RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 DOT1LQ8TEK3 1739 aa19.93■□□□□ 0.78
SHANK2-209ENST00000445654 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
SHANK2-209ENST00000445654 USP47Q96K76 1375 aa19.92■□□□□ 0.78
SHANK2-209ENST00000445654 COL23A1Q86Y22 540 aaPredicted RBP19.91■□□□□ 0.78
SHANK2-209ENST00000445654 NME9Q86XW9 330 aa19.9■□□□□ 0.78
SHANK2-209ENST00000445654 IP6K1Q92551 441 aa19.9■□□□□ 0.78
SHANK2-209ENST00000445654 APLP1P51693 650 aa19.89■□□□□ 0.77
SHANK2-209ENST00000445654 KCNQ4P56696 695 aa19.89■□□□□ 0.77
SHANK2-209ENST00000445654 ZNF526Q8TF50 670 aaPredicted RBP19.89■□□□□ 0.77
SHANK2-209ENST00000445654 EDC4Q6P2E9 1401 aaKnown RBP19.88■□□□□ 0.77
SHANK2-209ENST00000445654 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
SHANK2-209ENST00000445654 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
SHANK2-209ENST00000445654 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
SHANK2-209ENST00000445654 NSD2O96028 1365 aa19.87■□□□□ 0.77
SHANK2-209ENST00000445654 MSL1Q68DK7 614 aa19.86■□□□□ 0.77
SHANK2-209ENST00000445654 TERF2IPQ9NYB0 399 aa19.86■□□□□ 0.77
SHANK2-209ENST00000445654 CGNL1Q0VF96 1302 aa19.85■□□□□ 0.77
SHANK2-209ENST00000445654 NSD3Q9BZ95 1437 aa19.85■□□□□ 0.77
SHANK2-209ENST00000445654 C5P01031 1676 aa19.84■□□□□ 0.77
SHANK2-209ENST00000445654 TMC1Q8TDI8 760 aa19.83■□□□□ 0.77
SHANK2-209ENST00000445654 LTV1Q96GA3 475 aaPredicted RBP19.83■□□□□ 0.77
SHANK2-209ENST00000445654 CD163L1Q9NR16 1453 aa19.82■□□□□ 0.76
SHANK2-209ENST00000445654 L3MBTL2Q969R5 705 aa19.82■□□□□ 0.76
SHANK2-209ENST00000445654 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
SHANK2-209ENST00000445654 KIF3CO14782 793 aa19.81■□□□□ 0.76
SHANK2-209ENST00000445654 TOMM70O94826 608 aa19.79■□□□□ 0.76
SHANK2-209ENST00000445654 AMPHP49418 695 aa19.79■□□□□ 0.76
SHANK2-209ENST00000445654 AK7Q96M32 723 aa19.79■□□□□ 0.76
SHANK2-209ENST00000445654 RAPGEF4Q8WZA2 1011 aa19.78■□□□□ 0.76
SHANK2-209ENST00000445654 SMARCC1Q92922 1105 aaPredicted RBP19.78■□□□□ 0.76
SHANK2-209ENST00000445654 COG3Q96JB2 828 aa19.78■□□□□ 0.76
SHANK2-209ENST00000445654 PUS7Q96PZ0 661 aaKnown RBP19.78■□□□□ 0.76
SHANK2-209ENST00000445654 TAF1LQ8IZX4 1826 aa19.78■□□□□ 0.76
SHANK2-209ENST00000445654 HOXC9P31274 260 aa19.77■□□□□ 0.76
SHANK2-209ENST00000445654 RTL1A6NKG5 1358 aa19.77■□□□□ 0.76
SHANK2-209ENST00000445654 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
SHANK2-209ENST00000445654 MEGF6O75095 1541 aa19.76■□□□□ 0.75
SHANK2-209ENST00000445654 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-209ENST00000445654 PALLDQ8WX93 1383 aa19.76■□□□□ 0.75
SHANK2-209ENST00000445654 A0A1W2PP64 1363 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 SLC12A5Q9H2X9 1139 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 C4BP0C0L5 1744 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 MAP3K19Q56UN5 1328 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
SHANK2-209ENST00000445654 SSFA2P28290 1259 aa19.73■□□□□ 0.75
SHANK2-209ENST00000445654 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
SHANK2-209ENST00000445654 RGPD2P0DJD1 1756 aa19.72■□□□□ 0.75
SHANK2-209ENST00000445654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.7■□□□□ 0.74
SHANK2-209ENST00000445654 MPRIPQ6WCQ1 1025 aa19.7■□□□□ 0.74
SHANK2-209ENST00000445654 UBR3Q6ZT12 1888 aa19.7■□□□□ 0.74
SHANK2-209ENST00000445654 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
SHANK2-209ENST00000445654 C16orf71Q8IYS4 520 aaPredicted RBP19.69■□□□□ 0.74
SHANK2-209ENST00000445654 WDR90Q96KV7 1748 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 PHF14O94880 888 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 TGFB2P61812 414 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 NBPF6Q5VWK0 638 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 RBM46Q8TBY0 533 aaKnown RBP19.68■□□□□ 0.74
SHANK2-209ENST00000445654 NBPF4Q96M43 638 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 CARD11Q9BXL7 1154 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 WWC3Q9ULE0 1092 aa19.67■□□□□ 0.74
SHANK2-209ENST00000445654 TOGARAM1Q9Y4F4 1720 aa19.67■□□□□ 0.74
SHANK2-209ENST00000445654 FSTL1Q12841 308 aa19.66■□□□□ 0.74
SHANK2-209ENST00000445654 KLRG1Q96E93 195 aa19.66■□□□□ 0.74
SHANK2-209ENST00000445654 PLEKHG2Q9H7P9 1386 aa19.66■□□□□ 0.74
SHANK2-209ENST00000445654 JMYQ8N9B5 988 aa19.65■□□□□ 0.74
SHANK2-209ENST00000445654 ITGB4P16144 1822 aa19.64■□□□□ 0.73
SHANK2-209ENST00000445654 KIF13BQ9NQT8 1826 aa19.64■□□□□ 0.73
SHANK2-209ENST00000445654 KIF24Q5T7B8 1368 aa19.63■□□□□ 0.73
SHANK2-209ENST00000445654 USHBP1Q8N6Y0 703 aa19.63■□□□□ 0.73
SHANK2-209ENST00000445654 BCS1LQ9Y276 419 aa19.63■□□□□ 0.73
SHANK2-209ENST00000445654 PXDNLA1KZ92 1463 aa19.62■□□□□ 0.73
SHANK2-209ENST00000445654 INSRP06213 1382 aa19.62■□□□□ 0.73
SHANK2-209ENST00000445654 ARHGAP27Q6ZUM4 889 aa19.62■□□□□ 0.73
SHANK2-209ENST00000445654 LOC102724428A0A0B4J2F2 783 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 SIK1P57059 783 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 TNS4Q8IZW8 715 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 NLGN1Q8N2Q7 840 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 KDM2BQ8NHM5 1336 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 GNPATO15228 680 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 CYP27B1O15528 508 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 MMP10P09238 476 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 NEUROD1Q13562 356 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 COL13A1Q5TAT6 717 aaPredicted RBP19.6■□□□□ 0.73
SHANK2-209ENST00000445654 NMRK2Q9NPI5 230 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 FLT4P35916 1363 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 PRELPP51888 382 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 PIGBQ92521 554 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 SIN3AQ96ST3 1273 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 CCDC87Q9NVE4 849 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 PKD1L3Q7Z443 1732 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 MAP2P11137 1827 aaKnown RBP19.58■□□□□ 0.73
SHANK2-209ENST00000445654 FCHSD2O94868 740 aa19.58■□□□□ 0.72
SHANK2-209ENST00000445654 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.72
SHANK2-209ENST00000445654 NKX1-1Q15270 411 aaPredicted RBP19.58■□□□□ 0.72
SHANK2-209ENST00000445654 KIAA1551Q9HCM1 1747 aa19.57■□□□□ 0.72
SHANK2-209ENST00000445654 FBLN1P23142 703 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms