RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 DDX54Q8TDD1 881 aaKnown RBP25.82■■□□□ 1.72
ATPAF2-201ENST00000444058 MAP2P11137 1827 aaKnown RBP25.81■■□□□ 1.72
ATPAF2-201ENST00000444058 NCAPD2Q15021 1401 aa25.8■■□□□ 1.72
ATPAF2-201ENST00000444058 USHBP1Q8N6Y0 703 aa25.8■■□□□ 1.72
ATPAF2-201ENST00000444058 TATP17735 454 aaPredicted RBP25.79■■□□□ 1.72
ATPAF2-201ENST00000444058 PROM2Q8N271 834 aa25.79■■□□□ 1.72
ATPAF2-201ENST00000444058 ACSBG1Q96GR2 724 aa25.79■■□□□ 1.72
ATPAF2-201ENST00000444058 TNNT2P45379 298 aaPredicted RBP25.78■■□□□ 1.72
ATPAF2-201ENST00000444058 MORC1Q86VD1 984 aa25.77■■□□□ 1.72
ATPAF2-201ENST00000444058 TXNRD1Q16881 649 aa25.76■■□□□ 1.71
ATPAF2-201ENST00000444058 AMER1Q5JTC6 1135 aaPredicted RBP25.76■■□□□ 1.71
ATPAF2-201ENST00000444058 LRP5O75197 1615 aa25.76■■□□□ 1.71
ATPAF2-201ENST00000444058 SHANK3Q9BYB0 1731 aa25.74■■□□□ 1.71
ATPAF2-201ENST00000444058 PCDH11XQ9BZA7 1347 aa25.74■■□□□ 1.71
ATPAF2-201ENST00000444058 PCDH11YQ9BZA8 1340 aa25.74■■□□□ 1.71
ATPAF2-201ENST00000444058 PER1O15534 1290 aaPredicted RBP25.74■■□□□ 1.71
ATPAF2-201ENST00000444058 EYA1Q99502 592 aa25.74■■□□□ 1.71
ATPAF2-201ENST00000444058 PLEKHG2Q9H7P9 1386 aa25.72■■□□□ 1.71
ATPAF2-201ENST00000444058 EIF4A2Q14240 407 aaKnown RBP25.72■■□□□ 1.71
ATPAF2-201ENST00000444058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.71■■□□□ 1.71
ATPAF2-201ENST00000444058 PRIM1P49642 420 aaKnown RBP25.7■■□□□ 1.7
ATPAF2-201ENST00000444058 BTAF1O14981 1849 aa25.7■■□□□ 1.7
ATPAF2-201ENST00000444058 ANO8Q9HCE9 1232 aaPredicted RBP25.68■■□□□ 1.7
ATPAF2-201ENST00000444058 SYTL4Q96C24 671 aaPredicted RBP25.67■■□□□ 1.7
ATPAF2-201ENST00000444058 SPG7Q9UQ90 795 aa25.67■■□□□ 1.7
ATPAF2-201ENST00000444058 NPC1L1Q9UHC9 1359 aa25.67■■□□□ 1.7
ATPAF2-201ENST00000444058 IGSF1Q8N6C5 1336 aa25.66■■□□□ 1.7
ATPAF2-201ENST00000444058 CYP27B1O15528 508 aa25.66■■□□□ 1.7
ATPAF2-201ENST00000444058 SLC27A3Q5K4L6 730 aa25.66■■□□□ 1.7
ATPAF2-201ENST00000444058 KAT6BQ8WYB5 2073 aa25.66■■□□□ 1.7
ATPAF2-201ENST00000444058 PKD1L3Q7Z443 1732 aa25.66■■□□□ 1.7
ATPAF2-201ENST00000444058 STK32BQ9NY57 414 aa25.65■■□□□ 1.7
ATPAF2-201ENST00000444058 DOT1LQ8TEK3 1739 aa25.65■■□□□ 1.7
ATPAF2-201ENST00000444058 NKX1-1Q15270 411 aaPredicted RBP25.64■■□□□ 1.7
ATPAF2-201ENST00000444058 SLC15A2Q16348 729 aa25.64■■□□□ 1.7
ATPAF2-201ENST00000444058 PAPPAQ13219 1627 aa25.59■■□□□ 1.69
ATPAF2-201ENST00000444058 SPON1Q9HCB6 807 aa25.59■■□□□ 1.69
ATPAF2-201ENST00000444058 LRRC4BQ9NT99 713 aa25.59■■□□□ 1.69
ATPAF2-201ENST00000444058 CC2D1BQ5T0F9 858 aaKnown RBP25.58■■□□□ 1.69
ATPAF2-201ENST00000444058 IFNL2Q8IZJ0 200 aa25.58■■□□□ 1.69
ATPAF2-201ENST00000444058 IL13P35225 146 aa25.57■■□□□ 1.68
ATPAF2-201ENST00000444058 MTHFSP49914 203 aa25.57■■□□□ 1.68
ATPAF2-201ENST00000444058 HMGB2P26583 209 aaKnown RBP25.56■■□□□ 1.68
ATPAF2-201ENST00000444058 CASZ1Q86V15 1759 aa25.56■■□□□ 1.68
ATPAF2-201ENST00000444058 LY75O60449 1722 aa25.55■■□□□ 1.68
ATPAF2-201ENST00000444058 PHKG2P15735 406 aa25.55■■□□□ 1.68
ATPAF2-201ENST00000444058 KDRP35968 1356 aa25.55■■□□□ 1.68
ATPAF2-201ENST00000444058 AMOTQ4VCS5 1084 aa25.54■■□□□ 1.68
ATPAF2-201ENST00000444058 MPRIPQ6WCQ1 1025 aa25.54■■□□□ 1.68
ATPAF2-201ENST00000444058 PLEKHO1Q53GL0 409 aaPredicted RBP25.53■■□□□ 1.68
ATPAF2-201ENST00000444058 AKT1S1Q96B36 256 aa25.53■■□□□ 1.68
ATPAF2-201ENST00000444058 CCNL1Q9UK58 526 aaPredicted RBP25.52■■□□□ 1.68
ATPAF2-201ENST00000444058 HSP90AB1P08238 724 aaKnown RBP25.51■■□□□ 1.67
ATPAF2-201ENST00000444058 ZNF827Q17R98 1081 aa25.51■■□□□ 1.67
ATPAF2-201ENST00000444058 SMARCC1Q92922 1105 aaPredicted RBP25.51■■□□□ 1.67
ATPAF2-201ENST00000444058 PDGFDQ9GZP0 370 aaPredicted RBP25.51■■□□□ 1.67
ATPAF2-201ENST00000444058 TOGARAM1Q9Y4F4 1720 aa25.51■■□□□ 1.67
ATPAF2-201ENST00000444058 SULT6B1Q6IMI4 303 aa25.5■■□□□ 1.67
ATPAF2-201ENST00000444058 AEBP1Q8IUX7 1158 aa25.5■■□□□ 1.67
ATPAF2-201ENST00000444058 PALLDQ8WX93 1383 aa25.49■■□□□ 1.67
ATPAF2-201ENST00000444058 PIGBQ92521 554 aa25.49■■□□□ 1.67
ATPAF2-201ENST00000444058 DCAF5Q96JK2 942 aa25.48■■□□□ 1.67
ATPAF2-201ENST00000444058 MTFR1LQ9H019 292 aa25.48■■□□□ 1.67
ATPAF2-201ENST00000444058 ITGB4P16144 1822 aa25.47■■□□□ 1.67
ATPAF2-201ENST00000444058 TMOD3Q9NYL9 352 aa25.47■■□□□ 1.67
ATPAF2-201ENST00000444058 ERVV-2B6SEH9 535 aa25.46■■□□□ 1.67
ATPAF2-201ENST00000444058 DIAPH1O60610 1272 aaKnown RBP25.46■■□□□ 1.67
ATPAF2-201ENST00000444058 ZBTB7AO95365 584 aa25.46■■□□□ 1.67
ATPAF2-201ENST00000444058 KCNQ4P56696 695 aa25.46■■□□□ 1.67
ATPAF2-201ENST00000444058 ZNF530Q6P9A1 599 aaPredicted RBP25.44■■□□□ 1.66
ATPAF2-201ENST00000444058 SLC16A10Q8TF71 515 aa25.44■■□□□ 1.66
ATPAF2-201ENST00000444058 TFCP2L1Q9NZI6 479 aa25.44■■□□□ 1.66
ATPAF2-201ENST00000444058 PPP1R1BQ9UD71 204 aaPredicted RBP25.44■■□□□ 1.66
ATPAF2-201ENST00000444058 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
ATPAF2-201ENST00000444058 PTGER2P43116 358 aa25.43■■□□□ 1.66
ATPAF2-201ENST00000444058 C1orf141Q5JVX7 400 aa25.42■■□□□ 1.66
ATPAF2-201ENST00000444058 PNPLA7Q6ZV29 1317 aa25.41■■□□□ 1.66
ATPAF2-201ENST00000444058 COL3A1P02461 1466 aaPredicted RBP25.4■■□□□ 1.66
ATPAF2-201ENST00000444058 SGIP1Q9BQI5 828 aa25.4■■□□□ 1.66
ATPAF2-201ENST00000444058 ATF5Q9Y2D1 282 aaPredicted RBP25.4■■□□□ 1.66
ATPAF2-201ENST00000444058 KDM6AO15550 1401 aaPredicted RBP25.38■■□□□ 1.65
ATPAF2-201ENST00000444058 LOC102724428A0A0B4J2F2 783 aa25.38■■□□□ 1.65
ATPAF2-201ENST00000444058 SIK1P57059 783 aa25.38■■□□□ 1.65
ATPAF2-201ENST00000444058 CNGB1Q14028 1251 aaPredicted RBP25.38■■□□□ 1.65
ATPAF2-201ENST00000444058 ASAP1Q9ULH1 1129 aa25.38■■□□□ 1.65
ATPAF2-201ENST00000444058 C5P01031 1676 aa25.37■■□□□ 1.65
ATPAF2-201ENST00000444058 HMOX1P09601 288 aa25.37■■□□□ 1.65
ATPAF2-201ENST00000444058 ATG3Q9NT62 314 aa25.37■■□□□ 1.65
ATPAF2-201ENST00000444058 AKAP4Q5JQC9 854 aa25.36■■□□□ 1.65
ATPAF2-201ENST00000444058 CFAP53Q96M91 514 aa25.36■■□□□ 1.65
ATPAF2-201ENST00000444058 CABP4P57796 275 aa25.35■■□□□ 1.65
ATPAF2-201ENST00000444058 FLAD1Q8NFF5 587 aa25.35■■□□□ 1.65
ATPAF2-201ENST00000444058 TAF1LQ8IZX4 1826 aa25.33■■□□□ 1.65
ATPAF2-201ENST00000444058 PPP2R1AP30153 589 aa25.33■■□□□ 1.65
ATPAF2-201ENST00000444058 COL23A1Q86Y22 540 aaPredicted RBP25.32■■□□□ 1.64
ATPAF2-201ENST00000444058 TUBGCP6Q96RT7 1819 aa25.32■■□□□ 1.64
ATPAF2-201ENST00000444058 U2SURPO15042 1029 aaKnown RBP25.31■■□□□ 1.64
ATPAF2-201ENST00000444058 ATP6V1AP38606 617 aa25.31■■□□□ 1.64
ATPAF2-201ENST00000444058 C4BP0C0L5 1744 aa25.31■■□□□ 1.64
ATPAF2-201ENST00000444058 MTHFSDQ2M296 383 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms