RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 GPS2Q13227 327 aa12.39□□□□□ -0.43
CTC1-202ENST00000449476 MPNDQ8N594 471 aa12.39□□□□□ -0.43
CTC1-202ENST00000449476 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
CTC1-202ENST00000449476 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
CTC1-202ENST00000449476 ZSCAN31Q96LW9 406 aaPredicted RBP12.39□□□□□ -0.43
CTC1-202ENST00000449476 POGZQ7Z3K3 1410 aa12.39□□□□□ -0.43
CTC1-202ENST00000449476 GLRX3O76003 335 aaKnown RBP12.38□□□□□ -0.43
CTC1-202ENST00000449476 BRMS1Q9HCU9 246 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 PRDM11Q9NQV5 511 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 IL16Q14005 1332 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 FBLN1P23142 703 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 PCDHB15Q9Y5E8 787 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 ESPNB1AK53 854 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 SPC24Q8NBT2 197 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 MNS1Q8NEH6 495 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 TNMDQ9H2S6 317 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
CTC1-202ENST00000449476 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 PLCH2O75038 1416 aa12.38□□□□□ -0.43
CTC1-202ENST00000449476 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 CCDC70Q6NSX1 233 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.436e-6■■■□□ 19.2
CTC1-202ENST00000449476 NUP160Q12769 1436 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 FKBP4Q02790 459 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTC1-202ENST00000449476 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
CTC1-202ENST00000449476 MBIPQ9NS73 344 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 ANKRD36BQ8N2N9 1353 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 CASTP20810 708 aaKnown RBP12.37□□□□□ -0.43
CTC1-202ENST00000449476 ME1P48163 572 aa12.37□□□□□ -0.43
CTC1-202ENST00000449476 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
CTC1-202ENST00000449476 PDILTQ8N807 584 aa12.36□□□□□ -0.43
CTC1-202ENST00000449476 MTMR7Q9Y216 660 aa12.36□□□□□ -0.43
CTC1-202ENST00000449476 KRT32Q14532 448 aa12.36□□□□□ -0.43
CTC1-202ENST00000449476 ZNF771Q7L3S4 317 aaPredicted RBP12.36□□□□□ -0.43
CTC1-202ENST00000449476 TBC1D32Q96NH3 1257 aa12.36□□□□□ -0.43
CTC1-202ENST00000449476 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
CTC1-202ENST00000449476 SMC2O95347 1197 aa12.36□□□□□ -0.43
CTC1-202ENST00000449476 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
CTC1-202ENST00000449476 FLIIQ13045 1269 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 PTPRCP08575 1304 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 DUOX2Q9NRD8 1548 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
CTC1-202ENST00000449476 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
CTC1-202ENST00000449476 JMYQ8N9B5 988 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 SPATA32Q96LK8 384 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 CTTNBP2Q8WZ74 1663 aa12.35□□□□□ -0.43
CTC1-202ENST00000449476 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
CTC1-202ENST00000449476 PHF8Q9UPP1 1060 aa12.34□□□□□ -0.43
CTC1-202ENST00000449476 SYCE3A1L190 88 aa12.34□□□□□ -0.43
CTC1-202ENST00000449476 SSFA2P28290 1259 aa12.34□□□□□ -0.43
CTC1-202ENST00000449476 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
CTC1-202ENST00000449476 DNAAF4Q8WXU2 420 aa12.34□□□□□ -0.43
CTC1-202ENST00000449476 TNPO1Q92973 898 aaKnown RBP12.34□□□□□ -0.43
CTC1-202ENST00000449476 CFAP43Q8NDM7 1665 aa12.34□□□□□ -0.43
CTC1-202ENST00000449476 HDAC1Q13547 482 aaPredicted RBP12.34□□□□□ -0.43
CTC1-202ENST00000449476 MAP7D2Q96T17 732 aa12.34□□□□□ -0.43
CTC1-202ENST00000449476 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
CTC1-202ENST00000449476 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
CTC1-202ENST00000449476 ARGLU1Q9NWB6 273 aaPredicted RBP12.34□□□□□ -0.43
CTC1-202ENST00000449476 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 MTERF4Q7Z6M4 381 aaKnown RBP12.33□□□□□ -0.44
CTC1-202ENST00000449476 BOLA2Q9H3K6 86 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 TTC21BQ7Z4L5 1316 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 FOXO3O43524 673 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 CEBPAP49715 358 aaPredicted RBP12.33□□□□□ -0.44
CTC1-202ENST00000449476 CCDC83Q8IWF9 413 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.44
CTC1-202ENST00000449476 MPHOSPH8Q99549 860 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 CTNNA3Q9UI47 895 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 CFAP45Q9UL16 551 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 NUP62CLQ9H1M0 184 aa12.33□□□□□ -0.44
CTC1-202ENST00000449476 POLR3AO14802 1390 aaPredicted RBP12.32□□□□□ -0.44
CTC1-202ENST00000449476 PDIA4P13667 645 aaKnown RBP12.32□□□□□ -0.44
CTC1-202ENST00000449476 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
CTC1-202ENST00000449476 PLEKHH1Q9ULM0 1364 aa12.32□□□□□ -0.44
CTC1-202ENST00000449476 ACEP12821 1306 aa12.32□□□□□ -0.44
CTC1-202ENST00000449476 DBF4Q9UBU7 674 aaPredicted RBP12.32□□□□□ -0.44
CTC1-202ENST00000449476 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
CTC1-202ENST00000449476 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
CTC1-202ENST00000449476 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
CTC1-202ENST00000449476 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
CTC1-202ENST00000449476 WDR62O43379 1518 aa12.31□□□□□ -0.44
CTC1-202ENST00000449476 TRAPPC8Q9Y2L5 1435 aa12.31□□□□□ -0.44
CTC1-202ENST00000449476 STK11IPQ8N1F8 1099 aa12.31□□□□□ -0.44
CTC1-202ENST00000449476 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
CTC1-202ENST00000449476 NUCB1Q02818 461 aa12.31□□□□□ -0.44
CTC1-202ENST00000449476 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms