RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 TRDNQ13061 729 aa17.29■□□□□ 0.36
PCNX1-202ENST00000439984 CCDC47Q96A33 483 aaKnown RBP17.29■□□□□ 0.36
PCNX1-202ENST00000439984 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
PCNX1-202ENST00000439984 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
PCNX1-202ENST00000439984 RNF187Q5TA31 235 aaPredicted RBP17.28■□□□□ 0.36
PCNX1-202ENST00000439984 CRACR2AQ9BSW2 395 aa17.28■□□□□ 0.36
PCNX1-202ENST00000439984 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
PCNX1-202ENST00000439984 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
PCNX1-202ENST00000439984 U2AF2P26368 475 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■■□□□ 13.2
PCNX1-202ENST00000439984 SAFBQ15424 915 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCNX1-202ENST00000439984 CFAP100Q494V2 611 aa17.28■□□□□ 0.36
PCNX1-202ENST00000439984 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
PCNX1-202ENST00000439984 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
PCNX1-202ENST00000439984 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.36
PCNX1-202ENST00000439984 CCDC181Q5TID7 509 aa17.27■□□□□ 0.35
PCNX1-202ENST00000439984 CCDC83Q8IWF9 413 aa17.27■□□□□ 0.35
PCNX1-202ENST00000439984 DYDC1Q8WWB3 177 aa17.27■□□□□ 0.35
PCNX1-202ENST00000439984 RSPH14Q9UHP6 348 aa17.27■□□□□ 0.35
PCNX1-202ENST00000439984 CBFA2T2O43439 604 aa17.27■□□□□ 0.35
PCNX1-202ENST00000439984 NCOA1Q15788 1441 aa17.26■□□□□ 0.35
PCNX1-202ENST00000439984 SEC24BO95487 1268 aa17.26■□□□□ 0.35
PCNX1-202ENST00000439984 CT47A1Q5JQC4 288 aaPredicted RBP17.26■□□□□ 0.35
PCNX1-202ENST00000439984 PAXBP1Q9Y5B6 917 aa17.26■□□□□ 0.35
PCNX1-202ENST00000439984 KIF20AO95235 890 aa17.26■□□□□ 0.35
PCNX1-202ENST00000439984 DHX8Q14562 1220 aaKnown RBP17.26■□□□□ 0.35
PCNX1-202ENST00000439984 TWISTNBQ3B726 338 aaPredicted RBP17.26■□□□□ 0.35
PCNX1-202ENST00000439984 COG3Q96JB2 828 aa17.26■□□□□ 0.35
PCNX1-202ENST00000439984 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
PCNX1-202ENST00000439984 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
PCNX1-202ENST00000439984 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
PCNX1-202ENST00000439984 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCNX1-202ENST00000439984 GIMAP6Q6P9H5 292 aa17.26■□□□□ 0.35
PCNX1-202ENST00000439984 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
PCNX1-202ENST00000439984 ZSWIM4Q9H7M6 989 aa17.25■□□□□ 0.35
PCNX1-202ENST00000439984 GOLGA6L7A0A1B0GV03 622 aa17.25■□□□□ 0.35
PCNX1-202ENST00000439984 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
PCNX1-202ENST00000439984 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
PCNX1-202ENST00000439984 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
PCNX1-202ENST00000439984 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
PCNX1-202ENST00000439984 HSP90AB4PQ58FF6 505 aa17.24■□□□□ 0.35
PCNX1-202ENST00000439984 RALYLQ86SE5 291 aaKnown RBP17.24■□□□□ 0.35
PCNX1-202ENST00000439984 DDX11Q96FC9 970 aa17.24■□□□□ 0.35
PCNX1-202ENST00000439984 ARHGAP29Q52LW3 1261 aa17.24■□□□□ 0.35
PCNX1-202ENST00000439984 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
PCNX1-202ENST00000439984 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
PCNX1-202ENST00000439984 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
PCNX1-202ENST00000439984 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
PCNX1-202ENST00000439984 UGGT2Q9NYU1 1516 aa17.23■□□□□ 0.35
PCNX1-202ENST00000439984 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
PCNX1-202ENST00000439984 CWC27Q6UX04 472 aaKnown RBP17.23■□□□□ 0.35
PCNX1-202ENST00000439984 WDR63Q8IWG1 891 aa17.23■□□□□ 0.35
PCNX1-202ENST00000439984 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
PCNX1-202ENST00000439984 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
PCNX1-202ENST00000439984 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
PCNX1-202ENST00000439984 TSC1Q92574 1164 aa17.23■□□□□ 0.35
PCNX1-202ENST00000439984 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
PCNX1-202ENST00000439984 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
PCNX1-202ENST00000439984 TBC1D9Q6ZT07 1266 aa17.22■□□□□ 0.35
PCNX1-202ENST00000439984 GBP3Q9H0R5 595 aa17.22■□□□□ 0.35
PCNX1-202ENST00000439984 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
PCNX1-202ENST00000439984 CCDC186Q7Z3E2 898 aa17.22■□□□□ 0.35
PCNX1-202ENST00000439984 KIF4BQ2VIQ3 1234 aa17.22■□□□□ 0.35
PCNX1-202ENST00000439984 CLASRPQ8N2M8 674 aaKnown RBP17.22■□□□□ 0.35
PCNX1-202ENST00000439984 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
PCNX1-202ENST00000439984 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
PCNX1-202ENST00000439984 ZSCAN12O43309 604 aa17.21■□□□□ 0.35
PCNX1-202ENST00000439984 TTC31Q49AM3 519 aaPredicted RBP17.21■□□□□ 0.35
PCNX1-202ENST00000439984 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
PCNX1-202ENST00000439984 RASSF4Q9H2L5 321 aa17.21■□□□□ 0.35
PCNX1-202ENST00000439984 CFAP43Q8NDM7 1665 aa17.21■□□□□ 0.34
PCNX1-202ENST00000439984 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 WASHC4Q2M389 1173 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 C17orf53Q8N3J3 647 aaPredicted RBP17.2■□□□□ 0.34
PCNX1-202ENST00000439984 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
PCNX1-202ENST00000439984 EPB41L2O43491 1005 aaKnown RBP17.2■□□□□ 0.34
PCNX1-202ENST00000439984 HS1BP3Q53T59 392 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 CFAP45Q9UL16 551 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
PCNX1-202ENST00000439984 TMC6Q7Z403 805 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
PCNX1-202ENST00000439984 GNAI2P04899 355 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 PRM3Q9NNZ6 103 aa17.2■□□□□ 0.34
PCNX1-202ENST00000439984 SMTNL1A8MU46 457 aa17.19■□□□□ 0.34
PCNX1-202ENST00000439984 FAM107BQ9H098 131 aa17.19■□□□□ 0.34
PCNX1-202ENST00000439984 RAI14Q9P0K7 980 aa17.19■□□□□ 0.34
PCNX1-202ENST00000439984 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
PCNX1-202ENST00000439984 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
PCNX1-202ENST00000439984 ZNHIT6Q9NWK9 470 aaKnown RBP17.19■□□□□ 0.34
PCNX1-202ENST00000439984 SCAPERQ9BY12 1400 aa17.19■□□□□ 0.34
PCNX1-202ENST00000439984 ERBINQ96RT1 1412 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 RBSNQ9H1K0 784 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 LRRFIP1Q32MZ4 808 aaKnown RBP17.18■□□□□ 0.34
PCNX1-202ENST00000439984 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 LIG1P18858 919 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 ZNF397Q8NF99 534 aaPredicted RBP17.18■□□□□ 0.34
PCNX1-202ENST00000439984 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms