RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 LTN1O94822 1766 aa18.73■□□□□ 0.59
GARNL3-206ENST00000439286 HMGB2P26583 209 aaKnown RBP18.73■□□□□ 0.59
GARNL3-206ENST00000439286 ARXQ96QS3 562 aa18.73■□□□□ 0.59
GARNL3-206ENST00000439286 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
GARNL3-206ENST00000439286 INSRP06213 1382 aa18.72■□□□□ 0.59
GARNL3-206ENST00000439286 FLT4P35916 1363 aa18.72■□□□□ 0.59
GARNL3-206ENST00000439286 KIF24Q5T7B8 1368 aa18.72■□□□□ 0.59
GARNL3-206ENST00000439286 ZNF827Q17R98 1081 aa18.72■□□□□ 0.59
GARNL3-206ENST00000439286 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
GARNL3-206ENST00000439286 CARD14Q9BXL6 1004 aa18.72■□□□□ 0.59
GARNL3-206ENST00000439286 FHDC1Q9C0D6 1143 aaPredicted RBP18.72■□□□□ 0.59
GARNL3-206ENST00000439286 NHSQ6T4R5 1651 aa18.72■□□□□ 0.59
GARNL3-206ENST00000439286 POLD1P28340 1107 aa18.71■□□□□ 0.59
GARNL3-206ENST00000439286 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
GARNL3-206ENST00000439286 SYT17Q9BSW7 474 aa18.71■□□□□ 0.59
GARNL3-206ENST00000439286 NSD3Q9BZ95 1437 aa18.7■□□□□ 0.58
GARNL3-206ENST00000439286 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
GARNL3-206ENST00000439286 PCDH11XQ9BZA7 1347 aa18.7■□□□□ 0.58
GARNL3-206ENST00000439286 PCDH11YQ9BZA8 1340 aa18.7■□□□□ 0.58
GARNL3-206ENST00000439286 MEGF6O75095 1541 aa18.69■□□□□ 0.58
GARNL3-206ENST00000439286 MSH5O43196 834 aa18.68■□□□□ 0.58
GARNL3-206ENST00000439286 KCNQ4P56696 695 aa18.68■□□□□ 0.58
GARNL3-206ENST00000439286 EMILIN1Q9Y6C2 1016 aa18.68■□□□□ 0.58
GARNL3-206ENST00000439286 SGIP1Q9BQI5 828 aa18.67■□□□□ 0.58
GARNL3-206ENST00000439286 FAM208AQ9UK61 1670 aaKnown RBP18.66■□□□□ 0.58
GARNL3-206ENST00000439286 EIF4G2P78344 907 aaKnown RBP eCLIP18.66■□□□□ 0.58
GARNL3-206ENST00000439286 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
GARNL3-206ENST00000439286 SPG7Q9UQ90 795 aa18.66■□□□□ 0.58
GARNL3-206ENST00000439286 CASZ1Q86V15 1759 aa18.65■□□□□ 0.58
GARNL3-206ENST00000439286 MPRIPQ6WCQ1 1025 aa18.65■□□□□ 0.58
GARNL3-206ENST00000439286 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
GARNL3-206ENST00000439286 WASHC2AQ641Q2 1341 aa18.64■□□□□ 0.57
GARNL3-206ENST00000439286 PNPLA7Q6ZV29 1317 aa18.64■□□□□ 0.57
GARNL3-206ENST00000439286 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
GARNL3-206ENST00000439286 NSD2O96028 1365 aa18.63■□□□□ 0.57
GARNL3-206ENST00000439286 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
GARNL3-206ENST00000439286 CYP27B1O15528 508 aa18.61■□□□□ 0.57
GARNL3-206ENST00000439286 GPR162Q16538 588 aa18.61■□□□□ 0.57
GARNL3-206ENST00000439286 BTAF1O14981 1849 aa18.6■□□□□ 0.57
GARNL3-206ENST00000439286 FLAD1Q8NFF5 587 aa18.6■□□□□ 0.57
GARNL3-206ENST00000439286 EYA1Q99502 592 aa18.6■□□□□ 0.57
GARNL3-206ENST00000439286 POLKQ9UBT6 870 aa18.6■□□□□ 0.57
GARNL3-206ENST00000439286 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
GARNL3-206ENST00000439286 PALLDQ8WX93 1383 aa18.58■□□□□ 0.57
GARNL3-206ENST00000439286 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
GARNL3-206ENST00000439286 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
GARNL3-206ENST00000439286 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
GARNL3-206ENST00000439286 PANK3Q9H999 370 aa18.58■□□□□ 0.56
GARNL3-206ENST00000439286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.58■□□□□ 0.56
GARNL3-206ENST00000439286 PAPPAQ13219 1627 aa18.58■□□□□ 0.56
GARNL3-206ENST00000439286 MYOM1P52179 1685 aa18.57■□□□□ 0.56
GARNL3-206ENST00000439286 IFNL2Q8IZJ0 200 aa18.57■□□□□ 0.56
GARNL3-206ENST00000439286 NKX1-1Q15270 411 aaPredicted RBP18.56■□□□□ 0.56
GARNL3-206ENST00000439286 AK7Q96M32 723 aa18.56■□□□□ 0.56
GARNL3-206ENST00000439286 TMOD3Q9NYL9 352 aa18.56■□□□□ 0.56
GARNL3-206ENST00000439286 PIGBQ92521 554 aa18.55■□□□□ 0.56
GARNL3-206ENST00000439286 EIF4A2Q14240 407 aaKnown RBP18.54■□□□□ 0.56
GARNL3-206ENST00000439286 MORC1Q86VD1 984 aa18.54■□□□□ 0.56
GARNL3-206ENST00000439286 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
GARNL3-206ENST00000439286 PHKG2P15735 406 aa18.52■□□□□ 0.56
GARNL3-206ENST00000439286 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
GARNL3-206ENST00000439286 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.55
GARNL3-206ENST00000439286 LOC102724428A0A0B4J2F2 783 aa18.51■□□□□ 0.55
GARNL3-206ENST00000439286 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
GARNL3-206ENST00000439286 SIK1P57059 783 aa18.51■□□□□ 0.55
GARNL3-206ENST00000439286 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
GARNL3-206ENST00000439286 ZNF784Q8NCA9 323 aaPredicted RBP18.51■□□□□ 0.55
GARNL3-206ENST00000439286 KIF20BQ96Q89 1820 aa18.51■□□□□ 0.55
GARNL3-206ENST00000439286 KAT6BQ8WYB5 2073 aa18.5■□□□□ 0.55
GARNL3-206ENST00000439286 PHF14O94880 888 aa18.5■□□□□ 0.55
GARNL3-206ENST00000439286 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
GARNL3-206ENST00000439286 GRIN3BO60391 1043 aa18.49■□□□□ 0.55
GARNL3-206ENST00000439286 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
GARNL3-206ENST00000439286 NLGN2Q8NFZ4 835 aa18.49■□□□□ 0.55
GARNL3-206ENST00000439286 RGPD2P0DJD1 1756 aa18.48■□□□□ 0.55
GARNL3-206ENST00000439286 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
GARNL3-206ENST00000439286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.47■□□□□ 0.55
GARNL3-206ENST00000439286 SSFA2P28290 1259 aa18.47■□□□□ 0.55
GARNL3-206ENST00000439286 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
GARNL3-206ENST00000439286 IGSF1Q8N6C5 1336 aa18.47■□□□□ 0.55
GARNL3-206ENST00000439286 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
GARNL3-206ENST00000439286 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
GARNL3-206ENST00000439286 DCAF5Q96JK2 942 aa18.46■□□□□ 0.55
GARNL3-206ENST00000439286 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
GARNL3-206ENST00000439286 SHANK3Q9BYB0 1731 aa18.46■□□□□ 0.55
GARNL3-206ENST00000439286 GNPATO15228 680 aa18.45■□□□□ 0.54
GARNL3-206ENST00000439286 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
GARNL3-206ENST00000439286 ATG3Q9NT62 314 aa18.45■□□□□ 0.54
GARNL3-206ENST00000439286 CABP4P57796 275 aa18.44■□□□□ 0.54
GARNL3-206ENST00000439286 ZNF530Q6P9A1 599 aaPredicted RBP18.44■□□□□ 0.54
GARNL3-206ENST00000439286 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
GARNL3-206ENST00000439286 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
GARNL3-206ENST00000439286 LY75O60449 1722 aa18.43■□□□□ 0.54
GARNL3-206ENST00000439286 MTHFSP49914 203 aa18.43■□□□□ 0.54
GARNL3-206ENST00000439286 ITPK1Q13572 414 aa18.41■□□□□ 0.54
GARNL3-206ENST00000439286 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
GARNL3-206ENST00000439286 RTCBQ9Y3I0 505 aaKnown RBP18.41■□□□□ 0.54
GARNL3-206ENST00000439286 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
GARNL3-206ENST00000439286 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
GARNL3-206ENST00000439286 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms