RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 KIAA0232Q92628 1395 aa11.93□□□□□ -0.5
HDAC6-209ENST00000440653 KIF3CO14782 793 aa11.93□□□□□ -0.5
HDAC6-209ENST00000440653 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
HDAC6-209ENST00000440653 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
HDAC6-209ENST00000440653 CCDC27Q2M243 656 aa11.93□□□□□ -0.5
HDAC6-209ENST00000440653 DUSP27Q5VZP5 1158 aa11.93□□□□□ -0.5
HDAC6-209ENST00000440653 LARP1Q6PKG0 1096 aaKnown RBP11.93□□□□□ -0.5
HDAC6-209ENST00000440653 PEAK1Q9H792 1746 aa11.93□□□□□ -0.5
HDAC6-209ENST00000440653 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-209ENST00000440653 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
HDAC6-209ENST00000440653 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
HDAC6-209ENST00000440653 ALS2Q96Q42 1657 aa11.92□□□□□ -0.5
HDAC6-209ENST00000440653 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-209ENST00000440653 HTRA3P83110 453 aa11.92□□□□□ -0.5
HDAC6-209ENST00000440653 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
HDAC6-209ENST00000440653 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
HDAC6-209ENST00000440653 GRIN3BO60391 1043 aa11.91□□□□□ -0.5
HDAC6-209ENST00000440653 MTHFSP49914 203 aa11.91□□□□□ -0.5
HDAC6-209ENST00000440653 EVA1CP58658 441 aa11.91□□□□□ -0.5
HDAC6-209ENST00000440653 SLFN5Q08AF3 891 aa11.91□□□□□ -0.5
HDAC6-209ENST00000440653 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
HDAC6-209ENST00000440653 CDCA7LQ96GN5 454 aa11.91□□□□□ -0.5
HDAC6-209ENST00000440653 PNNQ9H307 717 aaKnown RBP11.91□□□□□ -0.5
HDAC6-209ENST00000440653 SSH2Q76I76 1423 aa11.91□□□□□ -0.5
HDAC6-209ENST00000440653 ADCY9O60503 1353 aa11.91□□□□□ -0.5
HDAC6-209ENST00000440653 OVOS2A0A0G2JMS6 1433 aa11.9□□□□□ -0.5
HDAC6-209ENST00000440653 OVOS2A0A0J9YW53 1432 aa11.9□□□□□ -0.5
HDAC6-209ENST00000440653 APAF1O14727 1248 aa11.9□□□□□ -0.5
HDAC6-209ENST00000440653 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
HDAC6-209ENST00000440653 OVOS2Q6IE36 1432 aa11.9□□□□□ -0.5
HDAC6-209ENST00000440653 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
HDAC6-209ENST00000440653 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
HDAC6-209ENST00000440653 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-209ENST00000440653 B4GALNT3Q6L9W6 998 aa11.89□□□□□ -0.51
HDAC6-209ENST00000440653 CCDC146Q8IYE0 955 aa11.89□□□□□ -0.51
HDAC6-209ENST00000440653 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
HDAC6-209ENST00000440653 WDR63Q8IWG1 891 aa11.88□□□□□ -0.51
HDAC6-209ENST00000440653 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
HDAC6-209ENST00000440653 PARP4Q9UKK3 1724 aaKnown RBP11.88□□□□□ -0.51
HDAC6-209ENST00000440653 FYB1O15117 783 aa11.87□□□□□ -0.51
HDAC6-209ENST00000440653 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-209ENST00000440653 MAPK8IP3Q9UPT6 1336 aa11.86□□□□□ -0.51
HDAC6-209ENST00000440653 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
HDAC6-209ENST00000440653 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
HDAC6-209ENST00000440653 CABP1Q9NZU7 370 aa11.86□□□□□ -0.51
HDAC6-209ENST00000440653 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
HDAC6-209ENST00000440653 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
HDAC6-209ENST00000440653 USP6P35125 1406 aa11.86□□□□□ -0.51
HDAC6-209ENST00000440653 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-209ENST00000440653 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-209ENST00000440653 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
HDAC6-209ENST00000440653 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-209ENST00000440653 GGNBP2Q9H3C7 697 aa11.85□□□□□ -0.51
HDAC6-209ENST00000440653 WDR90Q96KV7 1748 aa11.85□□□□□ -0.51
HDAC6-209ENST00000440653 IL16Q14005 1332 aa11.85□□□□□ -0.51
HDAC6-209ENST00000440653 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-209ENST00000440653 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDAC6-209ENST00000440653 AAMPQ13685 434 aa11.84□□□□□ -0.51
HDAC6-209ENST00000440653 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-209ENST00000440653 NUDT16Q96DE0 195 aaKnown RBP11.84□□□□□ -0.51
HDAC6-209ENST00000440653 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
HDAC6-209ENST00000440653 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
HDAC6-209ENST00000440653 NUTM2GQ5VZR2 741 aa11.83□□□□□ -0.52
HDAC6-209ENST00000440653 EXOC6Q8TAG9 804 aa11.83□□□□□ -0.52
HDAC6-209ENST00000440653 RBM19Q9Y4C8 960 aaKnown RBP11.83□□□□□ -0.52
HDAC6-209ENST00000440653 PIK3C2AO00443 1686 aa11.83□□□□□ -0.52
HDAC6-209ENST00000440653 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
HDAC6-209ENST00000440653 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
HDAC6-209ENST00000440653 NEFMP07197 916 aa11.82□□□□□ -0.52
HDAC6-209ENST00000440653 POLD1P28340 1107 aa11.82□□□□□ -0.52
HDAC6-209ENST00000440653 TTC21AQ8NDW8 1320 aa11.82□□□□□ -0.52
HDAC6-209ENST00000440653 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
HDAC6-209ENST00000440653 PHRF1Q9P1Y6 1649 aaKnown RBP11.82□□□□□ -0.52
HDAC6-209ENST00000440653 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
HDAC6-209ENST00000440653 DDB1Q16531 1140 aa11.81□□□□□ -0.52
HDAC6-209ENST00000440653 COG3Q96JB2 828 aa11.81□□□□□ -0.52
HDAC6-209ENST00000440653 PAPPAQ13219 1627 aa11.81□□□□□ -0.52
HDAC6-209ENST00000440653 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
HDAC6-209ENST00000440653 PLEKHG3A1L390 1219 aa11.8□□□□□ -0.52
HDAC6-209ENST00000440653 TOMM70O94826 608 aa11.8□□□□□ -0.52
HDAC6-209ENST00000440653 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
HDAC6-209ENST00000440653 CRBNQ96SW2 442 aa11.8□□□□□ -0.52
HDAC6-209ENST00000440653 PRR36Q9H6K5 1346 aa11.8□□□□□ -0.52
HDAC6-209ENST00000440653 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
HDAC6-209ENST00000440653 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
HDAC6-209ENST00000440653 FCHSD2O94868 740 aa11.79□□□□□ -0.52
HDAC6-209ENST00000440653 MS4A1P11836 297 aa11.79□□□□□ -0.52
HDAC6-209ENST00000440653 CENPQQ7L2Z9 268 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-209ENST00000440653 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
HDAC6-209ENST00000440653 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
HDAC6-209ENST00000440653 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
HDAC6-209ENST00000440653 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
HDAC6-209ENST00000440653 HSPA1AP0DMV8 641 aaKnown RBP11.78□□□□□ -0.52
HDAC6-209ENST00000440653 HSPA1BP0DMV9 641 aaKnown RBP11.78□□□□□ -0.52
HDAC6-209ENST00000440653 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
HDAC6-209ENST00000440653 LRRC4BQ9NT99 713 aa11.78□□□□□ -0.52
HDAC6-209ENST00000440653 TNS2Q63HR2 1409 aa11.77□□□□□ -0.52
HDAC6-209ENST00000440653 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.53
HDAC6-209ENST00000440653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDAC6-209ENST00000440653 SLC16A10Q8TF71 515 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms