RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 DIAPH1O60610 1272 aaKnown RBP26.26■■□□□ 1.79
SEMA3B-206ENST00000439487 DDX54Q8TDD1 881 aaKnown RBP26.26■■□□□ 1.79
SEMA3B-206ENST00000439487 CCDC125Q86Z20 511 aa26.25■■□□□ 1.79
SEMA3B-206ENST00000439487 PKD1L3Q7Z443 1732 aa26.25■■□□□ 1.79
SEMA3B-206ENST00000439487 TNS1Q9HBL0 1735 aaKnown RBP26.25■■□□□ 1.79
SEMA3B-206ENST00000439487 TRIM37O94972 964 aa26.24■■□□□ 1.79
SEMA3B-206ENST00000439487 AEBP1Q8IUX7 1158 aa26.23■■□□□ 1.79
SEMA3B-206ENST00000439487 RALBP1Q15311 655 aa26.22■■□□□ 1.79
SEMA3B-206ENST00000439487 SULT6B1Q6IMI4 303 aa26.22■■□□□ 1.79
SEMA3B-206ENST00000439487 CFAP53Q96M91 514 aa26.22■■□□□ 1.79
SEMA3B-206ENST00000439487 SF3B2Q13435 895 aaKnown RBP26.21■■□□□ 1.79
SEMA3B-206ENST00000439487 BCL9O00512 1426 aa26.19■■□□□ 1.78
SEMA3B-206ENST00000439487 DEFB132Q7Z7B7 95 aa26.18■■□□□ 1.78
SEMA3B-206ENST00000439487 U2SURPO15042 1029 aaKnown RBP26.17■■□□□ 1.78
SEMA3B-206ENST00000439487 HMOX1P09601 288 aa26.17■■□□□ 1.78
SEMA3B-206ENST00000439487 ACSBG1Q96GR2 724 aa26.17■■□□□ 1.78
SEMA3B-206ENST00000439487 PTF1AQ7RTS3 328 aa26.16■■□□□ 1.78
SEMA3B-206ENST00000439487 SPG7Q9UQ90 795 aa26.16■■□□□ 1.78
SEMA3B-206ENST00000439487 KDRP35968 1356 aa26.16■■□□□ 1.78
SEMA3B-206ENST00000439487 DOT1LQ8TEK3 1739 aa26.16■■□□□ 1.78
SEMA3B-206ENST00000439487 NHSQ6T4R5 1651 aa26.15■■□□□ 1.78
SEMA3B-206ENST00000439487 PCDH11XQ9BZA7 1347 aa26.15■■□□□ 1.78
SEMA3B-206ENST00000439487 PCDH11YQ9BZA8 1340 aa26.15■■□□□ 1.78
SEMA3B-206ENST00000439487 CYP27B1O15528 508 aa26.15■■□□□ 1.78
SEMA3B-206ENST00000439487 PRKRIP1Q9H875 184 aaPredicted RBP26.14■■□□□ 1.78
SEMA3B-206ENST00000439487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.14■■□□□ 1.78
SEMA3B-206ENST00000439487 KCNQ2O43526 872 aa26.13■■□□□ 1.77
SEMA3B-206ENST00000439487 APBA3O96018 575 aa26.13■■□□□ 1.77
SEMA3B-206ENST00000439487 MYBBP1AQ9BQG0 1328 aaKnown RBP26.13■■□□□ 1.77
SEMA3B-206ENST00000439487 BAG6P46379 1132 aa26.12■■□□□ 1.77
SEMA3B-206ENST00000439487 PLEKHO1Q53GL0 409 aaPredicted RBP26.12■■□□□ 1.77
SEMA3B-206ENST00000439487 BCL11BQ9C0K0 894 aaPredicted RBP26.12■■□□□ 1.77
SEMA3B-206ENST00000439487 NUDCQ9Y266 331 aa26.12■■□□□ 1.77
SEMA3B-206ENST00000439487 EN1Q05925 392 aaPredicted RBP26.11■■□□□ 1.77
SEMA3B-206ENST00000439487 BTAF1O14981 1849 aa26.11■■□□□ 1.77
SEMA3B-206ENST00000439487 ITGB4P16144 1822 aa26.1■■□□□ 1.77
SEMA3B-206ENST00000439487 PLEKHG2Q9H7P9 1386 aa26.09■■□□□ 1.77
SEMA3B-206ENST00000439487 TOGARAM1Q9Y4F4 1720 aa26.08■■□□□ 1.77
SEMA3B-206ENST00000439487 AMOTQ4VCS5 1084 aa26.08■■□□□ 1.77
SEMA3B-206ENST00000439487 IFNL2Q8IZJ0 200 aa26.08■■□□□ 1.77
SEMA3B-206ENST00000439487 VIRMAQ69YN4 1812 aaKnown RBP26.07■■□□□ 1.76
SEMA3B-206ENST00000439487 U2AF1L5P0DN76 240 aaPredicted RBP26.07■■□□□ 1.76
SEMA3B-206ENST00000439487 PHKG2P15735 406 aa26.07■■□□□ 1.76
SEMA3B-206ENST00000439487 U2AF1Q01081 240 aaKnown RBP eCLIP26.07■■□□□ 1.76
SEMA3B-206ENST00000439487 PRIM1P49642 420 aaKnown RBP26.06■■□□□ 1.76
SEMA3B-206ENST00000439487 ZNF530Q6P9A1 599 aaPredicted RBP26.06■■□□□ 1.76
SEMA3B-206ENST00000439487 SYTL4Q96C24 671 aaPredicted RBP26.06■■□□□ 1.76
SEMA3B-206ENST00000439487 NKX1-1Q15270 411 aaPredicted RBP26.05■■□□□ 1.76
SEMA3B-206ENST00000439487 EZH2Q15910 746 aaKnown RBP26.05■■□□□ 1.76
SEMA3B-206ENST00000439487 CAMKK2Q96RR4 588 aa26.04■■□□□ 1.76
SEMA3B-206ENST00000439487 RGPD3A6NKT7 1758 aaPredicted RBP26.02■■□□□ 1.76
SEMA3B-206ENST00000439487 RGPD4Q7Z3J3 1758 aa26.02■■□□□ 1.76
SEMA3B-206ENST00000439487 RSPH6AQ9H0K4 717 aa26.02■■□□□ 1.76
SEMA3B-206ENST00000439487 PRKAR2BP31323 418 aa26.01■■□□□ 1.75
SEMA3B-206ENST00000439487 RREB1Q92766 1687 aa26.01■■□□□ 1.75
SEMA3B-206ENST00000439487 PLSCR1O15162 318 aa26■■□□□ 1.75
SEMA3B-206ENST00000439487 MTHFSDQ2M296 383 aaKnown RBP26■■□□□ 1.75
SEMA3B-206ENST00000439487 C1orf141Q5JVX7 400 aa26■■□□□ 1.75
SEMA3B-206ENST00000439487 SCN11AQ9UI33 1791 aa26■■□□□ 1.75
SEMA3B-206ENST00000439487 ANP32CO43423 234 aa25.98■■□□□ 1.75
SEMA3B-206ENST00000439487 FCHSD2O94868 740 aa25.98■■□□□ 1.75
SEMA3B-206ENST00000439487 NUP188Q5SRE5 1749 aa25.97■■□□□ 1.75
SEMA3B-206ENST00000439487 HSP90AB1P08238 724 aaKnown RBP25.97■■□□□ 1.75
SEMA3B-206ENST00000439487 MPRIPQ6WCQ1 1025 aa25.97■■□□□ 1.75
SEMA3B-206ENST00000439487 PHACTR3Q96KR7 559 aa25.97■■□□□ 1.75
SEMA3B-206ENST00000439487 AKAP4Q5JQC9 854 aa25.96■■□□□ 1.75
SEMA3B-206ENST00000439487 DCAF5Q96JK2 942 aa25.95■■□□□ 1.74
SEMA3B-206ENST00000439487 KDM6AO15550 1401 aaPredicted RBP25.95■■□□□ 1.74
SEMA3B-206ENST00000439487 PROM2Q8N271 834 aa25.93■■□□□ 1.74
SEMA3B-206ENST00000439487 PIGBQ92521 554 aa25.93■■□□□ 1.74
SEMA3B-206ENST00000439487 LY75O60449 1722 aa25.93■■□□□ 1.74
SEMA3B-206ENST00000439487 DLG5Q8TDM6 1919 aa25.92■■□□□ 1.74
SEMA3B-206ENST00000439487 TXNRD1Q16881 649 aa25.92■■□□□ 1.74
SEMA3B-206ENST00000439487 GAS2L2Q8NHY3 880 aa25.92■■□□□ 1.74
SEMA3B-206ENST00000439487 ERVV-2B6SEH9 535 aa25.91■■□□□ 1.74
SEMA3B-206ENST00000439487 TMOD3Q9NYL9 352 aa25.91■■□□□ 1.74
SEMA3B-206ENST00000439487 CCDC184Q52MB2 194 aa25.9■■□□□ 1.74
SEMA3B-206ENST00000439487 LGR6Q9HBX8 967 aa25.9■■□□□ 1.74
SEMA3B-206ENST00000439487 ADAMTS7Q9UKP4 1686 aa25.88■■□□□ 1.73
SEMA3B-206ENST00000439487 RNMTO43148 476 aaKnown RBP25.88■■□□□ 1.73
SEMA3B-206ENST00000439487 CABP4P57796 275 aa25.88■■□□□ 1.73
SEMA3B-206ENST00000439487 WDR43Q15061 677 aaKnown RBP eCLIP25.88■■□□□ 1.73
SEMA3B-206ENST00000439487 PLEKHF1Q96S99 279 aa25.88■■□□□ 1.73
SEMA3B-206ENST00000439487 MAP3K5Q99683 1374 aa25.87■■□□□ 1.73
SEMA3B-206ENST00000439487 GNAT3A8MTJ3 354 aa25.86■■□□□ 1.73
SEMA3B-206ENST00000439487 PNNQ9H307 717 aaKnown RBP25.86■■□□□ 1.73
SEMA3B-206ENST00000439487 NEFMP07197 916 aa25.85■■□□□ 1.73
SEMA3B-206ENST00000439487 NFATC2IPQ8NCF5 419 aa25.84■■□□□ 1.73
SEMA3B-206ENST00000439487 ASAP1Q9ULH1 1129 aa25.84■■□□□ 1.73
SEMA3B-206ENST00000439487 ADAMTS8Q9UP79 889 aa25.84■■□□□ 1.73
SEMA3B-206ENST00000439487 PALLDQ8WX93 1383 aa25.83■■□□□ 1.73
SEMA3B-206ENST00000439487 KCNQ4P56696 695 aa25.83■■□□□ 1.73
SEMA3B-206ENST00000439487 SMARCC1Q92922 1105 aaPredicted RBP25.83■■□□□ 1.73
SEMA3B-206ENST00000439487 LRRC4BQ9NT99 713 aa25.83■■□□□ 1.73
SEMA3B-206ENST00000439487 TAF1LQ8IZX4 1826 aa25.82■■□□□ 1.72
SEMA3B-206ENST00000439487 NBPF14Q5TI25 921 aa25.82■■□□□ 1.72
SEMA3B-206ENST00000439487 IL17REQ8NFR9 667 aa25.82■■□□□ 1.72
SEMA3B-206ENST00000439487 SLC52A2Q9HAB3 445 aa25.82■■□□□ 1.72
SEMA3B-206ENST00000439487 ATG3Q9NT62 314 aa25.82■■□□□ 1.72
SEMA3B-206ENST00000439487 MAPK8IP3Q9UPT6 1336 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms