RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 CENPJQ9HC77 1338 aaPredicted RBP10.45□□□□□ -0.74
HDLBP-222ENST00000449504 KLRG1Q96E93 195 aa10.45□□□□□ -0.74
HDLBP-222ENST00000449504 TRPM1Q7Z4N2 1603 aa10.44□□□□□ -0.74
HDLBP-222ENST00000449504 ERBB3P21860 1342 aa10.44□□□□□ -0.74
HDLBP-222ENST00000449504 ANKRD24Q8TF21 1146 aa10.44□□□□□ -0.74
HDLBP-222ENST00000449504 COL24A1Q17RW2 1714 aa10.44□□□□□ -0.74
HDLBP-222ENST00000449504 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
HDLBP-222ENST00000449504 GOLGB1Q14789 3259 aaKnown RBP10.43□□□□□ -0.74
HDLBP-222ENST00000449504 ZNF692Q9BU19 519 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-222ENST00000449504 NMRK2Q9NPI5 230 aa10.43□□□□□ -0.74
HDLBP-222ENST00000449504 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
HDLBP-222ENST00000449504 QSER1Q2KHR3 1735 aa10.42□□□□□ -0.74
HDLBP-222ENST00000449504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDLBP-222ENST00000449504 C16orf71Q8IYS4 520 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-222ENST00000449504 LTV1Q96GA3 475 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-222ENST00000449504 TTC21AQ8NDW8 1320 aa10.41□□□□□ -0.74
HDLBP-222ENST00000449504 JMYQ8N9B5 988 aa10.41□□□□□ -0.74
HDLBP-222ENST00000449504 TUBGCP6Q96RT7 1819 aa10.41□□□□□ -0.74
HDLBP-222ENST00000449504 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.74
HDLBP-222ENST00000449504 USP47Q96K76 1375 aa10.4□□□□□ -0.74
HDLBP-222ENST00000449504 FLAD1Q8NFF5 587 aa10.4□□□□□ -0.74
HDLBP-222ENST00000449504 EVC2Q86UK5 1308 aa10.39□□□□□ -0.75
HDLBP-222ENST00000449504 NFAT5O94916 1531 aa10.39□□□□□ -0.75
HDLBP-222ENST00000449504 NPM3O75607 178 aaKnown RBP10.39□□□□□ -0.75
HDLBP-222ENST00000449504 PHF14O94880 888 aa10.39□□□□□ -0.75
HDLBP-222ENST00000449504 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
HDLBP-222ENST00000449504 SMIM5Q71RC9 77 aa10.39□□□□□ -0.75
HDLBP-222ENST00000449504 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
HDLBP-222ENST00000449504 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
HDLBP-222ENST00000449504 NME9Q86XW9 330 aa10.38□□□□□ -0.75
HDLBP-222ENST00000449504 BCS1LQ9Y276 419 aa10.38□□□□□ -0.75
HDLBP-222ENST00000449504 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-222ENST00000449504 NSD2O96028 1365 aa10.38□□□□□ -0.75
HDLBP-222ENST00000449504 QRICH2Q9H0J4 1663 aa10.38□□□□□ -0.75
HDLBP-222ENST00000449504 DSG3P32926 999 aa10.37□□□□□ -0.75
HDLBP-222ENST00000449504 ZCRB1Q8TBF4 217 aaKnown RBP10.37□□□□□ -0.75
HDLBP-222ENST00000449504 AK7Q96M32 723 aa10.37□□□□□ -0.75
HDLBP-222ENST00000449504 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-222ENST00000449504 RAB3GAP2Q9H2M9 1393 aa10.37□□□□□ -0.75
HDLBP-222ENST00000449504 WDR90Q96KV7 1748 aa10.36□□□□□ -0.75
HDLBP-222ENST00000449504 SLC34A2O95436 690 aa10.36□□□□□ -0.75
HDLBP-222ENST00000449504 HSPA1AP0DMV8 641 aaKnown RBP10.36□□□□□ -0.75
HDLBP-222ENST00000449504 HSPA1BP0DMV9 641 aaKnown RBP10.36□□□□□ -0.75
HDLBP-222ENST00000449504 FSTL1Q12841 308 aa10.36□□□□□ -0.75
HDLBP-222ENST00000449504 AMIGO3Q86WK7 504 aa10.35□□□□□ -0.75
HDLBP-222ENST00000449504 LY75O60449 1722 aa10.34□□□□□ -0.75
HDLBP-222ENST00000449504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
HDLBP-222ENST00000449504 A0A0G2JLW4 131 aa10.34□□□□□ -0.75
HDLBP-222ENST00000449504 MPRIPQ6WCQ1 1025 aa10.34□□□□□ -0.75
HDLBP-222ENST00000449504 RRAGCQ9HB90 399 aa10.34□□□□□ -0.75
HDLBP-222ENST00000449504 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
HDLBP-222ENST00000449504 FCHSD2O94868 740 aa10.33□□□□□ -0.76
HDLBP-222ENST00000449504 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
HDLBP-222ENST00000449504 C9orf131Q5VYM1 1079 aa10.33□□□□□ -0.76
HDLBP-222ENST00000449504 IP6K1Q92551 441 aa10.33□□□□□ -0.76
HDLBP-222ENST00000449504 USP31Q70CQ4 1352 aa10.33□□□□□ -0.76
HDLBP-222ENST00000449504 PALLDQ8WX93 1383 aa10.32□□□□□ -0.76
HDLBP-222ENST00000449504 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
HDLBP-222ENST00000449504 MMP10P09238 476 aa10.31□□□□□ -0.76
HDLBP-222ENST00000449504 KDM2BQ8NHM5 1336 aa10.31□□□□□ -0.76
HDLBP-222ENST00000449504 KIAA1210Q9ULL0 1709 aa10.3□□□□□ -0.76
HDLBP-222ENST00000449504 DPEP1P16444 411 aa10.3□□□□□ -0.76
HDLBP-222ENST00000449504 AMPHP49418 695 aa10.3□□□□□ -0.76
HDLBP-222ENST00000449504 TGFB2P61812 414 aa10.3□□□□□ -0.76
HDLBP-222ENST00000449504 USHBP1Q8N6Y0 703 aa10.3□□□□□ -0.76
HDLBP-222ENST00000449504 SMC1BQ8NDV3 1235 aa10.3□□□□□ -0.76
HDLBP-222ENST00000449504 LTN1O94822 1766 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 KCPQ6ZWJ8 1503 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 C5P01031 1676 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 FBLN1P23142 703 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 SSFA2P28290 1259 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 HDGFL2Q7Z4V5 671 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-222ENST00000449504 RAPGEF4Q8WZA2 1011 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-222ENST00000449504 RNF181Q9P0P0 153 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
HDLBP-222ENST00000449504 CICQ96RK0 1608 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-222ENST00000449504 MEGF6O75095 1541 aa10.28□□□□□ -0.76
HDLBP-222ENST00000449504 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
HDLBP-222ENST00000449504 GNPATO15228 680 aa10.28□□□□□ -0.76
HDLBP-222ENST00000449504 HOXC9P31274 260 aa10.28□□□□□ -0.76
HDLBP-222ENST00000449504 TATP17735 454 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-222ENST00000449504 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
HDLBP-222ENST00000449504 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
HDLBP-222ENST00000449504 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
HDLBP-222ENST00000449504 SLC12A5Q9H2X9 1139 aa10.27□□□□□ -0.77
HDLBP-222ENST00000449504 C4BP0C0L5 1744 aa10.27□□□□□ -0.77
HDLBP-222ENST00000449504 PLEKHG2Q9H7P9 1386 aa10.26□□□□□ -0.77
HDLBP-222ENST00000449504 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
HDLBP-222ENST00000449504 USP54Q70EL1 1684 aa10.26□□□□□ -0.77
HDLBP-222ENST00000449504 CCDC87Q9NVE4 849 aa10.26□□□□□ -0.77
HDLBP-222ENST00000449504 MAP3K19Q56UN5 1328 aa10.26□□□□□ -0.77
HDLBP-222ENST00000449504 LOC102724428A0A0B4J2F2 783 aa10.25□□□□□ -0.77
HDLBP-222ENST00000449504 SIK1P57059 783 aa10.25□□□□□ -0.77
HDLBP-222ENST00000449504 TMF1P82094 1093 aa10.25□□□□□ -0.77
HDLBP-222ENST00000449504 PIGBQ92521 554 aa10.25□□□□□ -0.77
HDLBP-222ENST00000449504 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
HDLBP-222ENST00000449504 TRAPPC3LQ5T215 181 aa10.24□□□□□ -0.77
HDLBP-222ENST00000449504 NLGN1Q8N2Q7 840 aa10.24□□□□□ -0.77
HDLBP-222ENST00000449504 COG3Q96JB2 828 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms