RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 FOXK1P85037 733 aa8.6□□□□□ -1.03
SBDSP1-204ENST00000453858 RGPD3A6NKT7 1758 aaPredicted RBP8.59□□□□□ -1.03
SBDSP1-204ENST00000453858 RGPD4Q7Z3J3 1758 aa8.59□□□□□ -1.03
SBDSP1-204ENST00000453858 PPP1R15BQ5SWA1 713 aa8.59□□□□□ -1.03
SBDSP1-204ENST00000453858 ARIH1Q9Y4X5 557 aaPredicted RBP8.59□□□□□ -1.03
SBDSP1-204ENST00000453858 RRBP1Q9P2E9 1410 aaKnown RBP8.58□□□□□ -1.04
SBDSP1-204ENST00000453858 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
SBDSP1-204ENST00000453858 CAMK2BQ13554 666 aa8.58□□□□□ -1.04
SBDSP1-204ENST00000453858 RRP7BPQ9NSQ0 103 aa8.58□□□□□ -1.04
SBDSP1-204ENST00000453858 KIF15Q9NS87 1388 aa8.58□□□□□ -1.04
SBDSP1-204ENST00000453858 PRAG1Q86YV5 1406 aa8.57□□□□□ -1.04
SBDSP1-204ENST00000453858 BARGINQ6ZT62 677 aa8.57□□□□□ -1.04
SBDSP1-204ENST00000453858 KCNV2Q8TDN2 545 aa8.57□□□□□ -1.04
SBDSP1-204ENST00000453858 MARVELD3Q96A59 401 aa8.57□□□□□ -1.04
SBDSP1-204ENST00000453858 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
SBDSP1-204ENST00000453858 STK32BQ9NY57 414 aa8.56□□□□□ -1.04
SBDSP1-204ENST00000453858 CUL9Q8IWT3 2517 aa8.56□□□□□ -1.04
SBDSP1-204ENST00000453858 CCDC144AA2RUR9 1427 aa8.55□□□□□ -1.04
SBDSP1-204ENST00000453858 TNS3Q68CZ2 1445 aa8.55□□□□□ -1.04
SBDSP1-204ENST00000453858 ABCA3Q99758 1704 aa8.55□□□□□ -1.04
SBDSP1-204ENST00000453858 C2orf72A6NCS6 295 aa8.55□□□□□ -1.04
SBDSP1-204ENST00000453858 HOXB3P14651 431 aaPredicted RBP8.55□□□□□ -1.04
SBDSP1-204ENST00000453858 EMP3P54852 163 aa8.55□□□□□ -1.04
SBDSP1-204ENST00000453858 DSG2Q14126 1118 aa8.55□□□□□ -1.04
SBDSP1-204ENST00000453858 SBNO1A3KN83 1393 aa8.54□□□□□ -1.04
SBDSP1-204ENST00000453858 TXNRD1Q16881 649 aa8.54□□□□□ -1.04
SBDSP1-204ENST00000453858 RBM46Q8TBY0 533 aaKnown RBP8.54□□□□□ -1.04
SBDSP1-204ENST00000453858 COL14A1Q05707 1796 aaKnown RBP8.53□□□□□ -1.04
SBDSP1-204ENST00000453858 C11orf95C9JLR9 678 aaPredicted RBP8.53□□□□□ -1.04
SBDSP1-204ENST00000453858 PLPP6Q8IY26 295 aa8.53□□□□□ -1.04
SBDSP1-204ENST00000453858 COL24A1Q17RW2 1714 aa8.53□□□□□ -1.04
SBDSP1-204ENST00000453858 KIAA1210Q9ULL0 1709 aa8.53□□□□□ -1.04
SBDSP1-204ENST00000453858 TECPR2O15040 1411 aa8.53□□□□□ -1.04
SBDSP1-204ENST00000453858 SZT2Q5T011 3432 aa8.52□□□□□ -1.04
SBDSP1-204ENST00000453858 PEAK1Q9H792 1746 aa8.52□□□□□ -1.05
SBDSP1-204ENST00000453858 NUTM2FA1L443 756 aa8.52□□□□□ -1.05
SBDSP1-204ENST00000453858 DOK7Q18PE1 504 aa8.52□□□□□ -1.05
SBDSP1-204ENST00000453858 PRDM10Q9NQV6 1147 aa8.52□□□□□ -1.05
SBDSP1-204ENST00000453858 HFM1A2PYH4 1435 aa8.52□□□□□ -1.05
SBDSP1-204ENST00000453858 CDC42BPGQ6DT37 1551 aa8.52□□□□□ -1.05
SBDSP1-204ENST00000453858 ARHGEF10O15013 1369 aa8.51□□□□□ -1.05
SBDSP1-204ENST00000453858 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
SBDSP1-204ENST00000453858 HOXB1P14653 301 aaPredicted RBP8.51□□□□□ -1.05
SBDSP1-204ENST00000453858 PSME1Q06323 249 aa8.51□□□□□ -1.05
SBDSP1-204ENST00000453858 FSTL1Q12841 308 aa8.51□□□□□ -1.05
SBDSP1-204ENST00000453858 SBF2Q86WG5 1849 aa8.5□□□□□ -1.05
SBDSP1-204ENST00000453858 TMEM92Q6UXU6 159 aa8.5□□□□□ -1.05
SBDSP1-204ENST00000453858 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
SBDSP1-204ENST00000453858 ABHD8Q96I13 439 aa8.5□□□□□ -1.05
SBDSP1-204ENST00000453858 HS3ST6Q96QI5 342 aa8.5□□□□□ -1.05
SBDSP1-204ENST00000453858 DHX57Q6P158 1386 aaKnown RBP8.49□□□□□ -1.05
SBDSP1-204ENST00000453858 SPDYE16A6NNV3 312 aaPredicted RBP8.49□□□□□ -1.05
SBDSP1-204ENST00000453858 SLC16A10Q8TF71 515 aa8.49□□□□□ -1.05
SBDSP1-204ENST00000453858 NMRK2Q9NPI5 230 aa8.49□□□□□ -1.05
SBDSP1-204ENST00000453858 ARHGEF28Q8N1W1 1705 aaKnown RBP8.49□□□□□ -1.05
SBDSP1-204ENST00000453858 POTEB3A0JP26 581 aa8.48□□□□□ -1.05
SBDSP1-204ENST00000453858 POTEBQ6S5H4 581 aa8.48□□□□□ -1.05
SBDSP1-204ENST00000453858 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
SBDSP1-204ENST00000453858 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
SBDSP1-204ENST00000453858 USP19O94966 1318 aa8.48□□□□□ -1.05
SBDSP1-204ENST00000453858 PHRF1Q9P1Y6 1649 aaKnown RBP8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 COL6A3P12111 3177 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 NAIPQ13075 1403 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 FAM205CA6NFA0 338 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 RIMBP2O15034 1052 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 FOXN1O15353 648 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 TBC1D12O60347 775 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 MMRN1Q13201 1228 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 ZNF827Q17R98 1081 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 SMYD5Q6GMV2 418 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 ZNF710Q8N1W2 664 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 TCP11L2Q8N4U5 519 aa8.47□□□□□ -1.05
SBDSP1-204ENST00000453858 BCL9O00512 1426 aa8.46□□□□□ -1.05
SBDSP1-204ENST00000453858 POLD1P28340 1107 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 IQGAP3Q86VI3 1631 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 OVOS2A0A0G2JMS6 1433 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 OVOS2A0A0J9YW53 1432 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 MYOM3Q5VTT5 1437 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 OVOS2Q6IE36 1432 aa8.46□□□□□ -1.06
SBDSP1-204ENST00000453858 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
SBDSP1-204ENST00000453858 PRDM11Q9NQV5 511 aa8.45□□□□□ -1.06
SBDSP1-204ENST00000453858 STRN4Q9NRL3 753 aa8.45□□□□□ -1.06
SBDSP1-204ENST00000453858 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
SBDSP1-204ENST00000453858 ATP7BP35670 1465 aa8.45□□□□□ -1.06
SBDSP1-204ENST00000453858 PAPPAQ13219 1627 aa8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 KIF1AQ12756 1690 aa8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 CHRNA2Q15822 529 aa8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 THRAP3Q9Y2W1 955 aaKnown RBP8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 NRXN1Q9ULB1 1477 aa8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 TULP4Q9NRJ4 1543 aa8.44□□□□□ -1.06
SBDSP1-204ENST00000453858 MARCH10Q8NA82 808 aaPredicted RBP8.43□□□□□ -1.06
SBDSP1-204ENST00000453858 OXER1Q8TDS5 423 aa8.43□□□□□ -1.06
SBDSP1-204ENST00000453858 PTCD2Q8WV60 388 aaKnown RBP8.43□□□□□ -1.06
SBDSP1-204ENST00000453858 LRRC4BQ9NT99 713 aa8.43□□□□□ -1.06
SBDSP1-204ENST00000453858 KIAA0232Q92628 1395 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms