RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 REC8O95072 547 aa16.97■□□□□ 0.31
VPS52-212ENST00000445902 BRPF1P55201 1214 aaPredicted RBP16.97■□□□□ 0.31
VPS52-212ENST00000445902 ATP7AQ04656 1500 aa16.97■□□□□ 0.31
VPS52-212ENST00000445902 ADCY5O95622 1261 aa16.97■□□□□ 0.31
VPS52-212ENST00000445902 KIF3AQ9Y496 699 aa16.97■□□□□ 0.31
VPS52-212ENST00000445902 ERC2O15083 957 aa16.96■□□□□ 0.31
VPS52-212ENST00000445902 BRD1O95696 1058 aa16.96■□□□□ 0.31
VPS52-212ENST00000445902 NEURL4Q96JN8 1562 aa16.96■□□□□ 0.31
VPS52-212ENST00000445902 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
VPS52-212ENST00000445902 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
VPS52-212ENST00000445902 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
VPS52-212ENST00000445902 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
VPS52-212ENST00000445902 MROH1Q8NDA8 1641 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 FAM83GA6ND36 823 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
VPS52-212ENST00000445902 SYAP1Q96A49 352 aaPredicted RBP16.95■□□□□ 0.3
VPS52-212ENST00000445902 PPLO60437 1756 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 FCHSD2O94868 740 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 USP48Q86UV5 1035 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 EFCAB6Q5THR3 1501 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 GLI2P10070 1586 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
VPS52-212ENST00000445902 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
VPS52-212ENST00000445902 HMGN5P82970 282 aaKnown RBP16.94■□□□□ 0.3
VPS52-212ENST00000445902 API5Q9BZZ5 524 aaKnown RBP16.94■□□□□ 0.3
VPS52-212ENST00000445902 ADGRB3O60242 1522 aa16.94■□□□□ 0.3
VPS52-212ENST00000445902 NFE2L2Q16236 605 aa16.94■□□□□ 0.3
VPS52-212ENST00000445902 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
VPS52-212ENST00000445902 GNAI1P63096 354 aa16.93■□□□□ 0.3
VPS52-212ENST00000445902 ARHGEF28Q8N1W1 1705 aaKnown RBP16.93■□□□□ 0.3
VPS52-212ENST00000445902 U2AF2P26368 475 aaKnown RBP eCLIP16.93■□□□□ 0.31e-8■■■□□ 17.8
VPS52-212ENST00000445902 ZCCHC11Q5TAX3 1644 aaKnown RBP16.92■□□□□ 0.3
VPS52-212ENST00000445902 CEP85Q6P2H3 762 aa16.92■□□□□ 0.3
VPS52-212ENST00000445902 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
VPS52-212ENST00000445902 ANKRD44Q8N8A2 993 aa16.92■□□□□ 0.3
VPS52-212ENST00000445902 DTNBO60941 627 aa16.92■□□□□ 0.3
VPS52-212ENST00000445902 GGT6Q6P531 493 aa16.91■□□□□ 0.3
VPS52-212ENST00000445902 CAMSAP1Q5T5Y3 1602 aa16.91■□□□□ 0.3
VPS52-212ENST00000445902 PHF14O94880 888 aa16.91■□□□□ 0.3
VPS52-212ENST00000445902 GTF2F1P35269 517 aaKnown RBP eCLIP16.91■□□□□ 0.3
VPS52-212ENST00000445902 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
VPS52-212ENST00000445902 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
VPS52-212ENST00000445902 SPC24Q8NBT2 197 aa16.9■□□□□ 0.3
VPS52-212ENST00000445902 MEIS3Q99687 375 aa16.9■□□□□ 0.3
VPS52-212ENST00000445902 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
VPS52-212ENST00000445902 ATP10DQ9P241 1426 aa16.9■□□□□ 0.3
VPS52-212ENST00000445902 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
VPS52-212ENST00000445902 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.3
VPS52-212ENST00000445902 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.3
VPS52-212ENST00000445902 ANO2Q9NQ90 1003 aa16.89■□□□□ 0.3
VPS52-212ENST00000445902 CNPY2Q9Y2B0 182 aa16.89■□□□□ 0.3
VPS52-212ENST00000445902 GTPBP4Q9BZE4 634 aaKnown RBP16.89■□□□□ 0.29
VPS52-212ENST00000445902 PYCARDQ9ULZ3 195 aa16.89■□□□□ 0.29
VPS52-212ENST00000445902 MSH6P52701 1360 aa16.89■□□□□ 0.29
VPS52-212ENST00000445902 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
VPS52-212ENST00000445902 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
VPS52-212ENST00000445902 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
VPS52-212ENST00000445902 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
VPS52-212ENST00000445902 EMILIN1Q9Y6C2 1016 aa16.87■□□□□ 0.29
VPS52-212ENST00000445902 CHD1O14646 1710 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 PDE1AP54750 535 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 CUL4AQ13619 759 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 FAM184AQ8NB25 1140 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 SRCIN1Q9C0H9 1055 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 ANKRD26Q9UPS8 1709 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 DLG5Q8TDM6 1919 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 AP5Z1O43299 807 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 FGD1P98174 961 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 KCNF1Q9H3M0 494 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 SPTLC3Q9NUV7 552 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 CCDC183Q5T5S1 534 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
VPS52-212ENST00000445902 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
VPS52-212ENST00000445902 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
VPS52-212ENST00000445902 FIBPO43427 364 aa16.85■□□□□ 0.29
VPS52-212ENST00000445902 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
VPS52-212ENST00000445902 PUS7Q96PZ0 661 aaKnown RBP16.85■□□□□ 0.29
VPS52-212ENST00000445902 RTL1A6NKG5 1358 aa16.85■□□□□ 0.29
VPS52-212ENST00000445902 FANCAO15360 1455 aa16.85■□□□□ 0.29
VPS52-212ENST00000445902 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
VPS52-212ENST00000445902 NPATQ14207 1427 aa16.85■□□□□ 0.29
VPS52-212ENST00000445902 MAP2P11137 1827 aaKnown RBP16.85■□□□□ 0.29
VPS52-212ENST00000445902 KDM4AO75164 1064 aa16.84■□□□□ 0.29
VPS52-212ENST00000445902 LETM1O95202 739 aaPredicted RBP16.84■□□□□ 0.29
VPS52-212ENST00000445902 KIF20AO95235 890 aa16.84■□□□□ 0.29
VPS52-212ENST00000445902 CHAF1AQ13111 956 aaPredicted RBP16.84■□□□□ 0.29
VPS52-212ENST00000445902 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
VPS52-212ENST00000445902 PRAM1Q96QH2 718 aa16.84■□□□□ 0.29
VPS52-212ENST00000445902 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
VPS52-212ENST00000445902 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.84■□□□□ 0.29
VPS52-212ENST00000445902 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
VPS52-212ENST00000445902 MCM2P49736 904 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms