RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
PTMA-208ENST00000448874 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
PTMA-208ENST00000448874 CARD14Q9BXL6 1004 aa23.16■■□□□ 1.3
PTMA-208ENST00000448874 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
PTMA-208ENST00000448874 LRRC4BQ9NT99 713 aa23.15■■□□□ 1.3
PTMA-208ENST00000448874 INSRP06213 1382 aa23.14■■□□□ 1.3
PTMA-208ENST00000448874 FLT4P35916 1363 aa23.14■■□□□ 1.3
PTMA-208ENST00000448874 ZNF827Q17R98 1081 aa23.14■■□□□ 1.29
PTMA-208ENST00000448874 MTFR1LQ9H019 292 aa23.14■■□□□ 1.29
PTMA-208ENST00000448874 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
PTMA-208ENST00000448874 HSP90AB2PQ58FF8 381 aa23.13■■□□□ 1.29
PTMA-208ENST00000448874 NSD2O96028 1365 aa23.13■■□□□ 1.29
PTMA-208ENST00000448874 KIF24Q5T7B8 1368 aa23.13■■□□□ 1.29
PTMA-208ENST00000448874 RAPGEF4Q8WZA2 1011 aa23.12■■□□□ 1.29
PTMA-208ENST00000448874 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
PTMA-208ENST00000448874 LY75O60449 1722 aa23.11■■□□□ 1.29
PTMA-208ENST00000448874 SLC27A3Q5K4L6 730 aa23.11■■□□□ 1.29
PTMA-208ENST00000448874 QSER1Q2KHR3 1735 aa23.1■■□□□ 1.29
PTMA-208ENST00000448874 DCAF8L1A6NGE4 600 aa23.09■■□□□ 1.29
PTMA-208ENST00000448874 TATP17735 454 aaPredicted RBP23.09■■□□□ 1.29
PTMA-208ENST00000448874 EMILIN1Q9Y6C2 1016 aa23.09■■□□□ 1.29
PTMA-208ENST00000448874 ANKRD26Q9UPS8 1709 aa23.08■■□□□ 1.29
PTMA-208ENST00000448874 TUBGCP6Q96RT7 1819 aa23.08■■□□□ 1.29
PTMA-208ENST00000448874 AKT1S1Q96B36 256 aa23.08■■□□□ 1.29
PTMA-208ENST00000448874 SGIP1Q9BQI5 828 aa23.08■■□□□ 1.29
PTMA-208ENST00000448874 POLR3GLQ9BT43 218 aa23.07■■□□□ 1.28
PTMA-208ENST00000448874 YY1P25490 414 aa23.06■■□□□ 1.28
PTMA-208ENST00000448874 KCNQ4P56696 695 aa23.06■■□□□ 1.28
PTMA-208ENST00000448874 FHDC1Q9C0D6 1143 aaPredicted RBP23.05■■□□□ 1.28
PTMA-208ENST00000448874 PCDH11XQ9BZA7 1347 aa23.05■■□□□ 1.28
PTMA-208ENST00000448874 PCDH11YQ9BZA8 1340 aa23.05■■□□□ 1.28
PTMA-208ENST00000448874 MAP2P11137 1827 aaKnown RBP23.04■■□□□ 1.28
PTMA-208ENST00000448874 PKD1L3Q7Z443 1732 aa23.03■■□□□ 1.28
PTMA-208ENST00000448874 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
PTMA-208ENST00000448874 CCNL1Q9UK58 526 aaPredicted RBP23.03■■□□□ 1.28
PTMA-208ENST00000448874 PNPLA7Q6ZV29 1317 aa23.03■■□□□ 1.28
PTMA-208ENST00000448874 ARXQ96QS3 562 aa23.02■■□□□ 1.28
PTMA-208ENST00000448874 SYT17Q9BSW7 474 aa23.02■■□□□ 1.28
PTMA-208ENST00000448874 NCAPD2Q15021 1401 aa23.01■■□□□ 1.27
PTMA-208ENST00000448874 TFCP2L1Q9NZI6 479 aa23.01■■□□□ 1.27
PTMA-208ENST00000448874 TOGARAM1Q9Y4F4 1720 aa23.01■■□□□ 1.27
PTMA-208ENST00000448874 COL24A1Q17RW2 1714 aa22.99■■□□□ 1.27
PTMA-208ENST00000448874 CYP27B1O15528 508 aa22.99■■□□□ 1.27
PTMA-208ENST00000448874 EIF4G2P78344 907 aaKnown RBP eCLIP22.99■■□□□ 1.273e-37■□□□□ 9.8
PTMA-208ENST00000448874 SLC16A10Q8TF71 515 aa22.99■■□□□ 1.27
PTMA-208ENST00000448874 WASHC2AQ641Q2 1341 aa22.99■■□□□ 1.27
PTMA-208ENST00000448874 HSPA5P11021 654 aaKnown RBP22.98■■□□□ 1.27
PTMA-208ENST00000448874 ITGB4P16144 1822 aa22.98■■□□□ 1.27
PTMA-208ENST00000448874 C5P01031 1676 aa22.97■■□□□ 1.27
PTMA-208ENST00000448874 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
PTMA-208ENST00000448874 MAP3K5Q99683 1374 aa22.97■■□□□ 1.27
PTMA-208ENST00000448874 POLKQ9UBT6 870 aa22.96■■□□□ 1.27
PTMA-208ENST00000448874 MPRIPQ6WCQ1 1025 aa22.95■■□□□ 1.26
PTMA-208ENST00000448874 PALLDQ8WX93 1383 aa22.95■■□□□ 1.26
PTMA-208ENST00000448874 POLD1P28340 1107 aa22.94■■□□□ 1.26
PTMA-208ENST00000448874 TNNT2P45379 298 aaPredicted RBP22.94■■□□□ 1.26
PTMA-208ENST00000448874 EYA1Q99502 592 aa22.94■■□□□ 1.26
PTMA-208ENST00000448874 TAF1LQ8IZX4 1826 aa22.94■■□□□ 1.26
PTMA-208ENST00000448874 SPG7Q9UQ90 795 aa22.92■■□□□ 1.26
PTMA-208ENST00000448874 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
PTMA-208ENST00000448874 PANK3Q9H999 370 aa22.91■■□□□ 1.26
PTMA-208ENST00000448874 MSH5O43196 834 aa22.9■■□□□ 1.26
PTMA-208ENST00000448874 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
PTMA-208ENST00000448874 UTRNP46939 3433 aa22.89■■□□□ 1.25
PTMA-208ENST00000448874 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.25
PTMA-208ENST00000448874 COL23A1Q86Y22 540 aaPredicted RBP22.89■■□□□ 1.25
PTMA-208ENST00000448874 PIGBQ92521 554 aa22.88■■□□□ 1.25
PTMA-208ENST00000448874 SMARCC1Q92922 1105 aaPredicted RBP22.88■■□□□ 1.25
PTMA-208ENST00000448874 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.88■■□□□ 1.255e-13■■□□□ 14.1
PTMA-208ENST00000448874 C4BP0C0L5 1744 aa22.88■■□□□ 1.25
PTMA-208ENST00000448874 CHD4Q14839 1912 aa22.87■■□□□ 1.25
PTMA-208ENST00000448874 HMGB2P26583 209 aaKnown RBP22.85■■□□□ 1.25
PTMA-208ENST00000448874 PHKG2P15735 406 aa22.84■■□□□ 1.25
PTMA-208ENST00000448874 MSL1Q68DK7 614 aa22.84■■□□□ 1.25
PTMA-208ENST00000448874 IFNL2Q8IZJ0 200 aa22.84■■□□□ 1.25
PTMA-208ENST00000448874 IGSF1Q8N6C5 1336 aa22.83■■□□□ 1.25
PTMA-208ENST00000448874 TMOD3Q9NYL9 352 aa22.83■■□□□ 1.25
PTMA-208ENST00000448874 UBR3Q6ZT12 1888 aa22.82■■□□□ 1.24
PTMA-208ENST00000448874 PLEKHG2Q9H7P9 1386 aa22.82■■□□□ 1.24
PTMA-208ENST00000448874 GPR162Q16538 588 aa22.82■■□□□ 1.24
PTMA-208ENST00000448874 FLAD1Q8NFF5 587 aa22.82■■□□□ 1.24
PTMA-208ENST00000448874 NLGN2Q8NFZ4 835 aa22.82■■□□□ 1.24
PTMA-208ENST00000448874 AK7Q96M32 723 aa22.82■■□□□ 1.24
PTMA-208ENST00000448874 MORC1Q86VD1 984 aa22.81■■□□□ 1.24
PTMA-208ENST00000448874 LOC102724428A0A0B4J2F2 783 aa22.79■■□□□ 1.24
PTMA-208ENST00000448874 SIK1P57059 783 aa22.79■■□□□ 1.24
PTMA-208ENST00000448874 PELP1Q8IZL8 1130 aaKnown RBP22.79■■□□□ 1.24
PTMA-208ENST00000448874 ZNF784Q8NCA9 323 aaPredicted RBP22.79■■□□□ 1.24
PTMA-208ENST00000448874 ASAP1Q9ULH1 1129 aa22.79■■□□□ 1.24
PTMA-208ENST00000448874 AMIGO3Q86WK7 504 aa22.78■■□□□ 1.24
PTMA-208ENST00000448874 PHF14O94880 888 aa22.77■■□□□ 1.24
PTMA-208ENST00000448874 LINC00116Q8NCU8 138 aa22.77■■□□□ 1.24
PTMA-208ENST00000448874 KNSTRNQ9Y448 316 aa22.77■■□□□ 1.24
PTMA-208ENST00000448874 SMIM5Q71RC9 77 aa22.76■■□□□ 1.23
PTMA-208ENST00000448874 ATG3Q9NT62 314 aa22.75■■□□□ 1.23
PTMA-208ENST00000448874 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.74■■□□□ 1.23
PTMA-208ENST00000448874 ATP6V1AP38606 617 aa22.74■■□□□ 1.23
PTMA-208ENST00000448874 ITPK1Q13572 414 aa22.74■■□□□ 1.23
PTMA-208ENST00000448874 PLEKHO1Q53GL0 409 aaPredicted RBP22.74■■□□□ 1.23
PTMA-208ENST00000448874 HSP90AB1P08238 724 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms