RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-202ENST00000449880 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 NUP62CLQ9H1M0 184 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 AXDND1Q5T1B0 1012 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-202ENST00000449880 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 GOLGA6L7A0A1B0GV03 622 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 UBTFL1P0CB47 393 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-202ENST00000449880 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 IDI1Q13907 227 aa16.46■□□□□ 0.23
ITGB4-202ENST00000449880 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.23
ITGB4-202ENST00000449880 PRAG1Q86YV5 1406 aa16.46■□□□□ 0.23
ITGB4-202ENST00000449880 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.23
ITGB4-202ENST00000449880 CEP57L1Q8IYX8 460 aa16.46■□□□□ 0.23
ITGB4-202ENST00000449880 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.23
ITGB4-202ENST00000449880 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.23
ITGB4-202ENST00000449880 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
ITGB4-202ENST00000449880 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
ITGB4-202ENST00000449880 XBP1P17861 261 aa16.45■□□□□ 0.22
ITGB4-202ENST00000449880 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
ITGB4-202ENST00000449880 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
ITGB4-202ENST00000449880 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
ITGB4-202ENST00000449880 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
ITGB4-202ENST00000449880 FCHSD2O94868 740 aa16.44■□□□□ 0.22
ITGB4-202ENST00000449880 ZRSR2Q15696 482 aaKnown RBP16.44■□□□□ 0.22
ITGB4-202ENST00000449880 UBXN4Q92575 508 aa16.44■□□□□ 0.22
ITGB4-202ENST00000449880 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
ITGB4-202ENST00000449880 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
ITGB4-202ENST00000449880 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
ITGB4-202ENST00000449880 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
ITGB4-202ENST00000449880 GOLGA6L10A6NI86 522 aa16.44■□□□□ 0.22
ITGB4-202ENST00000449880 SMTNL1A8MU46 457 aa16.44■□□□□ 0.22
ITGB4-202ENST00000449880 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
ITGB4-202ENST00000449880 FBXO31Q5XUX0 539 aaPredicted RBP16.44■□□□□ 0.22
ITGB4-202ENST00000449880 WAPLQ7Z5K2 1190 aa16.43■□□□□ 0.22
ITGB4-202ENST00000449880 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
ITGB4-202ENST00000449880 NAP1L1P55209 391 aaKnown RBP16.43■□□□□ 0.22
ITGB4-202ENST00000449880 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
ITGB4-202ENST00000449880 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
ITGB4-202ENST00000449880 KRI1Q8N9T8 703 aaKnown RBP16.43■□□□□ 0.22
ITGB4-202ENST00000449880 SYCE3A1L190 88 aa16.43■□□□□ 0.22
ITGB4-202ENST00000449880 CBX1P83916 185 aa16.43■□□□□ 0.22
ITGB4-202ENST00000449880 WASHC4Q2M389 1173 aa16.43■□□□□ 0.22
ITGB4-202ENST00000449880 HS1BP3Q53T59 392 aa16.43■□□□□ 0.22
ITGB4-202ENST00000449880 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 PZPP20742 1482 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 SERPINC1P01008 464 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
ITGB4-202ENST00000449880 KIF18AQ8NI77 898 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 GTPBP4Q9BZE4 634 aaKnown RBP16.42■□□□□ 0.22
ITGB4-202ENST00000449880 GNAI2P04899 355 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 MCM3P25205 808 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
ITGB4-202ENST00000449880 STK38Q15208 465 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 PTPN14Q15678 1187 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 PPFIBP1Q86W92 1011 aa16.42■□□□□ 0.22
ITGB4-202ENST00000449880 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
ITGB4-202ENST00000449880 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
ITGB4-202ENST00000449880 A2MP01023 1474 aa16.41■□□□□ 0.22
ITGB4-202ENST00000449880 ZNF518AQ6AHZ1 1483 aa16.41■□□□□ 0.22
ITGB4-202ENST00000449880 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
ITGB4-202ENST00000449880 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
ITGB4-202ENST00000449880 ERLIN2O94905 339 aa16.41■□□□□ 0.22
ITGB4-202ENST00000449880 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
ITGB4-202ENST00000449880 LUC7LQ9NQ29 371 aaKnown RBP16.41■□□□□ 0.22
ITGB4-202ENST00000449880 CEP170Q5SW79 1584 aa16.41■□□□□ 0.22
ITGB4-202ENST00000449880 ADGRL2O95490 1459 aa16.4■□□□□ 0.22
ITGB4-202ENST00000449880 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
ITGB4-202ENST00000449880 ZNHIT6Q9NWK9 470 aaKnown RBP16.4■□□□□ 0.22
ITGB4-202ENST00000449880 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
ITGB4-202ENST00000449880 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
ITGB4-202ENST00000449880 ZSCAN12O43309 604 aa16.4■□□□□ 0.22
ITGB4-202ENST00000449880 TNPO1Q92973 898 aaKnown RBP16.4■□□□□ 0.22
ITGB4-202ENST00000449880 ERICH4A6NGS2 130 aa16.4■□□□□ 0.22
ITGB4-202ENST00000449880 POTEB2H3BUK9 544 aa16.4■□□□□ 0.22
ITGB4-202ENST00000449880 FSD1Q9BTV5 496 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 ARHGEF12Q9NZN5 1544 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
ITGB4-202ENST00000449880 SPATA32Q96LK8 384 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 MAGEC2Q9UBF1 373 aaPredicted RBP16.39■□□□□ 0.21
ITGB4-202ENST00000449880 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 XPCQ01831 940 aaPredicted RBP16.39■□□□□ 0.21
ITGB4-202ENST00000449880 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
ITGB4-202ENST00000449880 MAGI3Q5TCQ9 1506 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 ANKLE2Q86XL3 938 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 RPAP2Q8IXW5 612 aaPredicted RBP16.39■□□□□ 0.21
ITGB4-202ENST00000449880 PAXBP1Q9Y5B6 917 aa16.39■□□□□ 0.21
ITGB4-202ENST00000449880 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
ITGB4-202ENST00000449880 GIMAP7Q8NHV1 300 aa16.38■□□□□ 0.21
ITGB4-202ENST00000449880 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
ITGB4-202ENST00000449880 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
ITGB4-202ENST00000449880 LARP1BQ659C4 914 aaKnown RBP16.37■□□□□ 0.21
ITGB4-202ENST00000449880 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
ITGB4-202ENST00000449880 NSD2O96028 1365 aa16.37■□□□□ 0.21
ITGB4-202ENST00000449880 CT47A1Q5JQC4 288 aaPredicted RBP16.37■□□□□ 0.21
ITGB4-202ENST00000449880 PRDM10Q9NQV6 1147 aa16.37■□□□□ 0.21
ITGB4-202ENST00000449880 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms