RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 SLC15A2Q16348 729 aa14.39□□□□□ -0.11
LINC01004-202ENST00000450686 ZNF827Q17R98 1081 aa14.39□□□□□ -0.11
LINC01004-202ENST00000450686 KCNQ4P56696 695 aa14.38□□□□□ -0.11
LINC01004-202ENST00000450686 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
LINC01004-202ENST00000450686 DDX54Q8TDD1 881 aaKnown RBP14.37□□□□□ -0.11
LINC01004-202ENST00000450686 TESK2Q96S53 571 aa14.37□□□□□ -0.11
LINC01004-202ENST00000450686 LRRC4BQ9NT99 713 aa14.37□□□□□ -0.11
LINC01004-202ENST00000450686 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
LINC01004-202ENST00000450686 FAM208AQ9UK61 1670 aaKnown RBP14.36□□□□□ -0.11
LINC01004-202ENST00000450686 GOLGB1Q14789 3259 aaKnown RBP14.36□□□□□ -0.11
LINC01004-202ENST00000450686 DOT1LQ8TEK3 1739 aa14.36□□□□□ -0.11
LINC01004-202ENST00000450686 FHDC1Q9C0D6 1143 aaPredicted RBP14.36□□□□□ -0.11
LINC01004-202ENST00000450686 TERF2IPQ9NYB0 399 aa14.36□□□□□ -0.11
LINC01004-202ENST00000450686 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
LINC01004-202ENST00000450686 MAP3K19Q56UN5 1328 aa14.35□□□□□ -0.11
LINC01004-202ENST00000450686 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
LINC01004-202ENST00000450686 IP6K1Q92551 441 aa14.34□□□□□ -0.11
LINC01004-202ENST00000450686 MEGF6O75095 1541 aa14.34□□□□□ -0.11
LINC01004-202ENST00000450686 HOXC9P31274 260 aa14.33□□□□□ -0.12
LINC01004-202ENST00000450686 RRS1Q15050 365 aaKnown RBP14.33□□□□□ -0.12
LINC01004-202ENST00000450686 SYTL4Q96C24 671 aaPredicted RBP14.33□□□□□ -0.12
LINC01004-202ENST00000450686 SGIP1Q9BQI5 828 aa14.33□□□□□ -0.12
LINC01004-202ENST00000450686 COG3Q96JB2 828 aa14.32□□□□□ -0.12
LINC01004-202ENST00000450686 MTFR1LQ9H019 292 aa14.32□□□□□ -0.12
LINC01004-202ENST00000450686 AMPHP49418 695 aa14.31□□□□□ -0.12
LINC01004-202ENST00000450686 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
LINC01004-202ENST00000450686 SYT17Q9BSW7 474 aa14.31□□□□□ -0.12
LINC01004-202ENST00000450686 GGNBP2Q9H3C7 697 aa14.31□□□□□ -0.12
LINC01004-202ENST00000450686 PRIM1P49642 420 aaKnown RBP14.3□□□□□ -0.12
LINC01004-202ENST00000450686 NSD2O96028 1365 aa14.3□□□□□ -0.12
LINC01004-202ENST00000450686 KIF20BQ96Q89 1820 aa14.29□□□□□ -0.12
LINC01004-202ENST00000450686 LY75O60449 1722 aa14.28□□□□□ -0.12
LINC01004-202ENST00000450686 NBPF6Q5VWK0 638 aa14.28□□□□□ -0.12
LINC01004-202ENST00000450686 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
LINC01004-202ENST00000450686 NBPF4Q96M43 638 aa14.28□□□□□ -0.12
LINC01004-202ENST00000450686 ARXQ96QS3 562 aa14.28□□□□□ -0.12
LINC01004-202ENST00000450686 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
LINC01004-202ENST00000450686 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.12
LINC01004-202ENST00000450686 USP47Q96K76 1375 aa14.27□□□□□ -0.12
LINC01004-202ENST00000450686 PNPLA7Q6ZV29 1317 aa14.27□□□□□ -0.12
LINC01004-202ENST00000450686 QSER1Q2KHR3 1735 aa14.27□□□□□ -0.13
LINC01004-202ENST00000450686 FYB1O15117 783 aa14.26□□□□□ -0.13
LINC01004-202ENST00000450686 ZCRB1Q8TBF4 217 aaKnown RBP14.26□□□□□ -0.13
LINC01004-202ENST00000450686 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
LINC01004-202ENST00000450686 CHD4Q14839 1912 aa14.25□□□□□ -0.13
LINC01004-202ENST00000450686 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
LINC01004-202ENST00000450686 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
LINC01004-202ENST00000450686 ZNF784Q8NCA9 323 aaPredicted RBP14.24□□□□□ -0.13
LINC01004-202ENST00000450686 TFCP2L1Q9NZI6 479 aa14.24□□□□□ -0.13
LINC01004-202ENST00000450686 TOGARAM1Q9Y4F4 1720 aa14.24□□□□□ -0.13
LINC01004-202ENST00000450686 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
LINC01004-202ENST00000450686 NLGN2Q8NFZ4 835 aa14.23□□□□□ -0.13
LINC01004-202ENST00000450686 COL24A1Q17RW2 1714 aa14.23□□□□□ -0.13
LINC01004-202ENST00000450686 RTL1A6NKG5 1358 aa14.22□□□□□ -0.13
LINC01004-202ENST00000450686 TMF1P82094 1093 aa14.22□□□□□ -0.13
LINC01004-202ENST00000450686 SLC27A3Q5K4L6 730 aa14.22□□□□□ -0.13
LINC01004-202ENST00000450686 CCNL1Q9UK58 526 aaPredicted RBP14.22□□□□□ -0.13
LINC01004-202ENST00000450686 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
LINC01004-202ENST00000450686 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
LINC01004-202ENST00000450686 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
LINC01004-202ENST00000450686 SMIM5Q71RC9 77 aa14.21□□□□□ -0.13
LINC01004-202ENST00000450686 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
LINC01004-202ENST00000450686 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.13
LINC01004-202ENST00000450686 NSD3Q9BZ95 1437 aa14.21□□□□□ -0.13
LINC01004-202ENST00000450686 C5P01031 1676 aa14.2□□□□□ -0.14
LINC01004-202ENST00000450686 GPR162Q16538 588 aa14.2□□□□□ -0.14
LINC01004-202ENST00000450686 RAPGEF4Q8WZA2 1011 aa14.2□□□□□ -0.14
LINC01004-202ENST00000450686 ITGB4P16144 1822 aa14.2□□□□□ -0.14
LINC01004-202ENST00000450686 SMG6Q86US8 1419 aaKnown RBP14.19□□□□□ -0.14
LINC01004-202ENST00000450686 COL23A1Q86Y22 540 aaPredicted RBP14.19□□□□□ -0.14
LINC01004-202ENST00000450686 TAF1LQ8IZX4 1826 aa14.19□□□□□ -0.14
LINC01004-202ENST00000450686 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
LINC01004-202ENST00000450686 PPM1GO15355 546 aaPredicted RBP14.18□□□□□ -0.14
LINC01004-202ENST00000450686 CYP27B1O15528 508 aa14.18□□□□□ -0.14
LINC01004-202ENST00000450686 TATP17735 454 aaPredicted RBP14.18□□□□□ -0.14
LINC01004-202ENST00000450686 POLD1P28340 1107 aa14.18□□□□□ -0.14
LINC01004-202ENST00000450686 AMIGO3Q86WK7 504 aa14.18□□□□□ -0.14
LINC01004-202ENST00000450686 INSRP06213 1382 aa14.18□□□□□ -0.14
LINC01004-202ENST00000450686 MPRIPQ6WCQ1 1025 aa14.17□□□□□ -0.14
LINC01004-202ENST00000450686 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
LINC01004-202ENST00000450686 FLT4P35916 1363 aa14.17□□□□□ -0.14
LINC01004-202ENST00000450686 PKD1L3Q7Z443 1732 aa14.16□□□□□ -0.14
LINC01004-202ENST00000450686 SLC16A10Q8TF71 515 aa14.16□□□□□ -0.14
LINC01004-202ENST00000450686 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
LINC01004-202ENST00000450686 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
LINC01004-202ENST00000450686 YBX3P16989 372 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC01004-202ENST00000450686 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
LINC01004-202ENST00000450686 WWC3Q9ULE0 1092 aa14.15□□□□□ -0.14
LINC01004-202ENST00000450686 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
LINC01004-202ENST00000450686 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.15
LINC01004-202ENST00000450686 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.15
LINC01004-202ENST00000450686 C4BP0C0L5 1744 aa14.14□□□□□ -0.15
LINC01004-202ENST00000450686 PHF14O94880 888 aa14.13□□□□□ -0.15
LINC01004-202ENST00000450686 TNNT2P45379 298 aaPredicted RBP14.13□□□□□ -0.15
LINC01004-202ENST00000450686 CGNL1Q0VF96 1302 aa14.13□□□□□ -0.15
LINC01004-202ENST00000450686 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
LINC01004-202ENST00000450686 UBR3Q6ZT12 1888 aa14.12□□□□□ -0.15
LINC01004-202ENST00000450686 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
LINC01004-202ENST00000450686 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
LINC01004-202ENST00000450686 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms