RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 ZMYND15Q9H091 742 aa12.11□□□□□ -0.47
ATP13A3-204ENST00000446356 SPINT1O43278 529 aa12.1□□□□□ -0.47
ATP13A3-204ENST00000446356 MAN1A2O60476 641 aa12.1□□□□□ -0.47
ATP13A3-204ENST00000446356 SNRPBP14678 240 aaKnown RBP12.1□□□□□ -0.47
ATP13A3-204ENST00000446356 PTGIRP43119 386 aa12.1□□□□□ -0.47
ATP13A3-204ENST00000446356 ADAMTS19Q8TE59 1207 aa12.1□□□□□ -0.47
ATP13A3-204ENST00000446356 CHIC2Q9UKJ5 165 aa12.1□□□□□ -0.47
ATP13A3-204ENST00000446356 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
ATP13A3-204ENST00000446356 ZNF395Q9H8N7 513 aaPredicted RBP12.09□□□□□ -0.47
ATP13A3-204ENST00000446356 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
ATP13A3-204ENST00000446356 TTLL8A6PVC2 850 aa12.07□□□□□ -0.48
ATP13A3-204ENST00000446356 EML3Q32P44 896 aa12.07□□□□□ -0.48
ATP13A3-204ENST00000446356 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
ATP13A3-204ENST00000446356 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
ATP13A3-204ENST00000446356 INSM2Q96T92 566 aaPredicted RBP12.07□□□□□ -0.48
ATP13A3-204ENST00000446356 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
ATP13A3-204ENST00000446356 LZTS3O60299 673 aaPredicted RBP12.06□□□□□ -0.48
ATP13A3-204ENST00000446356 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
ATP13A3-204ENST00000446356 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
ATP13A3-204ENST00000446356 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
ATP13A3-204ENST00000446356 MEN1O00255 615 aa12.05□□□□□ -0.48
ATP13A3-204ENST00000446356 ZNF777Q9ULD5 760 aaPredicted RBP12.05□□□□□ -0.48
ATP13A3-204ENST00000446356 GNRH1P01148 92 aa12.04□□□□□ -0.48
ATP13A3-204ENST00000446356 NLRP3Q96P20 1036 aa12.04□□□□□ -0.48
ATP13A3-204ENST00000446356 ARHGEF10LQ9HCE6 1279 aa12.04□□□□□ -0.48
ATP13A3-204ENST00000446356 KDF1Q8NAX2 398 aaPredicted RBP12.03□□□□□ -0.48
ATP13A3-204ENST00000446356 NOD1Q9Y239 953 aa12.03□□□□□ -0.48
ATP13A3-204ENST00000446356 A0A1W2PRU2 124 aa12.02□□□□□ -0.49
ATP13A3-204ENST00000446356 ATP9BO43861 1147 aa12.02□□□□□ -0.49
ATP13A3-204ENST00000446356 CTSOP43234 321 aaPredicted RBP12.02□□□□□ -0.49
ATP13A3-204ENST00000446356 NCOA4Q13772 614 aa12.02□□□□□ -0.49
ATP13A3-204ENST00000446356 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.02□□□□□ -0.494e-9■■■□□ 17.9
ATP13A3-204ENST00000446356 ESCO1Q5FWF5 840 aa12.02□□□□□ -0.49
ATP13A3-204ENST00000446356 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
ATP13A3-204ENST00000446356 UCN2Q96RP3 112 aa12.02□□□□□ -0.49
ATP13A3-204ENST00000446356 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
ATP13A3-204ENST00000446356 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
ATP13A3-204ENST00000446356 USP17L3A6NCW0 530 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 USP17L4A6NCW7 530 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 SOBPA7XYQ1 873 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 CLN3Q13286 438 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 USP17L2Q6R6M4 530 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 DEPDC4Q8N2C3 294 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
ATP13A3-204ENST00000446356 FIGNL2A6NMB9 653 aa11.99□□□□□ -0.49
ATP13A3-204ENST00000446356 PLEKHM2Q8IWE5 1019 aa11.99□□□□□ -0.49
ATP13A3-204ENST00000446356 GPC1P35052 558 aa11.98□□□□□ -0.49
ATP13A3-204ENST00000446356 PSME1Q06323 249 aa11.98□□□□□ -0.49
ATP13A3-204ENST00000446356 SLC27A3Q5K4L6 730 aa11.98□□□□□ -0.49
ATP13A3-204ENST00000446356 TRIM50Q86XT4 487 aa11.98□□□□□ -0.49
ATP13A3-204ENST00000446356 RNF217Q8TC41 542 aa11.98□□□□□ -0.49
ATP13A3-204ENST00000446356 GTF2E1P29083 439 aaPredicted RBP11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 RNF144AP50876 292 aaPredicted RBP11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 GTF2IP78347 998 aa11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 LYSMD3Q7Z3D4 306 aa11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 CNKSR1Q969H4 720 aa11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 PPP1R12CQ9BZL4 782 aa11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 TFIP11Q9UBB9 837 aaKnown RBP11.96□□□□□ -0.49
ATP13A3-204ENST00000446356 PALM3A6NDB9 673 aaPredicted RBP11.95□□□□□ -0.5
ATP13A3-204ENST00000446356 ATP1A2P50993 1020 aa11.95□□□□□ -0.5
ATP13A3-204ENST00000446356 ESYT1Q9BSJ8 1104 aa11.95□□□□□ -0.5
ATP13A3-204ENST00000446356 MAFBQ9Y5Q3 323 aaPredicted RBP11.94□□□□□ -0.5
ATP13A3-204ENST00000446356 IL2RAP01589 272 aa11.93□□□□□ -0.5
ATP13A3-204ENST00000446356 GDF10P55107 478 aa11.93□□□□□ -0.5
ATP13A3-204ENST00000446356 ETNK1Q9HBU6 452 aa11.93□□□□□ -0.5
ATP13A3-204ENST00000446356 NXF1Q9UBU9 619 aaKnown RBP11.93□□□□□ -0.5
ATP13A3-204ENST00000446356 PRICKLE2Q7Z3G6 844 aa11.92□□□□□ -0.5
ATP13A3-204ENST00000446356 XAGE2Q96GT9 111 aa11.91□□□□□ -0.5
ATP13A3-204ENST00000446356 MKRN1Q9UHC7 482 aaKnown RBP11.91□□□□□ -0.5
ATP13A3-204ENST00000446356 PCDHGA11Q9Y5H2 935 aa11.91□□□□□ -0.5
ATP13A3-204ENST00000446356 INHAP05111 366 aa11.9□□□□□ -0.5
ATP13A3-204ENST00000446356 PTSQ03393 145 aa11.9□□□□□ -0.5
ATP13A3-204ENST00000446356 TLR1Q15399 786 aa11.9□□□□□ -0.5
ATP13A3-204ENST00000446356 NPAS3Q8IXF0 933 aa11.9□□□□□ -0.5
ATP13A3-204ENST00000446356 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
ATP13A3-204ENST00000446356 CCDC97Q96F63 343 aaPredicted RBP11.9□□□□□ -0.5
ATP13A3-204ENST00000446356 RBM19Q9Y4C8 960 aaKnown RBP11.9□□□□□ -0.5
ATP13A3-204ENST00000446356 STAU1O95793 577 aaKnown RBP11.89□□□□□ -0.51
ATP13A3-204ENST00000446356 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
ATP13A3-204ENST00000446356 SCNN1DP51172 638 aa11.89□□□□□ -0.51
ATP13A3-204ENST00000446356 CENPCQ03188 943 aa11.89□□□□□ -0.51
ATP13A3-204ENST00000446356 ZSCAN10Q96SZ4 725 aaPredicted RBP11.89□□□□□ -0.51
ATP13A3-204ENST00000446356 WASLO00401 505 aaPredicted RBP11.88□□□□□ -0.51
ATP13A3-204ENST00000446356 TERTO14746 1132 aaKnown RBP11.88□□□□□ -0.51
ATP13A3-204ENST00000446356 BACH1O14867 736 aa11.88□□□□□ -0.51
ATP13A3-204ENST00000446356 TMEM214Q6NUQ4 689 aaKnown RBP11.88□□□□□ -0.51
ATP13A3-204ENST00000446356 OGFOD1Q8N543 542 aa11.88□□□□□ -0.51
ATP13A3-204ENST00000446356 GRIP2Q9C0E4 1043 aa11.88□□□□□ -0.51
ATP13A3-204ENST00000446356 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
ATP13A3-204ENST00000446356 GNASQ5JWF2 1037 aa11.87□□□□□ -0.51
ATP13A3-204ENST00000446356 RHOQP17081 205 aa11.86□□□□□ -0.51
ATP13A3-204ENST00000446356 RASA1P20936 1047 aa11.86□□□□□ -0.51
ATP13A3-204ENST00000446356 LARP1Q6PKG0 1096 aaKnown RBP11.86□□□□□ -0.51
ATP13A3-204ENST00000446356 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
ATP13A3-204ENST00000446356 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
ATP13A3-204ENST00000446356 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
ATP13A3-204ENST00000446356 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
ATP13A3-204ENST00000446356 TAS1R3Q7RTX0 852 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms