RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 TMEM2Q9UHN6 1383 aa7.64□□□□□ -1.19
C2CD3-207ENST00000442398 SMARCA5O60264 1052 aaPredicted RBP7.64□□□□□ -1.19
C2CD3-207ENST00000442398 ZC3H6P61129 1189 aaKnown RBP7.64□□□□□ -1.19
C2CD3-207ENST00000442398 C1orf141Q5JVX7 400 aa7.64□□□□□ -1.19
C2CD3-207ENST00000442398 PRR36Q9H6K5 1346 aa7.64□□□□□ -1.19
C2CD3-207ENST00000442398 IL16Q14005 1332 aa7.64□□□□□ -1.19
C2CD3-207ENST00000442398 MAP3K19Q56UN5 1328 aa7.64□□□□□ -1.19
C2CD3-207ENST00000442398 NLRP2Q9NX02 1062 aa7.63□□□□□ -1.19
C2CD3-207ENST00000442398 PHF8Q9UPP1 1060 aa7.63□□□□□ -1.19
C2CD3-207ENST00000442398 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
C2CD3-207ENST00000442398 AIMP1Q12904 312 aaKnown RBP7.63□□□□□ -1.19
C2CD3-207ENST00000442398 ROBO2Q9HCK4 1378 aa7.63□□□□□ -1.19
C2CD3-207ENST00000442398 MTHFSDQ2M296 383 aaKnown RBP7.63□□□□□ -1.19
C2CD3-207ENST00000442398 MRPL50Q8N5N7 158 aaKnown RBP7.63□□□□□ -1.19
C2CD3-207ENST00000442398 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
C2CD3-207ENST00000442398 FOXD4L5Q5VV16 416 aaPredicted RBP7.62□□□□□ -1.19
C2CD3-207ENST00000442398 FOXD4L4Q8WXT5 416 aaPredicted RBP7.62□□□□□ -1.19
C2CD3-207ENST00000442398 N4BP2Q86UW6 1770 aaPredicted RBP7.62□□□□□ -1.19
C2CD3-207ENST00000442398 EYA1Q99502 592 aa7.62□□□□□ -1.19
C2CD3-207ENST00000442398 ZBTB40Q9NUA8 1239 aa7.62□□□□□ -1.19
C2CD3-207ENST00000442398 USP35Q9P2H5 1018 aa7.62□□□□□ -1.19
C2CD3-207ENST00000442398 EDC4Q6P2E9 1401 aaKnown RBP7.62□□□□□ -1.19
C2CD3-207ENST00000442398 GNAT3A8MTJ3 354 aa7.62□□□□□ -1.19
C2CD3-207ENST00000442398 GSE1Q14687 1217 aa7.62□□□□□ -1.19
C2CD3-207ENST00000442398 EXOC6BQ9Y2D4 811 aa7.62□□□□□ -1.19
C2CD3-207ENST00000442398 ZNF530Q6P9A1 599 aaPredicted RBP7.61□□□□□ -1.19
C2CD3-207ENST00000442398 GCC1Q96CN9 775 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 FMN2Q9NZ56 1722 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 ANXA1P04083 346 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 CCDC30Q5VVM6 783 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 CCDC9Q9Y3X0 531 aaKnown RBP7.61□□□□□ -1.19
C2CD3-207ENST00000442398 DLG5Q8TDM6 1919 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 ATF3P18847 181 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 MPRIPQ6WCQ1 1025 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 FAM135BQ49AJ0 1406 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 C16orf71Q8IYS4 520 aaPredicted RBP7.61□□□□□ -1.19
C2CD3-207ENST00000442398 MEIS3Q99687 375 aa7.61□□□□□ -1.19
C2CD3-207ENST00000442398 PDE4CQ08493 712 aa7.6□□□□□ -1.19
C2CD3-207ENST00000442398 TSHZ3Q63HK5 1081 aa7.6□□□□□ -1.19
C2CD3-207ENST00000442398 LRRC59Q96AG4 307 aaKnown RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 C9orf78Q9NZ63 289 aaPredicted RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 MAP2P11137 1827 aaKnown RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 DIP2AQ14689 1571 aa7.6□□□□□ -1.19
C2CD3-207ENST00000442398 CPSF1Q10570 1443 aaKnown RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 GOLGA6L22H0YM25 854 aa7.6□□□□□ -1.19
C2CD3-207ENST00000442398 TBX22Q9Y458 520 aa7.6□□□□□ -1.19
C2CD3-207ENST00000442398 MARF1Q9Y4F3 1742 aaKnown RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 CDK12Q9NYV4 1490 aaPredicted RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 UBTFL1P0CB47 393 aaPredicted RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 KCNJ4P48050 445 aa7.6□□□□□ -1.19
C2CD3-207ENST00000442398 HDAC1Q13547 482 aaPredicted RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 FOXD4L6Q3SYB3 417 aaPredicted RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 FOXD4L3Q6VB84 417 aaPredicted RBP7.6□□□□□ -1.19
C2CD3-207ENST00000442398 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
C2CD3-207ENST00000442398 ZBTB7BO15156 539 aaPredicted RBP7.59□□□□□ -1.19
C2CD3-207ENST00000442398 G2E3Q7L622 706 aa7.59□□□□□ -1.19
C2CD3-207ENST00000442398 IL1RAPL2Q9NP60 686 aa7.59□□□□□ -1.19
C2CD3-207ENST00000442398 CHMP3Q9Y3E7 222 aa7.59□□□□□ -1.19
C2CD3-207ENST00000442398 CDC45O75419 566 aa7.59□□□□□ -1.19
C2CD3-207ENST00000442398 GNAI2P04899 355 aa7.59□□□□□ -1.19
C2CD3-207ENST00000442398 RAPGEF4Q8WZA2 1011 aa7.59□□□□□ -1.19
C2CD3-207ENST00000442398 SURF6O75683 361 aaKnown RBP7.59□□□□□ -1.2
C2CD3-207ENST00000442398 MAP4K4O95819 1239 aaPredicted RBP7.59□□□□□ -1.2
C2CD3-207ENST00000442398 NUCB1Q02818 461 aa7.59□□□□□ -1.2
C2CD3-207ENST00000442398 LRRC37A3O60309 1634 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 ORAI2Q96SN7 254 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 ANO2Q9NQ90 1003 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 XRN1Q8IZH2 1706 aaKnown RBP7.58□□□□□ -1.2
C2CD3-207ENST00000442398 TAF7Q15545 349 aaPredicted RBP7.58□□□□□ -1.2
C2CD3-207ENST00000442398 TBC1D32Q96NH3 1257 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 TAOK2Q9UL54 1235 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 PLEKHG3A1L390 1219 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 BTBD11A6QL63 1104 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 FLIIQ13045 1269 aa7.58□□□□□ -1.2
C2CD3-207ENST00000442398 PLEKHO1Q53GL0 409 aaPredicted RBP7.58□□□□□ -1.2
C2CD3-207ENST00000442398 SMC5Q8IY18 1101 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.57□□□□□ -1.2
C2CD3-207ENST00000442398 MYL6BP14649 208 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 MCCP23508 829 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 HOXC9P31274 260 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 CCT4P50991 539 aaKnown RBP7.57□□□□□ -1.2
C2CD3-207ENST00000442398 SIRT1Q96EB6 747 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 TTC21AQ8NDW8 1320 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 SLIT1O75093 1534 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 GNAI3P08754 354 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 INTS3Q68E01 1043 aaKnown RBP7.57□□□□□ -1.2
C2CD3-207ENST00000442398 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 KIAA1211Q6ZU35 1233 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 ARHGAP45Q92619 1136 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 CHMP5Q9NZZ3 219 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 FLT4P35916 1363 aa7.57□□□□□ -1.2
C2CD3-207ENST00000442398 RPAP2Q8IXW5 612 aaPredicted RBP7.56□□□□□ -1.2
C2CD3-207ENST00000442398 CABLES1Q8TDN4 633 aa7.56□□□□□ -1.2
C2CD3-207ENST00000442398 OTUD7AQ8TE49 926 aaPredicted RBP7.56□□□□□ -1.2
C2CD3-207ENST00000442398 ANP32BQ92688 251 aaKnown RBP7.56□□□□□ -1.2
C2CD3-207ENST00000442398 DDX17Q92841 729 aaKnown RBP7.56□□□□□ -1.2
C2CD3-207ENST00000442398 LRRFIP2Q9Y608 721 aaKnown RBP7.56□□□□□ -1.2
C2CD3-207ENST00000442398 AATKQ6ZMQ8 1374 aa7.56□□□□□ -1.2
C2CD3-207ENST00000442398 CHRNA2Q15822 529 aa7.56□□□□□ -1.2
C2CD3-207ENST00000442398 TTC5Q8N0Z6 440 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms