1-202ENST00000455385 MAP3K5Q99683 1374 aa14.14□□□□□ -0.15
SYPL1-202ENST00000455385 WWC1Q8IX03 1113 aa14.13□□□□□ -0.15
SYPL1-202ENST00000455385 RGS12O14924 1447 aa14.13□□□□□ -0.15
SYPL1-202ENST00000455385 BRWD3Q6RI45 1802 aa14.13□□□□□ -0.15
SYPL1-202ENST00000455385 RNMTO43148 476 aaKnown RBP14.12□□□□□ -0.15
SYPL1-202ENST00000455385 HTATSF1O43719 755 aaKnown RBP14.12□□□□□ -0.15
SYPL1-202ENST00000455385 CCDC27Q2M243 656 aa14.12□□□□□ -0.15
SYPL1-202ENST00000455385 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
SYPL1-202ENST00000455385 KDM6AO15550 1401 aaPredicted RBP14.12□□□□□ -0.15
SYPL1-202ENST00000455385 ZNF521Q96K83 1311 aa14.11□□□□□ -0.15
SYPL1-202ENST00000455385 KRT27Q7Z3Y8 459 aa14.11□□□□□ -0.15
SYPL1-202ENST00000455385 RTF1Q92541 710 aaKnown RBP14.11□□□□□ -0.15
SYPL1-202ENST00000455385 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
SYPL1-202ENST00000455385 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
SYPL1-202ENST00000455385 HSP90AB1P08238 724 aaKnown RBP14.1□□□□□ -0.15
SYPL1-202ENST00000455385 NGEFQ8N5V2 710 aa14.1□□□□□ -0.15
SYPL1-202ENST00000455385 LMOD3Q0VAK6 560 aa14.09□□□□□ -0.15
SYPL1-202ENST00000455385 KAT6BQ8WYB5 2073 aa14.09□□□□□ -0.15
SYPL1-202ENST00000455385 ADAMTS7Q9UKP4 1686 aa14.09□□□□□ -0.15
SYPL1-202ENST00000455385 SCN11AQ9UI33 1791 aa14.08□□□□□ -0.16
SYPL1-202ENST00000455385 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
SYPL1-202ENST00000455385 VIRMAQ69YN4 1812 aaKnown RBP14.08□□□□□ -0.16
SYPL1-202ENST00000455385 NFATC2IPQ8NCF5 419 aa14.07□□□□□ -0.16
SYPL1-202ENST00000455385 ACSBG1Q96GR2 724 aa14.07□□□□□ -0.16
SYPL1-202ENST00000455385 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
SYPL1-202ENST00000455385 KCNQ2O43526 872 aa14.07□□□□□ -0.16
SYPL1-202ENST00000455385 PRIM1P49642 420 aaKnown RBP14.07□□□□□ -0.16
SYPL1-202ENST00000455385 PTF1AQ7RTS3 328 aa14.07□□□□□ -0.16
SYPL1-202ENST00000455385 SLC52A2Q9HAB3 445 aa14.07□□□□□ -0.16
SYPL1-202ENST00000455385 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
SYPL1-202ENST00000455385 EP400Q96L91 3159 aa14.06□□□□□ -0.16
SYPL1-202ENST00000455385 ERVV-2B6SEH9 535 aa14.06□□□□□ -0.16
SYPL1-202ENST00000455385 WDR63Q8IWG1 891 aa14.06□□□□□ -0.16
SYPL1-202ENST00000455385 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
SYPL1-202ENST00000455385 MIS18AQ9NYP9 233 aa14.06□□□□□ -0.16
SYPL1-202ENST00000455385 BCL9O00512 1426 aa14.05□□□□□ -0.16
SYPL1-202ENST00000455385 CABP4P57796 275 aa14.05□□□□□ -0.16
SYPL1-202ENST00000455385 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
SYPL1-202ENST00000455385 TEFQ10587 303 aa14.05□□□□□ -0.16
SYPL1-202ENST00000455385 TAF7Q15545 349 aaPredicted RBP14.05□□□□□ -0.16
SYPL1-202ENST00000455385 FAM196AQ6ZSG2 479 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms