RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PSDA5PKW4 1024 aaPredicted RBP19.28■□□□□ 0.68
RTFDC1-204ENST00000449062 EIF4A2Q14240 407 aaKnown RBP19.28■□□□□ 0.68
RTFDC1-204ENST00000449062 ACSBG1Q96GR2 724 aa19.28■□□□□ 0.68
RTFDC1-204ENST00000449062 R3HDM1Q15032 1099 aaKnown RBP19.27■□□□□ 0.68
RTFDC1-204ENST00000449062 RAPGEF4Q8WZA2 1011 aa19.27■□□□□ 0.68
RTFDC1-204ENST00000449062 ANKRD26Q9UPS8 1709 aa19.27■□□□□ 0.68
RTFDC1-204ENST00000449062 TATP17735 454 aaPredicted RBP19.26■□□□□ 0.67
RTFDC1-204ENST00000449062 TXNRD1Q16881 649 aa19.24■□□□□ 0.67
RTFDC1-204ENST00000449062 CYP27B1O15528 508 aa19.23■□□□□ 0.67
RTFDC1-204ENST00000449062 PRIM1P49642 420 aaKnown RBP19.23■□□□□ 0.67
RTFDC1-204ENST00000449062 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
RTFDC1-204ENST00000449062 RREB1Q92766 1687 aa19.22■□□□□ 0.67
RTFDC1-204ENST00000449062 NBPF14Q5TI25 921 aa19.21■□□□□ 0.67
RTFDC1-204ENST00000449062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.21■□□□□ 0.672e-7■□□□□ 9.7
RTFDC1-204ENST00000449062 IGSF1Q8N6C5 1336 aa19.21■□□□□ 0.67
RTFDC1-204ENST00000449062 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
RTFDC1-204ENST00000449062 ANO8Q9HCE9 1232 aaPredicted RBP19.2■□□□□ 0.66
RTFDC1-204ENST00000449062 IL13P35225 146 aa19.19■□□□□ 0.66
RTFDC1-204ENST00000449062 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
RTFDC1-204ENST00000449062 KAT6BQ8WYB5 2073 aa19.19■□□□□ 0.66
RTFDC1-204ENST00000449062 SHANK3Q9BYB0 1731 aa19.19■□□□□ 0.66
RTFDC1-204ENST00000449062 RGPD3A6NKT7 1758 aaPredicted RBP19.19■□□□□ 0.66
RTFDC1-204ENST00000449062 RGPD4Q7Z3J3 1758 aa19.19■□□□□ 0.66
RTFDC1-204ENST00000449062 NUP188Q5SRE5 1749 aa19.18■□□□□ 0.66
RTFDC1-204ENST00000449062 MTHFSP49914 203 aa19.18■□□□□ 0.66
RTFDC1-204ENST00000449062 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
RTFDC1-204ENST00000449062 PCDH11XQ9BZA7 1347 aa19.18■□□□□ 0.66
RTFDC1-204ENST00000449062 PCDH11YQ9BZA8 1340 aa19.18■□□□□ 0.66
RTFDC1-204ENST00000449062 LRRC4BQ9NT99 713 aa19.17■□□□□ 0.66
RTFDC1-204ENST00000449062 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
RTFDC1-204ENST00000449062 PLEKHG2Q9H7P9 1386 aa19.15■□□□□ 0.66
RTFDC1-204ENST00000449062 SLC15A2Q16348 729 aa19.13■□□□□ 0.65
RTFDC1-204ENST00000449062 AEBP1Q8IUX7 1158 aa19.13■□□□□ 0.65
RTFDC1-204ENST00000449062 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
RTFDC1-204ENST00000449062 BTAF1O14981 1849 aa19.12■□□□□ 0.65
RTFDC1-204ENST00000449062 PHKG2P15735 406 aa19.12■□□□□ 0.65
RTFDC1-204ENST00000449062 PDGFDQ9GZP0 370 aaPredicted RBP19.12■□□□□ 0.65
RTFDC1-204ENST00000449062 KDRP35968 1356 aa19.11■□□□□ 0.65
RTFDC1-204ENST00000449062 SLC27A3Q5K4L6 730 aa19.11■□□□□ 0.65
RTFDC1-204ENST00000449062 IFNL2Q8IZJ0 200 aa19.1■□□□□ 0.65
RTFDC1-204ENST00000449062 PIGBQ92521 554 aa19.1■□□□□ 0.65
RTFDC1-204ENST00000449062 PKD1L3Q7Z443 1732 aa19.1■□□□□ 0.65
RTFDC1-204ENST00000449062 KCNQ4P56696 695 aa19.09■□□□□ 0.65
RTFDC1-204ENST00000449062 SULT6B1Q6IMI4 303 aa19.09■□□□□ 0.65
RTFDC1-204ENST00000449062 AKT1S1Q96B36 256 aa19.09■□□□□ 0.65
RTFDC1-204ENST00000449062 STK32BQ9NY57 414 aa19.09■□□□□ 0.65
RTFDC1-204ENST00000449062 PLEKHO1Q53GL0 409 aaPredicted RBP19.08■□□□□ 0.64
RTFDC1-204ENST00000449062 MPRIPQ6WCQ1 1025 aa19.08■□□□□ 0.64
RTFDC1-204ENST00000449062 ZNF827Q17R98 1081 aa19.07■□□□□ 0.64
RTFDC1-204ENST00000449062 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
RTFDC1-204ENST00000449062 LRP5O75197 1615 aa19.07■□□□□ 0.64
RTFDC1-204ENST00000449062 DOT1LQ8TEK3 1739 aa19.06■□□□□ 0.64
RTFDC1-204ENST00000449062 DIAPH1O60610 1272 aaKnown RBP19.06■□□□□ 0.64
RTFDC1-204ENST00000449062 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
RTFDC1-204ENST00000449062 PAPPAQ13219 1627 aa19.04■□□□□ 0.64
RTFDC1-204ENST00000449062 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
RTFDC1-204ENST00000449062 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
RTFDC1-204ENST00000449062 ZNF530Q6P9A1 599 aaPredicted RBP19.03■□□□□ 0.64
RTFDC1-204ENST00000449062 DCAF5Q96JK2 942 aa19.03■□□□□ 0.64
RTFDC1-204ENST00000449062 SPON1Q9HCB6 807 aa19.03■□□□□ 0.64
RTFDC1-204ENST00000449062 CCNL1Q9UK58 526 aaPredicted RBP19.03■□□□□ 0.64
RTFDC1-204ENST00000449062 PPP2R1AP30153 589 aa19.02■□□□□ 0.64
RTFDC1-204ENST00000449062 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
RTFDC1-204ENST00000449062 TOGARAM1Q9Y4F4 1720 aa19.02■□□□□ 0.63
RTFDC1-204ENST00000449062 HMOX1P09601 288 aa19.01■□□□□ 0.63
RTFDC1-204ENST00000449062 PTGER2P43116 358 aa19.01■□□□□ 0.63
RTFDC1-204ENST00000449062 ASAP1Q9ULH1 1129 aa19.01■□□□□ 0.63
RTFDC1-204ENST00000449062 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
RTFDC1-204ENST00000449062 LY75O60449 1722 aa19■□□□□ 0.63
RTFDC1-204ENST00000449062 HSP90AB1P08238 724 aaKnown RBP19■□□□□ 0.63
RTFDC1-204ENST00000449062 SGIP1Q9BQI5 828 aa19■□□□□ 0.63
RTFDC1-204ENST00000449062 ATG3Q9NT62 314 aa19■□□□□ 0.63
RTFDC1-204ENST00000449062 TMOD3Q9NYL9 352 aa19■□□□□ 0.63
RTFDC1-204ENST00000449062 CASZ1Q86V15 1759 aa18.99■□□□□ 0.63
RTFDC1-204ENST00000449062 ZBTB7AO95365 584 aa18.99■□□□□ 0.63
RTFDC1-204ENST00000449062 KDM6AO15550 1401 aaPredicted RBP18.99■□□□□ 0.63
RTFDC1-204ENST00000449062 PNPLA7Q6ZV29 1317 aa18.99■□□□□ 0.63
RTFDC1-204ENST00000449062 ITGB4P16144 1822 aa18.98■□□□□ 0.63
RTFDC1-204ENST00000449062 MTHFSDQ2M296 383 aaKnown RBP18.97■□□□□ 0.63
RTFDC1-204ENST00000449062 MTFR1LQ9H019 292 aa18.97■□□□□ 0.63
RTFDC1-204ENST00000449062 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
RTFDC1-204ENST00000449062 LOC102724428A0A0B4J2F2 783 aa18.96■□□□□ 0.63
RTFDC1-204ENST00000449062 SIK1P57059 783 aa18.96■□□□□ 0.63
RTFDC1-204ENST00000449062 AKAP4Q5JQC9 854 aa18.96■□□□□ 0.63
RTFDC1-204ENST00000449062 SLC4A9Q96Q91 983 aa18.96■□□□□ 0.63
RTFDC1-204ENST00000449062 TFCP2L1Q9NZI6 479 aa18.96■□□□□ 0.63
RTFDC1-204ENST00000449062 C1orf141Q5JVX7 400 aa18.95■□□□□ 0.62
RTFDC1-204ENST00000449062 NFATC2IPQ8NCF5 419 aa18.95■□□□□ 0.62
RTFDC1-204ENST00000449062 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
RTFDC1-204ENST00000449062 LGR6Q9HBX8 967 aa18.95■□□□□ 0.62
RTFDC1-204ENST00000449062 U2SURPO15042 1029 aaKnown RBP18.94■□□□□ 0.62
RTFDC1-204ENST00000449062 ITPK1Q13572 414 aa18.94■□□□□ 0.62
RTFDC1-204ENST00000449062 HMGB2P26583 209 aaKnown RBP18.93■□□□□ 0.62
RTFDC1-204ENST00000449062 CABP4P57796 275 aa18.93■□□□□ 0.62
RTFDC1-204ENST00000449062 AMIGO3Q86WK7 504 aa18.93■□□□□ 0.62
RTFDC1-204ENST00000449062 COL23A1Q86Y22 540 aaPredicted RBP18.93■□□□□ 0.62
RTFDC1-204ENST00000449062 CFAP53Q96M91 514 aa18.93■□□□□ 0.62
RTFDC1-204ENST00000449062 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
RTFDC1-204ENST00000449062 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
RTFDC1-204ENST00000449062 LINC00116Q8NCU8 138 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms