RNA–Protein interactions for RNA: ENST00000442869.5

RCL1-206, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3 BASIC

Gene RCL1, Length 1,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-206ENST00000442869 BTAF1O14981 1849 aa17.39■□□□□ 0.37
RCL1-206ENST00000442869 RTL1A6NKG5 1358 aa17.39■□□□□ 0.37
RCL1-206ENST00000442869 SPON1Q9HCB6 807 aa17.39■□□□□ 0.37
RCL1-206ENST00000442869 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
RCL1-206ENST00000442869 POLR3GLQ9BT43 218 aa17.38■□□□□ 0.37
RCL1-206ENST00000442869 UTRNP46939 3433 aa17.38■□□□□ 0.37
RCL1-206ENST00000442869 USHBP1Q8N6Y0 703 aa17.37■□□□□ 0.37
RCL1-206ENST00000442869 ZCRB1Q8TBF4 217 aaKnown RBP17.37■□□□□ 0.37
RCL1-206ENST00000442869 SLC15A2Q16348 729 aa17.36■□□□□ 0.37
RCL1-206ENST00000442869 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.374e-9■□□□□ 9.5
RCL1-206ENST00000442869 STK32BQ9NY57 414 aa17.36■□□□□ 0.37
RCL1-206ENST00000442869 INSRP06213 1382 aa17.35■□□□□ 0.37
RCL1-206ENST00000442869 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
RCL1-206ENST00000442869 MEGF6O75095 1541 aa17.35■□□□□ 0.37
RCL1-206ENST00000442869 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
RCL1-206ENST00000442869 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
RCL1-206ENST00000442869 EMILIN1Q9Y6C2 1016 aa17.35■□□□□ 0.37
RCL1-206ENST00000442869 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
RCL1-206ENST00000442869 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
RCL1-206ENST00000442869 FLT4P35916 1363 aa17.34■□□□□ 0.37
RCL1-206ENST00000442869 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.37
RCL1-206ENST00000442869 ZBTB7AO95365 584 aa17.33■□□□□ 0.37
RCL1-206ENST00000442869 SYTL4Q96C24 671 aaPredicted RBP17.33■□□□□ 0.37
RCL1-206ENST00000442869 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.37
RCL1-206ENST00000442869 PPP1R1BQ9UD71 204 aaPredicted RBP17.33■□□□□ 0.37
RCL1-206ENST00000442869 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
RCL1-206ENST00000442869 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
RCL1-206ENST00000442869 KIF24Q5T7B8 1368 aa17.32■□□□□ 0.36
RCL1-206ENST00000442869 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
RCL1-206ENST00000442869 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
RCL1-206ENST00000442869 DOT1LQ8TEK3 1739 aa17.31■□□□□ 0.36
RCL1-206ENST00000442869 TATP17735 454 aaPredicted RBP17.3■□□□□ 0.36
RCL1-206ENST00000442869 PTGER2P43116 358 aa17.29■□□□□ 0.36
RCL1-206ENST00000442869 KCNQ4P56696 695 aa17.29■□□□□ 0.36
RCL1-206ENST00000442869 ZNF827Q17R98 1081 aa17.29■□□□□ 0.36
RCL1-206ENST00000442869 PANK3Q9H999 370 aa17.29■□□□□ 0.36
RCL1-206ENST00000442869 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
RCL1-206ENST00000442869 GOLGB1Q14789 3259 aaKnown RBP17.28■□□□□ 0.36
RCL1-206ENST00000442869 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
RCL1-206ENST00000442869 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
RCL1-206ENST00000442869 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
RCL1-206ENST00000442869 NSD2O96028 1365 aa17.27■□□□□ 0.36
RCL1-206ENST00000442869 SLC27A3Q5K4L6 730 aa17.27■□□□□ 0.36
RCL1-206ENST00000442869 ANKRD26Q9UPS8 1709 aa17.26■□□□□ 0.35
RCL1-206ENST00000442869 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
RCL1-206ENST00000442869 MTFR1LQ9H019 292 aa17.25■□□□□ 0.35
RCL1-206ENST00000442869 LY75O60449 1722 aa17.25■□□□□ 0.35
RCL1-206ENST00000442869 CYP27B1O15528 508 aa17.25■□□□□ 0.35
RCL1-206ENST00000442869 EYA1Q99502 592 aa17.25■□□□□ 0.35
RCL1-206ENST00000442869 PCDH11XQ9BZA7 1347 aa17.24■□□□□ 0.35
RCL1-206ENST00000442869 PCDH11YQ9BZA8 1340 aa17.24■□□□□ 0.35
RCL1-206ENST00000442869 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
RCL1-206ENST00000442869 SGIP1Q9BQI5 828 aa17.23■□□□□ 0.35
RCL1-206ENST00000442869 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
RCL1-206ENST00000442869 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.35
RCL1-206ENST00000442869 NCAPD2Q15021 1401 aa17.21■□□□□ 0.35
RCL1-206ENST00000442869 ITGB4P16144 1822 aa17.21■□□□□ 0.35
RCL1-206ENST00000442869 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
RCL1-206ENST00000442869 TFCP2L1Q9NZI6 479 aa17.21■□□□□ 0.35
RCL1-206ENST00000442869 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
RCL1-206ENST00000442869 TUBGCP6Q96RT7 1819 aa17.2■□□□□ 0.34
RCL1-206ENST00000442869 QSER1Q2KHR3 1735 aa17.2■□□□□ 0.34
RCL1-206ENST00000442869 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
RCL1-206ENST00000442869 FHDC1Q9C0D6 1143 aaPredicted RBP17.19■□□□□ 0.34
RCL1-206ENST00000442869 SPG7Q9UQ90 795 aa17.19■□□□□ 0.34
RCL1-206ENST00000442869 NKX1-1Q15270 411 aaPredicted RBP17.18■□□□□ 0.34
RCL1-206ENST00000442869 SYT17Q9BSW7 474 aa17.18■□□□□ 0.34
RCL1-206ENST00000442869 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
RCL1-206ENST00000442869 ARXQ96QS3 562 aa17.18■□□□□ 0.34
RCL1-206ENST00000442869 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
RCL1-206ENST00000442869 SLC16A10Q8TF71 515 aa17.17■□□□□ 0.34
RCL1-206ENST00000442869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■□□□ 12.9
RCL1-206ENST00000442869 PIGBQ92521 554 aa17.16■□□□□ 0.34
RCL1-206ENST00000442869 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
RCL1-206ENST00000442869 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
RCL1-206ENST00000442869 TAF1LQ8IZX4 1826 aa17.15■□□□□ 0.34
RCL1-206ENST00000442869 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
RCL1-206ENST00000442869 PHKG2P15735 406 aa17.14■□□□□ 0.33
RCL1-206ENST00000442869 COL23A1Q86Y22 540 aaPredicted RBP17.14■□□□□ 0.33
RCL1-206ENST00000442869 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
RCL1-206ENST00000442869 C5P01031 1676 aa17.13■□□□□ 0.33
RCL1-206ENST00000442869 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
RCL1-206ENST00000442869 YY1P25490 414 aa17.13■□□□□ 0.33
RCL1-206ENST00000442869 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
RCL1-206ENST00000442869 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
RCL1-206ENST00000442869 COL24A1Q17RW2 1714 aa17.12■□□□□ 0.33
RCL1-206ENST00000442869 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
RCL1-206ENST00000442869 POLD1P28340 1107 aa17.1■□□□□ 0.33
RCL1-206ENST00000442869 TMOD3Q9NYL9 352 aa17.1■□□□□ 0.33
RCL1-206ENST00000442869 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
RCL1-206ENST00000442869 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.32
RCL1-206ENST00000442869 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
RCL1-206ENST00000442869 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
RCL1-206ENST00000442869 MAP3K5Q99683 1374 aa17.08■□□□□ 0.32
RCL1-206ENST00000442869 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
RCL1-206ENST00000442869 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
RCL1-206ENST00000442869 SIK1P57059 783 aa17.07■□□□□ 0.32
RCL1-206ENST00000442869 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
RCL1-206ENST00000442869 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
RCL1-206ENST00000442869 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms