RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MEGF6O75095 1541 aa25.53■■□□□ 1.68
AC004540.1-201ENST00000439120 SLC15A2Q16348 729 aa25.52■■□□□ 1.68
AC004540.1-201ENST00000439120 USHBP1Q8N6Y0 703 aa25.52■■□□□ 1.68
AC004540.1-201ENST00000439120 CGNL1Q0VF96 1302 aa25.52■■□□□ 1.68
AC004540.1-201ENST00000439120 HSP90AB2PQ58FF8 381 aa25.51■■□□□ 1.67
AC004540.1-201ENST00000439120 DOT1LQ8TEK3 1739 aa25.5■■□□□ 1.67
AC004540.1-201ENST00000439120 SHANK3Q9BYB0 1731 aa25.49■■□□□ 1.67
AC004540.1-201ENST00000439120 PPM1GO15355 546 aaPredicted RBP25.49■■□□□ 1.67
AC004540.1-201ENST00000439120 TATP17735 454 aaPredicted RBP25.49■■□□□ 1.67
AC004540.1-201ENST00000439120 ZBTB7AO95365 584 aa25.48■■□□□ 1.67
AC004540.1-201ENST00000439120 EMILIN1Q9Y6C2 1016 aa25.48■■□□□ 1.67
AC004540.1-201ENST00000439120 HSPA5P11021 654 aaKnown RBP25.47■■□□□ 1.67
AC004540.1-201ENST00000439120 PDGFDQ9GZP0 370 aaPredicted RBP25.47■■□□□ 1.67
AC004540.1-201ENST00000439120 PRIM1P49642 420 aaKnown RBP25.46■■□□□ 1.67
AC004540.1-201ENST00000439120 PAPPAQ13219 1627 aa25.44■■□□□ 1.66
AC004540.1-201ENST00000439120 SLC27A3Q5K4L6 730 aa25.43■■□□□ 1.66
AC004540.1-201ENST00000439120 ATF5Q9Y2D1 282 aaPredicted RBP25.43■■□□□ 1.66
AC004540.1-201ENST00000439120 PCDH11XQ9BZA7 1347 aa25.42■■□□□ 1.66
AC004540.1-201ENST00000439120 PCDH11YQ9BZA8 1340 aa25.42■■□□□ 1.66
AC004540.1-201ENST00000439120 DCAF8L1A6NGE4 600 aa25.42■■□□□ 1.66
AC004540.1-201ENST00000439120 ANKRD26Q9UPS8 1709 aa25.42■■□□□ 1.66
AC004540.1-201ENST00000439120 MAP2P11137 1827 aaKnown RBP25.42■■□□□ 1.66
AC004540.1-201ENST00000439120 MTFR1LQ9H019 292 aa25.41■■□□□ 1.66
AC004540.1-201ENST00000439120 LRRC4BQ9NT99 713 aa25.41■■□□□ 1.66
AC004540.1-201ENST00000439120 WASHC2AQ641Q2 1341 aa25.38■■□□□ 1.65
AC004540.1-201ENST00000439120 TNNT2P45379 298 aaPredicted RBP25.38■■□□□ 1.65
AC004540.1-201ENST00000439120 ZNF827Q17R98 1081 aa25.38■■□□□ 1.65
AC004540.1-201ENST00000439120 NSD2O96028 1365 aa25.37■■□□□ 1.65
AC004540.1-201ENST00000439120 PTGER2P43116 358 aa25.36■■□□□ 1.65
AC004540.1-201ENST00000439120 PANK3Q9H999 370 aa25.36■■□□□ 1.65
AC004540.1-201ENST00000439120 LY75O60449 1722 aa25.36■■□□□ 1.65
AC004540.1-201ENST00000439120 POLKQ9UBT6 870 aa25.35■■□□□ 1.65
AC004540.1-201ENST00000439120 AKT1S1Q96B36 256 aa25.34■■□□□ 1.65
AC004540.1-201ENST00000439120 CCNL1Q9UK58 526 aaPredicted RBP25.34■■□□□ 1.65
AC004540.1-201ENST00000439120 KCNQ4P56696 695 aa25.33■■□□□ 1.65
AC004540.1-201ENST00000439120 PKD1L3Q7Z443 1732 aa25.33■■□□□ 1.65
AC004540.1-201ENST00000439120 TFCP2L1Q9NZI6 479 aa25.33■■□□□ 1.65
AC004540.1-201ENST00000439120 SPG7Q9UQ90 795 aa25.33■■□□□ 1.65
AC004540.1-201ENST00000439120 QSER1Q2KHR3 1735 aa25.32■■□□□ 1.64
AC004540.1-201ENST00000439120 CYP27B1O15528 508 aa25.31■■□□□ 1.64
AC004540.1-201ENST00000439120 EYA1Q99502 592 aa25.31■■□□□ 1.64
AC004540.1-201ENST00000439120 NCAPD2Q15021 1401 aa25.3■■□□□ 1.64
AC004540.1-201ENST00000439120 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
AC004540.1-201ENST00000439120 SLC16A10Q8TF71 515 aa25.28■■□□□ 1.64
AC004540.1-201ENST00000439120 HMGB2P26583 209 aaKnown RBP25.27■■□□□ 1.64
AC004540.1-201ENST00000439120 EIF4A2Q14240 407 aaKnown RBP25.27■■□□□ 1.64
AC004540.1-201ENST00000439120 ARXQ96QS3 562 aa25.27■■□□□ 1.64
AC004540.1-201ENST00000439120 FHDC1Q9C0D6 1143 aaPredicted RBP25.27■■□□□ 1.64
AC004540.1-201ENST00000439120 KNSTRNQ9Y448 316 aa25.27■■□□□ 1.64
AC004540.1-201ENST00000439120 PNPLA7Q6ZV29 1317 aa25.27■■□□□ 1.64
AC004540.1-201ENST00000439120 TUBGCP6Q96RT7 1819 aa25.26■■□□□ 1.63
AC004540.1-201ENST00000439120 MORC1Q86VD1 984 aa25.26■■□□□ 1.63
AC004540.1-201ENST00000439120 SGIP1Q9BQI5 828 aa25.26■■□□□ 1.63
AC004540.1-201ENST00000439120 TOGARAM1Q9Y4F4 1720 aa25.26■■□□□ 1.63
AC004540.1-201ENST00000439120 ITGB4P16144 1822 aa25.26■■□□□ 1.63
AC004540.1-201ENST00000439120 POLD1P28340 1107 aa25.25■■□□□ 1.63
AC004540.1-201ENST00000439120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.25■■□□□ 1.63
AC004540.1-201ENST00000439120 PALLDQ8WX93 1383 aa25.25■■□□□ 1.63
AC004540.1-201ENST00000439120 MSH5O43196 834 aa25.24■■□□□ 1.63
AC004540.1-201ENST00000439120 SMARCC1Q92922 1105 aaPredicted RBP25.24■■□□□ 1.63
AC004540.1-201ENST00000439120 C5P01031 1676 aa25.23■■□□□ 1.63
AC004540.1-201ENST00000439120 YY1P25490 414 aa25.23■■□□□ 1.63
AC004540.1-201ENST00000439120 SYT17Q9BSW7 474 aa25.23■■□□□ 1.63
AC004540.1-201ENST00000439120 NKX1-1Q15270 411 aaPredicted RBP25.22■■□□□ 1.63
AC004540.1-201ENST00000439120 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
AC004540.1-201ENST00000439120 TMOD3Q9NYL9 352 aa25.2■■□□□ 1.62
AC004540.1-201ENST00000439120 IGSF1Q8N6C5 1336 aa25.19■■□□□ 1.62
AC004540.1-201ENST00000439120 KLHL34Q8N239 644 aa25.19■■□□□ 1.62
AC004540.1-201ENST00000439120 PIGBQ92521 554 aa25.19■■□□□ 1.62
AC004540.1-201ENST00000439120 PLEKHG2Q9H7P9 1386 aa25.18■■□□□ 1.62
AC004540.1-201ENST00000439120 PHKG2P15735 406 aa25.18■■□□□ 1.62
AC004540.1-201ENST00000439120 KIF7Q2M1P5 1343 aa25.17■■□□□ 1.62
AC004540.1-201ENST00000439120 TAF1LQ8IZX4 1826 aa25.17■■□□□ 1.62
AC004540.1-201ENST00000439120 MAP3K5Q99683 1374 aa25.16■■□□□ 1.62
AC004540.1-201ENST00000439120 COL23A1Q86Y22 540 aaPredicted RBP25.15■■□□□ 1.62
AC004540.1-201ENST00000439120 AK7Q96M32 723 aa25.15■■□□□ 1.62
AC004540.1-201ENST00000439120 COL24A1Q17RW2 1714 aa25.15■■□□□ 1.62
AC004540.1-201ENST00000439120 PLEKHO1Q53GL0 409 aaPredicted RBP25.14■■□□□ 1.62
AC004540.1-201ENST00000439120 FLAD1Q8NFF5 587 aa25.14■■□□□ 1.62
AC004540.1-201ENST00000439120 C4BP0C0L5 1744 aa25.13■■□□□ 1.61
AC004540.1-201ENST00000439120 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
AC004540.1-201ENST00000439120 AMOTQ4VCS5 1084 aa25.11■■□□□ 1.61
AC004540.1-201ENST00000439120 LOC102724428A0A0B4J2F2 783 aa25.1■■□□□ 1.61
AC004540.1-201ENST00000439120 SIK1P57059 783 aa25.1■■□□□ 1.61
AC004540.1-201ENST00000439120 AMER1Q5JTC6 1135 aaPredicted RBP25.1■■□□□ 1.61
AC004540.1-201ENST00000439120 ZNF530Q6P9A1 599 aaPredicted RBP25.1■■□□□ 1.61
AC004540.1-201ENST00000439120 MSL1Q68DK7 614 aa25.09■■□□□ 1.61
AC004540.1-201ENST00000439120 ASAP1Q9ULH1 1129 aa25.09■■□□□ 1.61
AC004540.1-201ENST00000439120 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.61
AC004540.1-201ENST00000439120 DCAF5Q96JK2 942 aa25.08■■□□□ 1.61
AC004540.1-201ENST00000439120 PHF14O94880 888 aa25.07■■□□□ 1.6
AC004540.1-201ENST00000439120 ATP6V1AP38606 617 aa25.07■■□□□ 1.6
AC004540.1-201ENST00000439120 GPR162Q16538 588 aa25.07■■□□□ 1.6
AC004540.1-201ENST00000439120 SULT6B1Q6IMI4 303 aa25.07■■□□□ 1.6
AC004540.1-201ENST00000439120 AEBP1Q8IUX7 1158 aa25.07■■□□□ 1.6
AC004540.1-201ENST00000439120 ERVV-2B6SEH9 535 aa25.06■■□□□ 1.6
AC004540.1-201ENST00000439120 CC2D1BQ5T0F9 858 aaKnown RBP25.05■■□□□ 1.6
AC004540.1-201ENST00000439120 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
AC004540.1-201ENST00000439120 ATG3Q9NT62 314 aa25.05■■□□□ 1.6
AC004540.1-201ENST00000439120 UBR3Q6ZT12 1888 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms